| >P50213 (366 residues) MAGPAWISKVSRLLGAFHNPKQVTRGFTGGVQTVTLIPGDGIGPEISAAVMKIFDAAKAP IQWEERNVTAIQGPGGKWMIPSEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFDL YANVRPCVSIEGYKTPYTDVNIVTIRENTEGEYSGIEHVIVDGVVQSIKLITEGASKRIA EFAFEYARNNHRSNVTAVHKANIMRMSDGLFLQKCREVAESCKDIKFNEMYLDTVCLNMV QDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKD MANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEICR RVKDLD |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | MAGPAWISKVSRLLGAFHNPKQVTRGFTGGVQTVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVTAIQGPGGKWMIPSEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFDLYANVRPCVSIEGYKTPYTDVNIVTIRENTEGEYSGIEHVIVDGVVQSIKLITEGASKRIAEFAFEYARNNHRSNVTAVHKANIMRMSDGLFLQKCREVAESCKDIKFNEMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEICRRVKDLD |
| Prediction | CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCHHHHHHHHHHHHHHCCCCSSSSSSCCHHHHHCCCCCCCHHHHHHHHHCCSSSSCCCCCCCCCCCSCHHHHHHHHHCCSSSSSSSSSCCCCCCCCCCCSSSSSSCCCCCSCCCCCCSCCCCSSSSSSSSCHHHHHHHHHHHHHHHHHCCCCCSSSSSCCHHHHHHHHHHHHHHHHHHHHCCCCSSSHHHHHHHHHHHHHCCCCCCSSSSCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCC |
| Confidence | 998521232122213556777778777898369999568987768999999999981999327999615776651498699999999997496998887799999942535899997098188635551389667879962999913998611477646149869997774167899999999999998299908999651022343568999999999769997121241999999997391225589848764368888988751751016435459999757646888740007888658399999999999981978999999999999998199147677998758999999999998559 |
| H:Helix; S:Strand; C:Coil | |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | MAGPAWISKVSRLLGAFHNPKQVTRGFTGGVQTVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVTAIQGPGGKWMIPSEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFDLYANVRPCVSIEGYKTPYTDVNIVTIRENTEGEYSGIEHVIVDGVVQSIKLITEGASKRIAEFAFEYARNNHRSNVTAVHKANIMRMSDGLFLQKCREVAESCKDIKFNEMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEICRRVKDLD |
| Prediction | 743443344133333424336434554354311000021220131006002400510646051331200131046324201540051047020000000011617414201020044040000000012144050306500000000111010022544246310200120036102100210041047372410000000100430230024004300751460424200000000100430540000002001000000000000100100000002572100000010101111334200000000000000210426500520250034006534310210025030440042006205738 |
| Values range from 0 (buried residue) to 8 (highly exposed residue) | |
| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SS Seq | CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCHHHHHHHHHHHHHHCCCCSSSSSSCCHHHHHCCCCCCCHHHHHHHHHCCSSSSCCCCCCCCCCCSCHHHHHHHHHCCSSSSSSSSSCCCCCCCCCCCSSSSSSCCCCCSCCCCCCSCCCCSSSSSSSSCHHHHHHHHHHHHHHHHHCCCCCSSSSSCCHHHHHHHHHHHHHHHHHHHHCCCCSSSHHHHHHHHHHHHHCCCCCCSSSSCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCC MAGPAWISKVSRLLGAFHNPKQVTRGFTGGVQTVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVTAIQGPGGKWMIPSEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFDLYANVRPCVSIEGYKTPYTDVNIVTIRENTEGEYSGIEHVIVDGVVQSIKLITEGASKRIAEFAFEYARNNHRSNVTAVHKANIMRMSDGLFLQKCREVAESCKDIKFNEMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEICRRVKDLD | |||||||||||||||||||
| 1 | 2d1cA | 0.44 | 0.42 | 12.16 | 1.50 | DEthreader | ----------IT-TETG----KKM-VLEDGRKLITVIPGDGIGPECVEATLKVLEAAKAPLAYEVREAGSVFRRGIASGVPQETIESIRKTRVVLKGPLETPVGYGEKSANVTLRKLFETYANVRPVREFPNVPTPYAGIDLVVVRENVEDLYAGIEHMQTPSVAQTLKLISWKGSEKIVRFAFELARAEGRKKVHCATKSNIMKLAEGTLKRAFEQVAQEYPDIEAVHIIVDNAAHQLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIGNE-VAIFEAVHGSAPKYAGKNVINPTAVLLSAVMMLRYLEEFATADLIENALLYTLEEGRVLTGDVVGGAKTTEYTEAIIQNLGKT- | |||||||||||||
| 2 | 5greA | 0.99 | 0.88 | 24.57 | 3.15 | SPARKS-K | ------------------------------VQTVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNV-----TAIQWMIPSEAKESMDKNKMGLKGPLKTP-----PSMNLLLRKTFDLYANVRPCVSIEGYKTPYTDVNIVTIRENTEGEYSGIEHVIVDGVVQSIKLITEGASKRIAEFAFEYARNNHRSNVTAVHKANIMRMSDGLFLQKCREVAESCKDIKFNEMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEICRRVKDL- | |||||||||||||
| 3 | 6m3sA | 0.46 | 0.42 | 12.11 | 1.08 | MapAlign | -------------------------------QTITVIRGDGIGPEIMDATLFVLDALQAGLTYEYADAGLVALEKHGDLLPESTLASITKNKVALKSPLTTPVGEGFSSINVAMRRKFDLYANVRPAKSFPNTKSRFDGVDLITVRENTEGAYLSGQEVSDGEVAVSGARVTRKGSERIVRYAFDLARATGRKKVTAVHKANIIKSTSGLFLKVARDVATQYPEIEFQEMIVDNTCMQLVMRPEQFDIIVTTNLFGDIISDLCAGLVGGLGLAPGANIGVD-AAIFEAVHGSAPDIAGQGKANPCALLLGAAQMLDHIGQPQNAERLREAIVATLEAKDSLTPDLGGTGNTMGFAKAIASRL---- | |||||||||||||
| 4 | 6m3sA | 0.46 | 0.41 | 12.04 | 0.62 | CEthreader | -------------------------------QTITVIRGDGIGPEIMDATLFVLDALQAGLTYEYADAGLVALEKHGDLLPESTLASITKNKVALKSPLTTPVGEGFSSINVAMRRKFDLYANVRPAKSFPNTKSFADGVDLITVRENTEGAYLSEGQEVSADVAVSGARVTRKGSERIVRYAFDLARATGRKKVTAVHKANIIKSTSGLFLKVARDVATQYPEIEFQEMIVDNTCMQLVMRPEQFDIIVTTNLFGDIISDLCAGLVGGLGLAPGANIGVD-AAIFEAVHGSAPDIAGQGKANPCALLLGAAQMLDHIGQPQNAERLREAIVATLEAKDSLTPDLGGTGNTMGFAKAIASRL---- | |||||||||||||
| 5 | 5greA | 0.99 | 0.88 | 24.64 | 2.58 | MUSTER | ------------------------------VQTVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVT-----AIQWMIPSEAKESMDKNKMGLKGPLKTP-----PSMNLLLRKTFDLYANVRPCVSIEGYKTPYTDVNIVTIRENTEGEYSGIEHVIVDGVVQSIKLITEGASKRIAEFAFEYARNNHRSNVTAVHKANIMRMSDGLFLQKCREVAESCKDIKFNEMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEICRRVKDL- | |||||||||||||
