| >Q12948 (342 residues) NAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGS SPPGSLPSARPLSLDGADSAPPPPAPSAPPPHHSQGFSVDNIMTSLRGSPQSAAAELSSG LLASAAASSRAGIAPPLALGAYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGAG TYHCNLQAMSLYAAGERGGHLQGAPGGAGGSAVDDPLPDYSLPPVTSSSSSSLSHGGGGG GGGGGQEAGHHPAAHQGRLTSWYLNQAGGDLGHLASAAAAAAAAGYPGQQQNFHSVREMF ESQRIGLNNSPVNGNSSCQMAFPSSQSLYRTSGAFVYDCSKF |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | NAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPPPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLALGAYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGGAGGSAVDDPLPDYSLPPVTSSSSSSLSHGGGGGGGGGGQEAGHHPAAHQGRLTSWYLNQAGGDLGHLASAAAAAAAAGYPGQQQNFHSVREMFESQRIGLNNSPVNGNSSCQMAFPSSQSLYRTSGAFVYDCSKF |
| Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
| Confidence | 999889999652333368888899999999887878777777887789988887767888999988888888888888899999999999888987566776677788998887777888888888888888888877788899998777888777888777788887888888888888666687777776788887777889888888877788888888998888888888888888888988888888888888887666788888777888877777888888777774401014555556677877888865103689987545788620145679 |
| H:Helix; S:Strand; C:Coil | |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | NAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPPPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLALGAYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGGAGGSAVDDPLPDYSLPPVTSSSSSSLSHGGGGGGGGGGQEAGHHPAAHQGRLTSWYLNQAGGDLGHLASAAAAAAAAGYPGQQQNFHSVREMFESQRIGLNNSPVNGNSSCQMAFPSSQSLYRTSGAFVYDCSKF |
| Prediction | 856456444341451436615264245444463425446444325444274554444444435444444443436445444444354434455141131633143353324444443445344444344444343344344344444432343233444444444444344434344333323243433333344543442424443454444453345344444444444434444444454444444444444544144222443434344144444444444344544414203421534433354441444441313144443122341112131456 |
| Values range from 0 (buried residue) to 8 (highly exposed residue) | |
| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPPPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLALGAYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGGAGGSAVDDPLPDYSLPPVTSSSSSSLSHGGGGGGGGGGQEAGHHPAAHQGRLTSWYLNQAGGDLGHLASAAAAAAAAGYPGQQQNFHSVREMFESQRIGLNNSPVNGNSSCQMAFPSSQSLYRTSGAFVYDCSKF | |||||||||||||||||||
| 1 | 5jcss | 0.10 | 0.10 | 3.60 | 1.15 | SPARKS-K | SRGETVKAANGFQLISTVRINEDHQKDSSNKIYNLNMIGMRIWNVIELEEPSEEDLTHILAQKFPILTNLIPKLIDKSIYMNTKFISLNKGAHTRVVSVRDLIKILFKNNGINKPDQLIQSSVYDSIFSEAADCFAGAIGEFKALEPESLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRSVCIQMTEPVQQLAKMLAKKLTVINVSQQTETGDLLGGYKPKTVAVPIQENFETLFNATFSLKKNEKFHKMLHRCFNK-NQWKNVVKLWNEAYKMAQSILKITNTENENERRLNTHEKKLLLDKWADFNDSVKKF | |||||||||||||
| 2 | 1vt4I3 | 0.19 | 0.05 | 1.60 | 1.13 | HHsearch | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EYAL-HRSDHYNIPKTF----DSDDLIPPYLDQY--------------------------------------FYSHIGHHLKN-------------IEHPERMTLFRMVFLDFRHDSTAWNASGSILNTLQQLK---FYK-----PYICDND | |||||||||||||
| 3 | 1vt4I3 | 0.16 | 0.16 | 5.25 | 0.66 | CEthreader | RGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
