| >Q53GS9 (372 residues) KPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYF LEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQI TKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQL LHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTY KENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHK NTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWK RRDNDETNQQGA |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | KPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDNDETNQQGA |
| Prediction | CCCCCHHHHHHCCCCCCSCSCCCCCCCCCCCCCCSCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCSCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCSSSSSSSCCSCCSSSSSSSSCCCCCSSSSSSSSSSSCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCSSSSSSSSCCCCSSSSSSSCSSCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSSCCCCCCSSSSSSSSCCCCSSSSSSCCSSSSCCHHHCCCCCCSSSSSSSCCCCCCCCCCC |
| Confidence | 995998999844756420113689815578746414787468999999998389999999865313431368876035999999999999975677888628899999999862220478887899999999999999996368888764311233110010222563421354566899863789667556303530246666664110134333112124444211256532102444513189999621892329998523104984343891796687556775345676556789836899999997557999669999995899929998288436759998137785799999827986656899 |
| H:Helix; S:Strand; C:Coil | |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | KPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDNDETNQQGA |
| Prediction | 836144720550365254044155442110000020110100000000000000200200243213441444444121200410240242013464453101033003101432353044343200000000002202530563525633324412344143204202243031412230213424442343321000002222232223222220241032222045134421551453424021302034003000000000223433341044304011530304412255365345413030100000213241000000012465320010003304504464033550000002114566567658 |
| Values range from 0 (buried residue) to 8 (highly exposed residue) | |
| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SS Seq | CCCCCHHHHHHCCCCCCSCSCCCCCCCCCCCCCCSCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCSCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCSSSSSSSCCSCCSSSSSSSSCCCCCSSSSSSSSSSSCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCSSSSSSSSCCCCSSSSSSSCSSCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSSCCCCCCSSSSSSSSCCCCSSSSSSCCSSSSCCHHHCCCCCCSSSSSSSCCCCCCCCCCC KPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDNDETNQQGA | |||||||||||||||||||
| 1 | 3jcrV | 0.92 | 0.80 | 22.50 | 1.33 | DEthreader | YPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKR----IMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVCKKTFQIT--KQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTK--AEE---------K----EQQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNKTYKE-------NFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPSEEVQAVH------K----NTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRD--------- | |||||||||||||
| 2 | 6dgfA | 0.26 | 0.22 | 6.63 | 3.12 | SPARKS-K | ---------------------------AQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQ-RLYMRDLHHGSNAHTALVEEFAKLIQTIWTSSP-NDVVSPSEFKTQIQRYA-PRFVGYNQQDAQEFLRFLLDGLHNEVNRVDHLPDSRIGDLFVGQLKSSLTCT----------------DCGYCSTVFDPFWDLSLPIAKYP------------EVTLMDCMRLFTKEDVLDCCRCRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTNH----AVYNLYAVSNHSGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPSRM---- | |||||||||||||
| 3 | 2y6eA | 0.29 | 0.23 | 7.05 | 1.26 | MapAlign | --------------------------IQPGLCGLGNLGNT-FMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMGEIAEAYAELIKQMWSG--RDAHVAPRMFKTQVGRFA-PQFSGYQQQDSQELLAFLLDGLHEDLNRVRLRNDSVIVDTFHGLFKSTLVCPEC----------------AKVSVTFDPFCYLTLPLP--------------LTVALRDCIELFTTMETLPWCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVC--N-LSARPYVYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRD--------- | |||||||||||||
| 4 | 2ibiA | 0.26 | 0.21 | 6.47 | 0.87 | CEthreader | ---------------------------AQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAH-TALVEEFAKLIQTIWTSSPND-VVSPSEFKTQIQRYA-PRFVGYNQQDAQEFLRFLLDGLHNEVNRVLEREDSRIGDLFVGQLKSSLTCTDCG----------------YCSTVFDPFWDLSLPIA-----------KRGPEVTLMDCMRLFTKEDVLDGDRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTH-----AVYNLYAVSNHSGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELAS--------- | |||||||||||||
| 5 | 6dgfA | 0.24 | 0.21 | 6.53 | 2.32 | MUSTER | ---------------------------AQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS-NAHTALVEEFAKLIQTIWTSSP-NDVVSPSEFKTQIQRYA-PRFVGYNQQDAQEFLRFLLDGLHNEVNRVDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKYP------------EVTLMDCMRLFTKKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENT----NHAVYNLYAVSNHSGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPSRM---- | |||||||||||||
| 6 | 3jcrV | 0.97 | 0.89 | 24.94 | 2.36 | HHsearch | KPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMR----------------IFTKAEEEQQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNG-----KT-YKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRD--------- | |||||||||||||
| 7 | 6dgfA | 0.23 | 0.20 | 6.16 | 2.98 | FFAS-3D | ---------------------------AQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTI--WTSSPNDVVSPSEFKTQI-QRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKYPEVT------------LMDCMRLFTKEDVLDGCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASEN----TNHAVYNLYAVSNHSGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPSR----- | |||||||||||||
| 8 | 3i3tC | 0.21 | 0.16 | 5.12 | 1.52 | EigenThreader | ------------------------------HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQE--------VQELTEAFADVIGALWHPDSCEAVNPTRFRAVFQKYV--PSFSGYSQQDAQEFLKLLMERLHLEINRRLSREDSKIVDLFVGQLKSCLKCQAC---------------GYRSTTFEVFCDLSLPIPKKGFA---------GGKVSLRDCFNLFTKAPVCDRCRQKTRSTKKLTVQRFPRILVLHLN-RFSRGSIKKSSVG-VDFPLQRLSLG--------DFASSPVYQLYALCNHSGSVHYGHYTALCRCQT--GWHVYNDSRVSPVSENQVASSEGYVLFYQLM---------- | |||||||||||||
| 9 | 2gfoA | 0.26 | 0.21 | 6.54 | 2.72 | CNFpred | ----------------------------PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRNLLGHKGEVAEEFGIIMKALWTGQ--YRYISPKDFKITIGKIN-DQFAGYSQQDSQELLLFLMDGLHEDLNKAKQLNESIIVALFQGQFKSTVQCL----------------TCHKKSRTFEAFMYLSLPLAS------------TSKCTLQDCLRLFS-NNRFYCSHCRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPK---NNLKKYNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYTSL---------- | |||||||||||||
| 10 | 6dgfA | 0.27 | 0.22 | 6.70 | 1.17 | DEthreader | -----------A----------------QGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNA-HTALVEEFAKLIQTIWTSS-PNDVVSPSEFKTQIQRYAP-RFVGYNQQDAQEFLRFLLDGLHNEVNRV-EREDSRIGDLFVGQLKSSLTCTD----------------CGYCSTVFDPFWDLSLPIAK---Y---------PEVTLMDCMRLFTKEDVLDEKTGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFAS-E-NT--NHAVYNLYAVSNHSGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPP-SR---- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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| References: | |
| 1. | Wei Zheng, Qiqige Wuyun, Yang Li, Quancheng Liu, Xiaogen Zhou, Yiheng Zhu, P. Lydia Freddolino, Yang Zhang. Integrating deep learning potentials with I-TASSER for single- and multi-domain protein structure prediction. Submitted. 2023. |