| 6 | 2d1cA | 0.43 | 0.41 | 12.02 | 1.79 | HHsearch | ---PLITTE----------TGKKMHVLEDGRKLITVIPGDGIGPECVEATLKVLEAAKAPLAYEVREAGASVFRRGASGVPQETIESIRKTRVVLKGPLETPVGYGEKSANVTLRKLFETYANVRPVREFPNVPTPYRGIDLVVVRENVEDLYAGIEHMQTPSVAQTLKLISWKGSEKIVRFAFELARAEGRKKVHCATKSNIMKLAEGTLKRAFEQVAQEYPDIEAVHIIVDNAAHQLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIGNE-VAIFEAVHGSAPKYAGKNVINPTAVLLSAVMMLRYLEEFATADLIENALLYTLEEG-RVLTGDVVGAKTTEYTEAIIQNLGKTP | |||||||||||||
| 7 | 5greB | 0.44 | 0.39 | 11.53 | 3.67 | FFAS-3D | ------------------------------RHTVTMIPGDGIGPELMLHVKSVFRHACVPVDFEEVHVS----SNADEEDIRNAIMAIRRNRVALKGNIETNLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVRENTEGEYSSLEHESVAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLVGGPGLVAGANYGHVYAVFETATRNTGKSIANKNIANPTATLLASCMMLDHLKLHSYATSIRKAVLASMDNENMHTPDIGGQGTTSEAIQDVIRHIRVI- | |||||||||||||
| 8 | 2d1cA | 0.40 | 0.37 | 11.04 | 1.35 | EigenThreader | ----------------------PETGKEDGRKLITVIPGDGIGPECVEATLKVLEAA-KAPLAYEVREAGVFRRGIASGVPQETIESIRKTRVVLKGPLETPVGYGEKSANVTLRKLFETYANVRPVREFPNVPTPYRGIDLVVVRENVEDLYAGIEHMQTPSVAQTLKLISWKGSEKIVRFAFELARAEGRKKVHCATKSNIMKLAEGTLKRAFEQVAQEYPDIEAVHIIVDNAAHQLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIGNEVAIFEAVHGSAPK-YAGKNVINPTAVLLSAVMMLRYLEEFATADLIENALLYTLEEGRVLTVGYDRGAKTTEYTEAIIQNLGKTP | |||||||||||||
| 9 | 5greA | 1.00 | 0.89 | 24.86 | 3.41 | CNFpred | ------------------------------VQTVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVTAIQ-----WMIPSEAKESMDKNKMGLKGPLKTP-----PSMNLLLRKTFDLYANVRPCVSIEGYKTPYTDVNIVTIRENTEGEYSGIEHVIVDGVVQSIKLITEGASKRIAEFAFEYARNNHRSNVTAVHKANIMRMSDGLFLQKCREVAESCKDIKFNEMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGLFDHAARIEAACFATIKDGKSLTKDLGGNAKCSDFTEEICRRVKDL- | |||||||||||||
| 10 | 1hqsA | 0.35 | 0.33 | 9.70 | 1.50 | DEthreader | ----------SN-GV-------L--NVP-NNPIIPFIEGDGTGPDIWNAASKVLEAAEKKITWKEVYAGEKAY--TGEWLPAETLDVIREYFIAIKGPLTTPVGGGIRSLNVALRQELDLFV-LRPVRYFTGVPSRPEDTDMVIFRENTEDIYAGIEYVISIRPSIGIKPVSEEGTSRLVRAAIDYAIEHGRKSVTLVHKGNIMKFTEGAFKNWGYELAEEYKKIIIKDSIADIFLQQILTRPNEFDVVATMNLNGDYISDALAAQVGGIGIAPGANINETGHAIFEATHGTAPKYAGLDKVNPSSVILSGVLLLEHLGWNEAADLVIKSMEKTIASK-VVTYDFAREVKCSEFGEELIKNM--D- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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| References: | |
| 1. | Wei Zheng, Qiqige Wuyun, Yang Li, Quancheng Liu, Xiaogen Zhou, Yiheng Zhu, P. Lydia Freddolino, Yang Zhang. Integrating deep learning potentials with I-TASSER for single- and multi-domain protein structure prediction. Submitted. 2023. |