| >P29120 (357 residues) KERSKRSALRDSALNLFNDPMWNQQWYLQDTRMTAALPKLDLHVIPVWQKGITGKGVVIT VLDDGLEWNHTDIYANYDPEASYDFNDNDHDPFPRYDPTNENKHGTRCAGEIAMQANNHK CGVGVAYNSKVGGIRMLDGIVTDAIEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLA QKAFEYGVKQGRQGKGSIFVWASGNGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYA EKCSSTLATSYSSGDYTDQRITSADLHNDCTETHTGTSASAPLAAGIFALALEANPNLTW RDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNSRFGFGLLNAKALVDLADPRTWRSV |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | KERSKRSALRDSALNLFNDPMWNQQWYLQDTRMTAALPKLDLHVIPVWQKGITGKGVVITVLDDGLEWNHTDIYANYDPEASYDFNDNDHDPFPRYDPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGIVTDAIEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFVWASGNGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQRITSADLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNSRFGFGLLNAKALVDLADPRTWRSV |
| Prediction | CCCHHHCHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCSSSSSCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCSSSSSCCCCSSSSSSCCCCCCHHHHHHHHHHHHCCCCSSSCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCSSSSCCCCCCSSSSCCHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCHHHHHHHHHHCCCCCC |
| Confidence | 953000100135568999987244458766787788776667859999717899991999975898999931432557667855668999988899999999972235555431047996168750788154787469887459999999875279919967899987887778851899999999998754138819998289899999999999876776505677417999856767899851786268876788861321379981553174306779999999999984989999999999998665678888876433677754478877525279999999841678709 |
| H:Helix; S:Strand; C:Coil | |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | KERSKRSALRDSALNLFNDPMWNQQWYLQDTRMTAALPKLDLHVIPVWQKGITGKGVVITVLDDGLEWNHTDIYANYDPEASYDFNDNDHDPFPRYDPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGIVTDAIEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFVWASGNGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQRITSADLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNSRFGFGLLNAKALVDLADPRTWRSV |
| Prediction | 854444443444334213212044003032243443243220303401741352723130040304234124334302331000001333222343325142100000000000203312000000120200001000131110000000002343010000000032111001112400220023013322422100000000021464331101000112110000121474330210132210000011311223320200214141001100000000000000000102247031510240034005435266444244132333222200000010420052056461666 |
| Values range from 0 (buried residue) to 8 (highly exposed residue) | |
| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SS Seq | CCCHHHCHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCSSSSSCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCSSSSSCCCCSSSSSSCCCCCCHHHHHHHHHHHHCCCCSSSCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCSSSSCCCCCCSSSSCCHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCHHHHHHHHHHCCCCCC KERSKRSALRDSALNLFNDPMWNQQWYLQDTRMTAALPKLDLHVIPVWQKGITGKGVVITVLDDGLEWNHTDIYANYDPEASYDFNDNDHDPFPRYDPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGIVTDAIEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFVWASGNGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQRITSADLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNSRFGFGLLNAKALVDLADPRTWRSV | |||||||||||||||||||
| 1 | 6hlbA | 0.59 | 0.56 | 15.99 | 1.33 | DEthreader | -------V---Y--QEPTDPKFPQQWYLS-GVTQ---R--DLNVKAAWAQGYTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTAVEARSLGL-NPNHIHIYSASWGPEDDKTVD-GPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHL-NANDWATNGVGRKVSHSYGYGLLDAGAMVALAQN-WTTVA | |||||||||||||
| 2 | 1p8jA1 | 0.62 | 0.59 | 16.82 | 2.65 | SPARKS-K | ------------VYQEPTDPKFPQQWYLSG------VTQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHL-NADDWATNGVGRKVSHSYGYGLLDAGAMVALAQN--WTTV | |||||||||||||
| 3 | 1p8jA1 | 0.60 | 0.55 | 15.66 | 1.08 | MapAlign | ---------------EPTDPKFPQQWYLSG------VTQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGTDAVEARSLGLNP--NHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYS-----SGQIVTTDLR-QKCTEHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHL-NADDWATNGVGRKVSHSYGYGLLDAGAMVALAQN--WTTV | |||||||||||||
| 4 | 1p8jA1 | 0.62 | 0.59 | 16.75 | 0.66 | CEthreader | ------------VYQEPTDPKFPQQWYLSGVTQ------RDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLN-ADDWATNGVGRKVSHSYGYGLLDAGAMVALAQ--NWTTV | |||||||||||||
| 5 | 1p8jA1 | 0.62 | 0.59 | 16.82 | 2.06 | MUSTER | ------------VYQEPTDPKFPQQWYLSGVTQR------DLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHL-NADDWATNGVGRKVSHSYGYGLLDAGAMVALA--QNWTTV | |||||||||||||
| 6 | 6hlbA | 0.62 | 0.59 | 16.75 | 2.06 | HHsearch | ------------VYQEPTDPKFPQQWYLSGVTQ------RDLNVKAAWAQGYTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHL-NANDWATNGVGRKVSHSYGYGLLDAGAMVAL--AQNWTTV | |||||||||||||
| 7 | 1p8jA1 | 0.63 | 0.59 | 16.74 | 3.26 | FFAS-3D | --------------QEPTDPKFPQQWYLSGVT------QRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNA-DDWATNGVGRKVSHSYGYGLLDAGAMVALA--QNWTTV | |||||||||||||
| 8 | 1r64A | 0.43 | 0.42 | 12.23 | 1.50 | EigenThreader | ----LLPVKEAEDKLSINDPLF----ERQWHLVNPSFPGSDINVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFCAEGSWDFNDNTNLPKPR---LSDDYHGTRCAGEIAAKKGNNFCGVGVGYNAKISGIRILSGDITTEDEAASLIYGLDVNDIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHKDLHPPYSEGCSAVMAVTYSSG--SGEYIHSSDINGRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSKTWENVNA | |||||||||||||
| 9 | 1p8jA | 0.62 | 0.59 | 16.75 | 3.77 | CNFpred | -------------YQEPTDPKFPQQWYLSGV------TQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNA-DDWATNGVGRKVSHSYGYGLLDAGAMVALAQ--NWTTV | |||||||||||||
| 10 | 1p8jA | 0.59 | 0.56 | 15.99 | 1.33 | DEthreader | -------V---Y--QEPTDPKFPQQWYLSG-VTQ---R--DLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTAVEARSLGL-NPNHIHIYSASWGPEDDKTVD-GPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHL-NADDWATNGVGRKVSHSYGYGLLDAGAMVALAQN-WTTVA | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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| References: | |
| 1. | Wei Zheng, Qiqige Wuyun, Yang Li, Quancheng Liu, Xiaogen Zhou, Yiheng Zhu, P. Lydia Freddolino, Yang Zhang. Integrating deep learning potentials with I-TASSER for single- and multi-domain protein structure prediction. Submitted. 2023. |