| >P57740 (347 residues) MDRSGFGEISSPVIREAEVTRTARKQSAQKRVLLQASQDENFGNTTPRNQVIPRTPSSFR QPFTPTSRSLLRQPDISCILGTGGKSPRLTQSSGFFGNLSMVTNLDDSNWAAAFSSQRSG LFTNTEPHSITEDVTISAVMLREDDPGEAASMSMFSDFLQSFLKHSSSTVFDLVEEYENI CGSQVNILSKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRHYHIVQKFLILGD IDGLMDEFSKWLSKSRNNLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLIRE KHTNLIAFYTCHLPQDLAVAQYALFLESVTEFEQRHHCLELAKEADL |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | MDRSGFGEISSPVIREAEVTRTARKQSAQKRVLLQASQDENFGNTTPRNQVIPRTPSSFRQPFTPTSRSLLRQPDISCILGTGGKSPRLTQSSGFFGNLSMVTNLDDSNWAAAFSSQRSGLFTNTEPHSITEDVTISAVMLREDDPGEAASMSMFSDFLQSFLKHSSSTVFDLVEEYENICGSQVNILSKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRHYHIVQKFLILGDIDGLMDEFSKWLSKSRNNLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLIREKHTNLIAFYTCHLPQDLAVAQYALFLESVTEFEQRHHCLELAKEADL |
| Prediction | CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC |
| Confidence | 98542132566543655664677764201001013665543246788776667882112677888871112589830100578988666788234321222258886789997355421111236776423679999999727881688898879999999995251489999999999999999999875324787654202248999999984034889999852099999999965679999999999851556798048999999999999949987536899999999999998099351666782299679999999999717999999999999999189 |
| H:Helix; S:Strand; C:Coil | |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | MDRSGFGEISSPVIREAEVTRTARKQSAQKRVLLQASQDENFGNTTPRNQVIPRTPSSFRQPFTPTSRSLLRQPDISCILGTGGKSPRLTQSSGFFGNLSMVTNLDDSNWAAAFSSQRSGLFTNTEPHSITEDVTISAVMLREDDPGEAASMSMFSDFLQSFLKHSSSTVFDLVEEYENICGSQVNILSKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRHYHIVQKFLILGDIDGLMDEFSKWLSKSRNNLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLIREKHTNLIAFYTCHLPQDLAVAQYALFLESVTEFEQRHHCLELAKEADL |
| Prediction | 75453134022222434512440454424341413344453233422444315432542446214554533442412211134542442353443333133344144521343233433422442434423431110011134643135313320240021014333420140054037204521420441254244354435325301410444344551343045212101110014314500530251056555534120000000100001103363456203300310041036363230000000203562013100300340546720440051057278 |
| Values range from 0 (buried residue) to 8 (highly exposed residue) | |
| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SS Seq | CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC MDRSGFGEISSPVIREAEVTRTARKQSAQKRVLLQASQDENFGNTTPRNQVIPRTPSSFRQPFTPTSRSLLRQPDISCILGTGGKSPRLTQSSGFFGNLSMVTNLDDSNWAAAFSSQRSGLFTNTEPHSITEDVTISAVMLREDDPGEAASMSMFSDFLQSFLKHSSSTVFDLVEEYENICGSQVNILSKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRHYHIVQKFLILGDIDGLMDEFSKWLSKSRNNLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLIREKHTNLIAFYTCHLPQDLAVAQYALFLESVTEFEQRHHCLELAKEADL | |||||||||||||||||||
| 1 | 3ikoF | 0.13 | 0.12 | 3.99 | 1.21 | SPARKS-K | ADLDLDEMELHPYNSRGLFEKKLMQDNKQYQIWIVMVWLKENTYVMER---PKNVPTSKWLNSITSGGLKSCDLDF---PLRENTNVLDVKDKEEDHIFFKYKLSDNISICMILCGIQEYLNPVINTQQGIKKHTVYSLSQQAGDPYERAIYSYLSGAIPNEVLQYSDWESDLHIHLNQILQTEIENYLLENNQVGPLPSHALTVQEVLNRVASRPSESEH------PIRVLMASVILDSLPSVIHSSVEML---LIIDKPYLLRIVTHLAICLDIINPGSEEVDKSKLITTYISLLKLQGLYENIPIYATFLNESDCL---------------------------- | |||||||||||||
| 2 | 6x02A | 0.15 | 0.13 | 4.46 | 5.30 | HHsearch | LANSGDDLDDNKQLYQIWIVMVWLKENTY----------------VMERPKN--VPTSK-WLNSN----VLDVKDKHIFFKYIYE---LI----LAGAIDEALLSD-NISIMILCGIQ--EYLVIDTKHSLWRRTVYSLSQAGLDPYERAIYSYLSGAIPNQVLQYSDWESDLHIHLNQILQTEIENYLLENNQVGDEPSHALTVQEVLNRVAS-----RHPSESEHPIRVLMASVILDSLPSVIHSSVEMLLD----DKPYLLRIVTHLAICLDIINPGVEEVDKSKLITTYISLLKLQGLYENIPIYATFLNESDCLEACSFILSSLEDPQVRKKQIETINFLRL | |||||||||||||
| 3 | 5a9q4 | 0.36 | 0.34 | 10.03 | 1.54 | FFAS-3D | ----------DSLVRQSQLVVDWLESIAKDEIGIEYAKSVYWENTLHTPLVTELDPDAIRQKMPLDDLDREDEVRLLKYL------FTLIRAGMTEEAQRLCKRCGQAWRAATLEGWKLYHDPNVNGGTELEPVEWRMAEDELFNRYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIQTETEELPRLGANWTLEKVFEELQATDL-----EENQEHYHIVQKFLILGDIDGLMDEFSKWLSRN--NLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLIREKHTNLIAFYTCHLPQDLAVEDRLKIDVIDFDPAQRAEALKQGNA--- | |||||||||||||
| 4 | 1z5hA | 0.07 | 0.05 | 2.17 | 0.83 | DEthreader | -------------------------KYDLTTETIINWMKDTAFAPGDSQQKIEIARMFPITVVIDSERKVVKFRYILASL-------------------IPYALPKMHLI------------------A--AMEN-WGAITFM---AVIAHEIAHATFMS-KT-MDTLFPEWSFW-DFASILRMIEYAWPVKRVME-YWIKNPGYPVRFGWPVPVNERIKINADSLDRIGLVDDLFAFSIPETYRQRIRNFF---D-DEDHNVITAIVGQMEYLRMLT-HAFDDDARAFCRSRMQFLTGKKILGRVSRLYVMVDESYAE-EMS-KL--KDFDSAEMRSIATAYALVT | |||||||||||||
| 5 | 5a9q4 | 0.33 | 0.32 | 9.53 | 1.19 | SPARKS-K | EESVVTAVNASEKTVVEALFQRVRQSQLVVDWLESIAKDEIGIEYAKSVYWENTLHTPLVTELDPDAPIRQKMPLDDLDREDEVRLLKYLFTLIRAGMTEEAQRLGQAWRAATLEGWKLYHDELEPVEGNPYRRIWKISCWRLFNRYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIQTSVATLPRLGANWTLEKVFEELQATDL-----EENQEHYHIVQKFLILGDIDGLMDEFSKWLSRNNL--PGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLIREKHTNLIAFYTCHLPQDLKIDVIDWLVFD---PAQRAEALKQGNAIMR | |||||||||||||
