BioLiP

PDB

BioLiP

PDB CCD ID:

XYF

Number of entries in BioLiP:

Chemical formula:

C5 H8 F O5

InChI:

InChI=1S/C5H8FO5/c6-4-2(8)1(7)3(9)5(10)11-4/h1-5,7-9H/q-1/t1-,2-,3+,4-,5?/m0/s1

InChIKey:

CSWSGZBYLQUXQI-ZAMRNKCBSA-N

SMILES:

Software	SMILES
OpenEye OEToolkits 1.5.0	[C@H]1([C@H]([C@@H](O[C@@H]([C@H]1O)F)[O-])O)O
ACDLabs 10.04	[O-]C1OC(F)C(O)C(O)C1O
CACTVS 3.341	O[C@H]1[C@H]([O-])O[C@H](F)[C@@H](O)[C@@H]1O
OpenEye OEToolkits 1.5.0	C1(C(C(OC(C1O)F)[O-])O)O
CACTVS 3.341	O[CH]1[CH]([O-])O[CH](F)[CH](O)[CH]1O

Name:

5(R)-fluoro-beta-D-xylopyranose;
5(R)-fluoro-beta-D-xylose;
5(R)-fluoro-D-xylose;
5(R)-fluoro-xylose

DrugBank:

DB03586

Reference:

Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).

Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).