| 4 | 7kdtA | 0.07 | 0.07 | 2.87 | 0.62 | EigenThreader | PKYVKALFRRAK--AHEKLDNKKECLEDVTAVCILEGFQNKVLKLLGKEKAKEKYKNREPLMPSPQFIKSYFSSFTDDIISQPYLKAKQYMEEENYDKIISECSKEIDAEGKYMAEALLLRATFYLLIGNANAAKPDLDKVISLKEANVKLRANALIKRGSMYMQQQQPLLSTQDFNMAADID--------PQNADVYHHRGQLKILLDQVEEAVADFDECIRLRPESALAQAQKCFALYRQAYTGNNSSQIQAAMKGFEEVIKKFPRCAEGYALYAQALTDQQQFGKADEMYDKCIDLETYVHKGLLQLQWKQDLDRGLELISKAIEIDNKCDFAYETMGT | |||||||||||||
| 5 | 3c5bA | 0.09 | 0.08 | 3.21 | 0.60 | FFAS-3D | -MALIGQTLPSLLDIYNRTDKNGRIARIVE-QLAKTNDILTDAIYVPC--NDGSKHKTTIRAGIPEPVWRRYNQGVQPTKTQTVPVTDTTGMLYDLGFVDKALADRSNNAAAFRVS-----ENMGKLQGFNNKVARYSIYGNTDAEPEAFM-----GLAPRFNTLSTSKAASAENVFSAGGSGSTNTSIWFMSWGENTAHMIYPEGMVAGFQHEDLGDDLVSDGNGAYRDEFKWDIGLSVRDWRSISRICNIDVTTLTKD----ASTGADLISMMVDAYYARDVAMLGDGKEVKTIHAWLHK----QAMNAKNVNLTIEEYGGKKIVSFLGIPIRRVD---- | |||||||||||||
| 6 | 6em5m | 0.07 | 0.07 | 2.75 | 1.14 | SPARKS-K | NPYEPLIDWFTRHEEVMPLTAVPEPKRRFVPSKNERIIPPKKLKEMKEKEKIENYQYDLWGDSTETNDHVMHLRAPKLPPPTNEESYNPPEEYLLS--------------PEEKEAWENTEYSERERNFIPQKYSALRKVPYGESIRDLYLAPRVRKNKLNIDPNSLIPELPSPKDLRPFP---IRCSTIYAGHKGKVRTLSIDPSGLWLATGSDDGTVRVWEILTGREVYRTTLIDDEENPDYHNPDANNGILAVAVGENIHLIVPPIFGYDIENNGKTKIEDGFAQWNKPSQ------KQLEKDICITISCKKTVKKLSWHRKGDYFVTVQPLIHQVSKH | |||||||||||||
| 7 | 5dotA | 0.04 | 0.03 | 1.48 | 0.67 | DEthreader | ----------VAGE-ITDPAY---MNIGGGAPDTTALKYLEGIKVSKV-------------------AEVPGNKMANRQPVAFID------VLILGSGGLS---------------------------GE--FDYSGSQAVKMKKTKQADTVYVEQPDGLI-----------LKEYGVKV----------------------EYEVVTRRSIVCNNRLSA-ASKATGYLDYAIGREERAKELRLIHPWVKQNYLYVV-GCGPYHIGSSVEFDWCAVSSIRTLRQLGEVSFPFKIKAEVACFAMTGFKIPGILIFLALVALVIIRVLLTNQVKLFAEVQ---- | |||||||||||||
| 8 | 4qi7A | 0.09 | 0.09 | 3.29 | 0.87 | MapAlign | -----GISTSNKGAQLGWVQAFPSPGNPTCPTQITLSQHDNGMGQWGAAFDSNIAKRVIREGGHITGVEVEAFRNGGYSGIIPVTNTTGRVVLSAGTFGSAKILLRSGIGPKDQLEVVKDMNLYLNGRSGIFAQAAPNIGPLFWEEITGADGIVRQLHWTARVEGSFETPDGYAMTMSQYLGRGATSRGRMTLSPTLNTVAYPSANQTAADFVDKQPVTYQSRRSNHWMGTNKMGTDDGRSGGTAVVDTNTRVYDASIFPGVPTTNPTAYIVVAAEHAAAKILAQPANEAVPKWGWCGTGSQTCQAPYKCEKQNDWYWQCV--------------------- | |||||||||||||
| 9 | 2nbiA1 | 0.13 | 0.13 | 4.39 | 0.91 | MUSTER | SDLNPSSQPSECADVLEEYSDASRPPSCLSFGRVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPTAVGRPDCDVLPFPNNLGCPACCPFECSPDNPPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAIEQCPIDECFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQNINCPACCAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDCTAVGRPDCNVLPFPNNIGCPSCCPFECSPDNPMFTPSPSPPNCSPT | |||||||||||||
| 10 | 1mj4A | 0.20 | 0.04 | 1.40 | 0.64 | HHsearch | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ST---HIYTK-EVSSHTSP---------ETG-----------IW----VTLG-----------------SEVFDVTEFVDLHPGGPLMLAAGG----PLEPFWAAVHNQSHVRELLAQYKIGEL---------------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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| References: | |
| 1. | Wei Zheng, Qiqige Wuyun, Yang Li, Quancheng Liu, Xiaogen Zhou, Yiheng Zhu, P. Lydia Freddolino, Yang Zhang. Integrating deep learning potentials with I-TASSER for single- and multi-domain protein structure prediction. Submitted. 2023. |