| >O60477 (376 residues) MNWRFVELLYFLFIWGRISVQPSHQEPAGTDQHVSKEFDWLISDRGPFHHSRSYLSFVER HRQGFTTRYKIYREFARWKVRNTAIERRDLVRHPVPLMPEFQRSIRLLGRRPTTQQFIDT IIKKYGTHLLISATLGGEEALTMYMDKSRLDRKSGNATQSVEALHQLASSYFVDRDGTMR RLHEIQISTGAIKVTETRTGPLGCNSYDNLDSVSSVLLQSTESKLHLQGLQIIFPQYLQE KFVQSALSYIMCNGEGEYLCQNSQCRCQCAEEFPQCNCPITDIQIMEYTLANMAKSWAEA YKDLENSDEFKSFMKRLPSNHFLTIGSIHQHWGNDWDLQNRYKLLQSATEAQRQKIQRTA RKLFGLSVRCRHNPNH |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | MNWRFVELLYFLFIWGRISVQPSHQEPAGTDQHVSKEFDWLISDRGPFHHSRSYLSFVERHRQGFTTRYKIYREFARWKVRNTAIERRDLVRHPVPLMPEFQRSIRLLGRRPTTQQFIDTIIKKYGTHLLISATLGGEEALTMYMDKSRLDRKSGNATQSVEALHQLASSYFVDRDGTMRRLHEIQISTGAIKVTETRTGPLGCNSYDNLDSVSSVLLQSTESKLHLQGLQIIFPQYLQEKFVQSALSYIMCNGEGEYLCQNSQCRCQCAEEFPQCNCPITDIQIMEYTLANMAKSWAEAYKDLENSDEFKSFMKRLPSNHFLTIGSIHQHWGNDWDLQNRYKLLQSATEAQRQKIQRTARKLFGLSVRCRHNPNH |
| Prediction | CCHHHHHHHHHHHHHHHHHCCSCCCCCCCCCCCCCCCCCSSSCCCCCCCCCHHHHHHHHHHHHCCSSSSSSSSCCCCCSHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHSCCCCCCSSSSSSSCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCSSSSSSCCCCCCCCCCCCCCCCHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCSSSSSSCCCSSSSCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC |
| Confidence | 9424999999999988631101112456667788877443551788755687999999998625416788874122100214566665403688888927878778751466167777899999744421101347815899983606652013775144999999987732673368999999987524058773367887888767644201101128403455555899949999999999998872237871699828955786599998889998999999999999999999998988632999999985871111567899999833667999999999999999999999999998875540469899 |
| H:Helix; S:Strand; C:Coil | |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | MNWRFVELLYFLFIWGRISVQPSHQEPAGTDQHVSKEFDWLISDRGPFHHSRSYLSFVERHRQGFTTRYKIYREFARWKVRNTAIERRDLVRHPVPLMPEFQRSIRLLGRRPTTQQFIDTIIKKYGTHLLISATLGGEEALTMYMDKSRLDRKSGNATQSVEALHQLASSYFVDRDGTMRRLHEIQISTGAIKVTETRTGPLGCNSYDNLDSVSSVLLQSTESKLHLQGLQIIFPQYLQEKFVQSALSYIMCNGEGEYLCQNSQCRCQCAEEFPQCNCPITDIQIMEYTLANMAKSWAEAYKDLENSDEFKSFMKRLPSNHFLTIGSIHQHWGNDWDLQNRYKLLQSATEAQRQKIQRTARKLFGLSVRCRHNPNH |
| Prediction | 6312001000000000100021234444346642433011002341214404401501431453131103014313403045221433432523130244025201101332325411530044103300121324232000000336405544543431141035112321143631053035132332204034344231303434314212111241362403031012000410363004100110003340210046440104046612602013420430351044025104422541452640340044023421031210231032434034105403410440253034003301300430464388 |
| Values range from 0 (buried residue) to 8 (highly exposed residue) | |
| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SS Seq | CCHHHHHHHHHHHHHHHHHCCSCCCCCCCCCCCCCCCCCSSSCCCCCCCCCHHHHHHHHHHHHCCSSSSSSSSCCCCCSHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHSCCCCCCSSSSSSSCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCSSSSSSCCCCCCCCCCCCCCCCHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCSSSSSSCCCSSSSCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC MNWRFVELLYFLFIWGRISVQPSHQEPAGTDQHVSKEFDWLISDRGPFHHSRSYLSFVERHRQGFTTRYKIYREFARWKVRNTAIERRDLVRHPVPLMPEFQRSIRLLGRRPTTQQFIDTIIKKYGTHLLISATLGGEEALTMYMDKSRLDRKSGNATQSVEALHQLASSYFVDRDGTMRRLHEIQISTGAIKVTETRTGPLGCNSYDNLDSVSSVLLQSTESKLHLQGLQIIFPQYLQEKFVQSALSYIMCNGEGEYLCQNSQCRCQCAEEFPQCNCPITDIQIMEYTLANMAKSWAEAYKDLENSDEFKSFMKRLPSNHFLTIGSIHQHWGNDWDLQNRYKLLQSATEAQRQKIQRTARKLFGLSVRCRHNPNH | |||||||||||||||||||
| 1 | 3t5oA | 0.12 | 0.11 | 3.98 | 1.14 | SPARKS-K | GGICKTVKSSRTSNPYRVPANLENVGFEVQTAEDDLKTDFYSSKRSENINHNSFKQAIQASHK---KDSSFIRIHKVMKVLNFTTK-----AKDLHLSDVFLKALNHLPLEYNS-ALYSRIFDDFGTHYFTSGSLGGVYDLLYQFSSEELKNSGLTEEEAKHCVRIETKKRVLFAKTTNKLSEKHEGSFIQGAISLIRGGRWLESVKENPAVIDFELANIPCAVTKRNNLRKALQEYAAKF---DPCQCAPCPNNGRPTLSGTECLCVCQSGTYGENCEKQSPDYKSNA---VDGQWGCWSSWSTCDATYKRSRTRECNNPAPQRGGKRCEGEKRQEEDCTPCINDDEEDSGCPQPVPPENGFIRNEKQLYLVGED | |||||||||||||
| 2 | 3ojyB | 0.16 | 0.10 | 3.27 | 1.50 | CNFpred | ----------------------------------------------------RGKHYIRRTKRFSHTKSVFLHARSDLEVAHYKLKPR-----SLMLHYEFLQRVKRLPLEYS-YGEYRDLFRDFGTHYITEAVLGGIYEYTLVMNKEAMERGDYTLNNVHACAK-----SVGKCRGILNEIKDRNKMMVEDLVVLVRGGAWGDAVQYNPAIIKVKVEP-AYSSTVRQNMKQALEEFQKEVS---SCHCAPCQGNGVPVLKGSRCDCICPVGSQGLACEVSYR-----KNTPIDGKWNCWSN-------------------------------------------------------------------------- | |||||||||||||
| 3 | 2pffB | 0.07 | 0.06 | 2.70 | 1.05 | MapAlign | FFVSVRKAITVLFFIGVRCYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGKAAQDVWNRADNHFKDTYGFSILDIVINNPLTIHFGGEKGKRIRENYSEKGLLSATQFTQPALTLMEKAAFEDLKLVEVVFYRGMTMQV------- | |||||||||||||
| 4 | 3t5oA | 0.14 | 0.11 | 3.90 | 4.16 | HHsearch | VPANL------------ENVGFEVQTAKDLTSLGHVPI--FYSSKRSEN-INHNSAFKQAIQASHKKDSSFIRIHKVMKVLNFTTK-----AKDLHLSDVFLKALNHLPLEYNSA-LYSRIFDDFGTHYFTSGSLGGVYDLLYQFSSEELKNSGLTE----EEAKHCVKRVLFAKEHRCTTLSEKHEGSAALAWEEKTFSEWLESVKENPAVIDFELVNIPCAVTKRNNLRKALQEYAAKFD---PCQCAPCPNNGRPTLSGTECLCVCQSGTYGENCEKQSPD---YKSNAVDGQWGCWSSWSTCDATYKRSRTRAPQTPCINDDE--------------------------------------EDSGCPQPVPP | |||||||||||||
| 5 | 3i0pA | 0.09 | 0.09 | 3.33 | 0.59 | CEthreader | ------QTKNVSIDTIKEFMYQVLLKVGSDEENARMVRDTLIAADLRGMDTHGIQRFKTVYIDRIKKGMINPTAKPSIIRETSTTCVLDGNNGFHVNGTIGMKMAIEKAKKYGMGMVVVRNSTHFGIAGYYSLLAAQEGCIGICGTNARSSVAATFGDEPILGTNPLAIGIPSDEAFPYCFDGATSISPTGRFEKYVRMG--------KTVDKSWASMKGGKPIEDPKELLENYPKGKAYLHPLGGSDEVSGSHKGYCLSEFVEIMSSCLSIA-NFLNHIEEEKEKSGKFSLGHFFIAINVECFRDLNEFKKNVGDI-NRTLRNTDKLPGHDRIYTAGEKEYETEQKRRKFGDDLPLVTINEMKELSSFYNVPLPF | |||||||||||||
