| >Q17RB8 (369 residues) SVVLNHLAEKWFPGQRERARAAGRLGELLHQGRYREALAAACEALRAEPSDLIVKIYRAE SYAGLQEFKAAIEDLNAVLFQLPDWPEVYFRKGKVLCDAGFLGDALQLFLQCLALDEDFA PAKLQVQKILCDLLLPENLKEGLKESSWSSLPCTKNRPFDFHSVMEESQSLNEPSPKQSE EIPEVTSEPVKGSLNRAQSAQSINSTEMPAREDCLKRVSSEPVLSVQEKGVLLKRKLSLL EQDVIVNEDGRNKLKKQGETPNEVCMFSLAYGDIPEELIDVSDFECSLCMRLFFEPVTTP CGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQLLEELIVKYLPDELSERKKI YDEETAELS |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | SVVLNHLAEKWFPGQRERARAAGRLGELLHQGRYREALAAACEALRAEPSDLIVKIYRAESYAGLQEFKAAIEDLNAVLFQLPDWPEVYFRKGKVLCDAGFLGDALQLFLQCLALDEDFAPAKLQVQKILCDLLLPENLKEGLKESSWSSLPCTKNRPFDFHSVMEESQSLNEPSPKQSEEIPEVTSEPVKGSLNRAQSAQSINSTEMPAREDCLKRVSSEPVLSVQEKGVLLKRKLSLLEQDVIVNEDGRNKLKKQGETPNEVCMFSLAYGDIPEELIDVSDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQLLEELIVKYLPDELSERKKIYDEETAELS |
| Prediction | CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCSSCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC |
| Confidence | 913777999865677999999999999999099999999999999969997699999999999928999999999999984999899999999999983279999999999998647779999999999986201345788887755420104443111345577777532320202444324430121344455444566654212257777665432123444211478999876544555431001111110000001111001112332201234554323589999970773158987243999999998289999886514322233345344999999999861999999999999999749 |
| H:Helix; S:Strand; C:Coil | |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | SVVLNHLAEKWFPGQRERARAAGRLGELLHQGRYREALAAACEALRAEPSDLIVKIYRAESYAGLQEFKAAIEDLNAVLFQLPDWPEVYFRKGKVLCDAGFLGDALQLFLQCLALDEDFAPAKLQVQKILCDLLLPENLKEGLKESSWSSLPCTKNRPFDFHSVMEESQSLNEPSPKQSEEIPEVTSEPVKGSLNRAQSAQSINSTEMPAREDCLKRVSSEPVLSVQEKGVLLKRKLSLLEQDVIVNEDGRNKLKKQGETPNEVCMFSLAYGDIPEELIDVSDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQLLEELIVKYLPDELSERKKIYDEETAELS |
| Prediction | 712032003412556640450163025105654154006202400611272020000000001206515400500430061316203001000200220341430040032002024422302411220022222344224214422223142222342222101432343444333224423422243222222322232324334342442232222322223223434224422422242222242322223333432222222222244322222224422410013103300101000200140033007445300202450563443462211300230065103610551364355236638 |
| Values range from 0 (buried residue) to 8 (highly exposed residue) | |
| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SS Seq | CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCSSCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC SVVLNHLAEKWFPGQRERARAAGRLGELLHQGRYREALAAACEALRAEPSDLIVKIYRAESYAGLQEFKAAIEDLNAVLFQLPDWPEVYFRKGKVLCDAGFLGDALQLFLQCLALDEDFAPAKLQVQKILCDLLLPENLKEGLKESSWSSLPCTKNRPFDFHSVMEESQSLNEPSPKQSEEIPEVTSEPVKGSLNRAQSAQSINSTEMPAREDCLKRVSSEPVLSVQEKGVLLKRKLSLLEQDVIVNEDGRNKLKKQGETPNEVCMFSLAYGDIPEELIDVSDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQLLEELIVKYLPDELSERKKIYDEETAELS | |||||||||||||||||||
| 1 | 6sytA | 0.06 | 0.05 | 2.09 | 0.83 | DEthreader | IPVLETAYKLILDLLPVFALLSKNLMIVH----SDLAVHFPAIQYAVLYTLYSHCILLGILLKKDNLNQDTRKLLMTWALEAAVLMFKFCKGLLANTLVEVCLQACSSLHALSS-S-LPDDLLQRCVDCLKIPLVVL-N------Q-SLALR--M--FDVISFILYGNSH--PLGRQDTFQTIEGIIRSLAHTLLLL-L------QTCQDWLTRIRSIMVGAGQ-AV--------LH-------------------------------------QAEGRFAYNKACECYIDAVQEWQAIKSLNLKADFNYIK-LP-MLS----PDPRELQKSIEVLLL-VRPWMQAAKFARKGNVSATLADLVQHFK-- | |||||||||||||
