GO:0003700	F	0.82	transcription factor activity, sequence-specific DNA binding
GO:1901363	F	0.58	heterocyclic compound binding
GO:0097159	F	0.58	organic cyclic compound binding
GO:0003676	F	0.48	nucleic acid binding
GO:0003677	F	0.47	DNA binding
GO:0043565	F	0.37	sequence-specific DNA binding
GO:0044212	F	0.30	transcription regulatory region DNA binding
GO:0003690	F	0.24	double-stranded DNA binding
GO:0000976	F	0.23	transcription regulatory region sequence-specific DNA binding
GO:0000977	F	0.22	RNA polymerase II regulatory region sequence-specific DNA binding
GO:0097367	F	0.17	carbohydrate derivative binding
GO:0036094	F	0.17	small molecule binding
GO:0032555	F	0.16	purine ribonucleotide binding
GO:0032550	F	0.16	purine ribonucleoside binding
GO:0035639	F	0.15	purine ribonucleoside triphosphate binding
GO:0000981	F	0.15	RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0003824	F	0.14	catalytic activity
GO:0043167	F	0.13	ion binding
GO:0046872	F	0.12	metal ion binding
GO:0032559	F	0.12	adenyl ribonucleotide binding
GO:0000987	F	0.12	core promoter proximal region sequence-specific DNA binding
GO:0005524	F	0.11	ATP binding
GO:0000978	F	0.11	RNA polymerase II core promoter proximal region sequence-specific DNA binding