| 6 | 5oqrA | 0.09 | 0.09 | 3.32 | 0.92 | MapAlign | KKRVRILKWGLNDRDESVEKAAADMLAYQWIELLERLDVSNNSDVAVLAIKKFFDVRVDSLSQLEFPEQFWLELTAESSLLARTFNEICIEKNYTDLLDKMPEVVQLTYYIERQYVSLESCFIIEQLLYIGLSQDMVDEIGRRKLLKSLTNSLSTSLHIELLRKLCSENDFCSLLVEIITEVRCLSYVQCLFENITSSLNENLYMVDMLKTIIPAVRSHDLPIREKGLECLSLVCLLNALAFENVPLYLHCYEK----GSVVLKCTAIRTLTDMLIQHGKFYEDAISSILFEALGEFENAELQTLGAEAIALYRDELFLKPLIIQYFETVNHALRQVLGYFFPVY-- | |||||||||||||
| 7 | 5a9q4 | 0.33 | 0.33 | 9.86 | 0.75 | CEthreader | VNASEKTVVEALFQRDSLVRQSQLVVDWLESIAKDEIGIEYAKSVYWENTLHTPLVTELDPDAPIRQKMPLDDLDREDEVRLLKYLFTLIRAGMTEEAQRLCKRCGQAWRAATLEGWKLYHDPNVNGGTELEPVEGRMAEDELFNRYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIQTSVATLDETEELPRLGANWTLEKVFELQATDLEENQEHYHIVQKFLILGDIDGLMDEFSKWLSRN--NLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLIREKHTNLIAFYTCHLPQDLAVEDRLKIDVIVFDPAQRAEALKQGNAIMR | |||||||||||||
| 8 | 3ikoF | 0.13 | 0.12 | 3.97 | 0.71 | MUSTER | ADLDLDEMELHPYNSRGLFEKKLMQDNKQYQIWI----------ENTYVMERPKNVPTSKWLNS-ITSGGLKSCDLDFPL--ENTNVLDVKDKEEDHIFFKY-AIDECGIQEYLNPVIDTQIANEFNTQQGIKTVYSLSQQAGLDPYERAIYSYLSGAIPQEVLQYSDWESDLHIHLNQILQTEIENYLLENNQVGPLPSHALTVQEVLNRVASRH-----PSESEHPIRVLMASVILDSLPSVIHSSVEML---LIIDKPYLLRIVTHLAICLDIINPSVEEVDKSKLITTYISLLKLQGLYENIPIYATFLNESDCL---------------------------- | |||||||||||||
| 9 | 3ikoF | 0.14 | 0.12 | 4.21 | 4.35 | HHsearch | ADLDLDEMELHPYNSRGLFEKKLMQDNKQLYWIVMVWLKENTY--VMERPKNVPTSKWLITS--G----GLKSCDLDFPLRENTNLVKFFKYYELAGAIDEALEEADNISICMLYLNPNTQQGI--KKHSLWRRTVYSLSQAGLDPYERAIYSYLSGAIPNQVLQYSDWESDLHIHLNQILQTEIENYLLENNQVGPLPSHALTVQEVLNRVAS-----RHPSESEHPIRVLMASVILDSLPSVIHSSVEMLL---IIDKPYLLRIVTHLAICLDIINPGVEEVDKSKLITTYISLLKLQGLYENIPIYATFLNESDCL---------------------------- | |||||||||||||
| 10 | 3ikoF | 0.15 | 0.12 | 3.87 | 1.45 | FFAS-3D | CDRENTNVLDV---KDKEEDHIFFKY---IYELILA------GAIDEALEEAKLSDNISICM-ILCGIQEYLNPVIDTQIANEFNTQQGIKKHSL---------WRRTVYSLSQQA--------------------------GLDPYERAIYSYLSGAIPNQEVLYSDWESDLHIHLNQILQTEIENYLLEDELILPLPSHALTVQEVLNRVA-----SRHPSESEHPIRVLMASVILDSLPSVIHSSVEML---LIIDKPYLLRIVTHLAICLDIINPGSEEVDKSKLITTYISLLKLQGLYENIPIYATFLNESDCL---------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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| References: | |
| 1. | Wei Zheng, Qiqige Wuyun, Yang Li, Quancheng Liu, Xiaogen Zhou, Yiheng Zhu, P. Lydia Freddolino, Yang Zhang. Integrating deep learning potentials with I-TASSER for single- and multi-domain protein structure prediction. Submitted. 2023. |