| 2 | 2c2lA | 0.14 | 0.11 | 3.60 | 1.74 | SPARKS-K | --------------SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQDDIPSALRIAKKKRWNSIEERRIHQE-------SELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRA-----QQACIEAKHDKYMADMDELFSQVDEKRK------------------------------------------------KRDIPDY------LCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHNPVTRSPLTQ----EQLIPNLAMKEVIDAFISENGWVEDY---------- | |||||||||||||
| 3 | 3pe3A | 0.09 | 0.09 | 3.38 | 0.55 | MapAlign | ------------SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAAPIQAMWLGYPGTSGALFMDYIITDQETSPAEVAEQYSEKLAYMPHTFFIGDHANMFPHLKKKAVIDFKIYDNRIVLNGIDLKAFLDSLPDVKIVKMKCALNMPVEAVIEMINGQIQITIFSISNLATTQIIAKNRQEYEDIAVKLGTDLEYLKKVRGKVWKQRIS- | |||||||||||||
| 4 | 1w3bA | 0.11 | 0.11 | 3.85 | 0.33 | CEthreader | EAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQ | |||||||||||||
| 5 | 2c2lA | 0.16 | 0.12 | 3.89 | 1.26 | MUSTER | --------------SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDIPSALRIAKK---------------KRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIEAKHDKY-----------------------MADMDELFSQVDEKRKK------------------RDIP------DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHNPVTRSPLT----QEQLIPNLAMKEVIDAFISEDY--------------- | |||||||||||||
| 6 | 2c2lA | 0.13 | 0.10 | 3.38 | 1.43 | HHsearch | --------------SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRDIPSALRIAKKKRWNSIEER-RIHQ-ESELHSY------LTRLIAAEREREL---EEC----Q-------R-----NHEGH-EDDG--HIRAQ-Q---------------ACIEAKHDKYMADMDELF---SQ---VDE--------K------RKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVHFNPVTRSPLT----QEQLIPNLAMKEVIDAFISENGW----VEDY------ | |||||||||||||
| 7 | 2c2lA | 0.14 | 0.10 | 3.43 | 1.65 | FFAS-3D | -----------------AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQDDIPSALRIAKKKRWNSIEER------------------------------------------RIHQESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIEAKHDKYMADMDELFSQVDEKRKKRD------------------------IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHNPVTRSPLTQ----EQLIPNLAMKEVIDAFISEN---------------- | |||||||||||||
| 8 | 6c95A | 0.08 | 0.08 | 3.02 | 0.88 | EigenThreader | ------------SLPPKENALFKRILRCYEHKQYRNGLKFCKQILSNFAEHGETLAMKGLTLNCLGKKEEAYELVRRGLRNDLKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMYETSLKSCRLFNPNDDGKEETPTLIELFLVKAKIYKHAGNIKEAARWMDEAQALDTADRFINSKCAKYMLKANLIKEAEEMCSKFTREGTSAVENLNEMQCMWFQTECAQAYKAMNKFGEALKKCHEIERHFIEITDDQFDFHTYCMRKITNKIETHLFAFEIYFRKEKFLLMLQSVKRAFAIDSSHPWLHECMIRLFNTAVCETNPKNFNETFLKRNLPHRLSAAKMVYYLDPSS | |||||||||||||
| 9 | 2c2lA | 0.14 | 0.10 | 3.35 | 1.21 | CNFpred | --------------SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKE-DDIPSALRIAKKKRWNSI--------EERRIHQESELHSYLTRLIAAERERELE---ECQRNHEGHE------------------------DDGHIRAQQACIEAKHDKYMADMDELFSQVDEKRK-------------------------KRDIPD------YLCGKISFELMREPCITPSGITYDRKDIEEHLQRGHFNPVTRSPLTQE----QLIPNLAMKEVIDAFI------------------- | |||||||||||||
| 10 | 6h02A | 0.05 | 0.04 | 1.64 | 0.67 | DEthreader | MDTPEDEKTKLSFYDCLAMAVELPPRLVC----ESLINSDTLLWALTFKLVRKIIGGVRDLLKVILEKILTILAAREVIAYLERNCLPAYFAVTEIRKLYPEGKVSDFVDTFRP--------T-ARINSICGRCSLLPWLLDMVNMLGLNKQRCPVLEDQLV-DL----------------VVYAMERTSLLWQHLSSLLWVLLQISGSINTVH-E------------------------F--GS-SIQGT--------------------------------VT--Y-------HIGKRPQGLSDRLGRVDTGKSPGPFPNNPAAA--VPRENITAW-MNAIGLIITALPEPYWIVL----------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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| References: | |
| 1. | Wei Zheng, Qiqige Wuyun, Yang Li, Quancheng Liu, Xiaogen Zhou, Yiheng Zhu, P. Lydia Freddolino, Yang Zhang. Integrating deep learning potentials with I-TASSER for single- and multi-domain protein structure prediction. Submitted. 2023. |