BioLiP

PDB

BioLiP

PDB CCD ID:

R10

Number of entries in BioLiP:

Chemical formula:

C5 H11 O9 P

InChI:

InChI=1S/C5H11O9P/c6-2(1-14-15(11,12)13)3(7)4(8)5(9)10/h2-4,6-8H,1H2,(H,9,10)(H2,11,12,13)/t2-,3-,4-/m1/s1

InChIKey:

HNECGPFIYSOYHF-BXXZVTAOSA-N

SMILES:

Software	SMILES
CACTVS 3.341	O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@@H](O)C(O)=O
ACDLabs 10.04	O=P(O)(O)OCC(O)C(O)C(O)C(=O)O
CACTVS 3.341	O[CH](CO[P](O)(O)=O)[CH](O)[CH](O)C(O)=O
OpenEye OEToolkits 1.5.0	C([C@H]([C@H]([C@H](C(=O)O)O)O)O)OP(=O)(O)O
OpenEye OEToolkits 1.5.0	C(C(C(C(C(=O)O)O)O)O)OP(=O)(O)O

Name:

5-O-phosphono-D-ribonic acid

ZINC:

ZINC000012502993

Reference:

Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).

Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).