| 6 | 6bk8U | 0.07 | 0.06 | 2.57 | 0.85 | EigenThreader | ESTDEAELINVLLVKGFTSHILERYQQKRNESLATLALNITIKSVYEKYLLNFNYLASLEKLGDNQYEEFMRQMNGPD--KWLFLILSLAKYYIGRLDSCGDLLKKSLQQFDRIYNFYLLFEQECSQFILGKLKEND---------DNDVALRQDSLVETWMKRVSLQKSAA--EKCNVYSEAILKIDPRKVGTPGSFGRLAISTARELWTQSLKVPYPYIEDLEEIYLNWADRELDVERAFSILEDALHVPTNPEI------------LLESLRIWSKYIDYLEAYIFNKTKMAYNTVIDLRLQLWRMCISKAESTLGPSVTRELYQECIQILPNSKAVEFVIKFSDFESSIGREILAYGAKLL-----PPSRNT | |||||||||||||
| 7 | 6cxoA | 0.15 | 0.10 | 3.49 | 0.88 | FFAS-3D | ----HLEVFKAINREKTSNFNADFALKFSATEVPEFKF-----------SYFMGKNFRRLSSYFSQSKKMFVHLRGVVQLGRFVMRNRD-----VVLRSTFLDDVKALPTSYEKGEYFG-FLETYGTHYSTSGSLGGQYEIVYVLDKASMKEKGVDLNDVKHCLDVISFIRGGTREQAILLKEKILRGDKTFDKTDFANWASSLANAPALISQRMSPIKIKDAYIKKQNLEKAVEDYIDEFSTKRCY---PCLNGGTIILLDGQCLCSCPMMFRGMACEIHQ---------------------------------------------------------------------------------------------- | |||||||||||||
| 8 | 6cxoA | 0.15 | 0.10 | 3.49 | 1.12 | SPARKS-K | TENYDEHLEVFKAINREKTSNFNADF--------------ALKFSATEVPSYFMGKNFRRLSSYFSQKKMFVHLRGVVQLGRFVMR-----NRDVVLRSTFLDDVKALPTSYEK-GEYFGFLETYGTHYSTSGSLGGQYEIVYVLDKASMKEKGVDLNDVKHCLDNIIDDVISFTREQAILLKEKILRGDK-TFDKTDFANWASSLANAPALISQRMSPIKDAYIKKQNLEKAVEDYIDEFS---TKRCYPCLNGGTIILLDGQCLCSCPMMFRGMACEIHQ---------------------------------------------------------------------------------------------- | |||||||||||||
| 9 | 3ojyA | 0.18 | 0.11 | 3.47 | 1.36 | CNFpred | -------------------------------------------------------SFLNELNKYNEKKFIFTRIFTKVQTAHFKMRKD-----DIMLDEGMLQSLMELPDQYN-YGMYAKFINDYGTHYITSGSMGGIYEYILVIDKAKMESLGITSRDITTCFGGSLG-CKKFGGGKTERARKAMAVEDIISRVR-TYRSWGRSLKYNPVVIDFEMQP-GPLEAKRQNLRRALDQYLMEFN---ACRCGPCFNNGVPILEGTSCRCQCRLGSLGAACE-----------AKADGSWSCWSS-------------------------------------------------------------------------- | |||||||||||||
| 10 | 5cskA | 0.05 | 0.04 | 1.88 | 0.83 | DEthreader | SERLQTKSGGYDNQVIMNASLQ------------KNNLILAILKHY-QPLC--SSKVSAQGALPSVERTIYVVFDLLYIRAYRAYIWKFQLPLREGILMALANVCVAST--EE-ILVRLRILDLNKLIIRNGNIPALELRGI-------------------EYLTSEANRLMDI-FIAVFDIPDVEAAFGGFKTEKPGSMHL--RPIATP-YP--------RYAHLGTTYVDITFKIGSFGQRIGMAEE-KENSVLTE------VIKTI------IGSEDGLGVECLRGSVGIGAYLVRGQRAIQYGSHLT-AV--D-----D---LAGVEKIVEWMSYSFFRARGVIGVMILANWRIELRAGVLEQGMVGIFR-- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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| References: | |
| 1. | Wei Zheng, Qiqige Wuyun, Yang Li, Quancheng Liu, Xiaogen Zhou, Yiheng Zhu, P. Lydia Freddolino, Yang Zhang. Integrating deep learning potentials with I-TASSER for single- and multi-domain protein structure prediction. Submitted. 2023. |