| >Q5FVE4 (380 residues) MTGTPKTQEGAKDLEVDMNKTEVTPRLWTTCRDGEVLLRLSKHGPGHETPMTIPEFFRES VNRFGTYPALASKNGKKWEILNFQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAVT KDFKLTDKHETVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKPT VFIGVPQIWEKIHEMVKKNSAKSMGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAK TLVFSKVKTSLGLDHCHSFISGTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQN NYRLLSCGKILTGCKNMLFQQNKDGIGEICLWGRHIFMGYLESETETTEAIDDEGWLHSG DLGQLDGLGFLYVTGHIKEI |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | MTGTPKTQEGAKDLEVDMNKTEVTPRLWTTCRDGEVLLRLSKHGPGHETPMTIPEFFRESVNRFGTYPALASKNGKKWEILNFQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAVTKDFKLTDKHETVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKPTVFIGVPQIWEKIHEMVKKNSAKSMGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFISGTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQNKDGIGEICLWGRHIFMGYLESETETTEAIDDEGWLHSGDLGQLDGLGFLYVTGHIKEI |
| Prediction | CCCSCCCCCCHHHHHHHHHHCCCSSSSSCCHHHHHHHHHHHHHCCCCCSSSSSCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCSSSSSSCCCCCCCCCSSSSSHHHHHHHHHHHHHHCCCCCCCCSSSSSCHHHHHHHHHHHHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHCCCSSSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCSSSSSSCCCCCCHHHHHHHHHCCCSSSSSSCCCCCCCCSSSCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCSSSSSSCCCCCCCCCCCHHHHHHHCCCCCCCCCCCSSSSCCCCCSSSSSSCCCC |
| Confidence | 91313699999999324842493399975999999999999639999669982785746777899999997427642344237998745999955898899947887379999999999985488999947999662899999999999999722499966898667899999999699199840689999999999999966779999999999999999998751898861478999999999999985999479999467869979999999809919996272111510454178898578405779982899935899998179992697372218897898876177898467724798799929998410379 |
| H:Helix; S:Strand; C:Coil | |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | MTGTPKTQEGAKDLEVDMNKTEVTPRLWTTCRDGEVLLRLSKHGPGHETPMTIPEFFRESVNRFGTYPALASKNGKKWEILNFQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAVTKDFKLTDKHETVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKPTVFIGVPQIWEKIHEMVKKNSAKSMGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFISGTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQNKDGIGEICLWGRHIFMGYLESETETTEAIDDEGWLHSGDLGQLDGLGFLYVTGHIKEI |
| Prediction | 86001131432741311234040100104336105102401750451510000251246204303403500655653443155220100000030021144240000002000200200142051346500000010002000000000000000000000244232630250043030000000200021025203520673440032003102410341243345453523001000220003203730322100000000110254013002002000000130000000000023741300001201240101012277632000001221003411633720350037403020120030175120211523476 |
| Values range from 0 (buried residue) to 8 (highly exposed residue) | |
| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SS Seq | CCCSCCCCCCHHHHHHHHHHCCCSSSSSCCHHHHHHHHHHHHHCCCCCSSSSSCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCSSSSSSCCCCCCCCCSSSSSHHHHHHHHHHHHHHCCCCCCCCSSSSSCHHHHHHHHHHHHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHCCCSSSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCSSSSSSCCCCCCHHHHHHHHHCCCSSSSSSCCCCCCCCSSSCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCSSSSSSCCCCCCCCCCCHHHHHHHCCCCCCCCCCCSSSSCCCCCSSSSSSCCCC MTGTPKTQEGAKDLEVDMNKTEVTPRLWTTCRDGEVLLRLSKHGPGHETPMTIPEFFRESVNRFGTYPALASKNGKKWEILNFQKANQCAVLIYTSGTTGIPKGVMLSHDNITWIAGAVTKDFKLTDKHETVVSYLPLSHIAAQMMDIWVPIKIGALTYFAQADALKGTLVSTLKEVKPTVFIGVPQIWEKIHEMVKKNSAKSMGLKKKAFVWARNIGFKVNSKKMLGKYNTPVSYRMAKTLVFSKVKTSLGLDHCHSFISGTAPLNQETAEFFLSLDIPIGELYGLSESSGPHTISNQNNYRLLSCGKILTGCKNMLFQQNKDGIGEICLWGRHIFMGYLESETETTEAIDDEGWLHSGDLGQLDGLGFLYVTGHIKEI | |||||||||||||||||||
| 1 | 6eqoA | 0.14 | 0.11 | 3.69 | 1.00 | DEthreader | -------------GNPA-----ETWTGWD------ASSAAPIT---L-LPES-FEPWER------G-LTS--AAA-AGAPVLAVDAEYPNFIIYTSGSTGKPKGVVHVHGYASGVAATMPAAFGAE-PGDVMYVVADPGWITGQSYQIAASLLSRVTTVITEGSPVFPRFASIIERYGVNVFKAGVTFLKSVMQNPENLKD---------------------------------------------IQ-RYDLSSLKVATFCAEPVSPAVQAFAMEHTHRYINSYWATEHGGMVWTHFAFPLEADAHTYPLPWIMGDVWWRAEGEKGEIVILPYYLTRTIWGDEVRYADYWRGAWAYTQGDFAMRHPDGSFSLHGRSDDR | |||||||||||||
| 2 | 6e8oA | 0.18 | 0.15 | 4.91 | 1.71 | SPARKS-K | EVVFALFRLGALPVYALPAHRAHEITHLCTTAQAKALIIPDRHAG-----FDYRTMAAQLRHAFTPLAELRADRPDP-GVFTRPEASDAAFLQLSGGTTGLPKLIPRTHDDYLYSVRASAEICALG-TDTVYLAALPAVHNFPMSSGFLGTFHAGGTVVLAPNPSP-DTAFSLIETERVTITAVVPPIALQWLDAVEHGS-----------------------------------------------QSHRDLSSLRVLQVGGAKFAPEAARRVRPVLCTLQQVFGMAEGLVNYTRLDPDDIITTTQGRPISDDEIRIVDVPDGEVGHLLTRGPYTIRGYYRAEEHNATAFTPDGFYRTGDLVRRTPTGHLVVEGRAKDQ | |||||||||||||
| 3 | 6m2oA | 0.19 | 0.14 | 4.68 | 0.71 | MapAlign | ------------------------RPDKTAFVDDISSLSFAQ-------LEAQTRQLAAALRAIGVKREERVAIYAGIVPQAATQADDPAFWLYSSGSTGRPKGVVHTHANPYWTSELYRNTLHLR-EDDVCFSAAKLFFAYGLGNALTFPMTVGATTLLMGERPTPDAVFKRWLGVKPTVFYGAPTGYAGMLAA-----------------------------------------------------PNLPQVALRLASSAGEALPAEIGQRFQRFGLDIVDGIGSTEMLAAFLSNLPDRVRYGTTGWPVPGYQIELRGVADGEPGDLYIHGPSSATMYWGNRAKSRDTFQ-GGWTKSGDKYVRNDDGSYTYAGRTDDM | |||||||||||||
| 4 | 6m2oA | 0.17 | 0.15 | 4.84 | 0.41 | CEthreader | IVPVA-VNTLLTADDYAYMLEHSRAQAVLVSGALHPVLKAALTKSDHEVQRVIVSRPAAPLEPGEVDFAEFVGAHAPLEKPAATQADDPAFWLYSSGSTGRPKGVVHTHANPYWTSELYGRNTLHLREDDVCFSAAKLFFAYGLGNALTFPMTVGATTLLMGERPTPDAVFKRWGGVKPTVFYGAPTGYAGMLAAPN--------------------------------------------------LPSRDQVALRLASSAGEALPAEIGQRFQRHGLDIVDGIGSTEMLAAFLSNLPDRVRYGTTGWPVPGYQIELRGVADGEPGDLYIHGPSSATMYWGNRAKSRDTFQ-GGWTKSGDKYVRNDDGSYTYAGRTDDM | |||||||||||||
| 5 | 3tsyA1 | 0.25 | 0.19 | 5.96 | 1.31 | MUSTER | ----------------------------------DVIFRSKLPDIYIPNHLSLHDYIFQNISEFATKPCLINGPTGHYSDVHVISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDPNLYFHSDDVILCVLPMFHIYALNSIMLCGLRVGAAILIMPKF-EINLLLELIQRCKVTVAPMVPPIVLAIAKS--------------------------------------------------SETEKYDLSSIRVVKSGAAPLGKELEDAVNAKNAKLGQGYGMTEAGPVLAMSEPFPVKSGACGTVVRNAEMKIVDPDTGQPGEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLKE- | |||||||||||||
| 6 | 3tsyA | 0.24 | 0.20 | 6.23 | 1.39 | HHsearch | PFFTPAEIANTKLIITEARY---VDKIKPLQNDDGVVIVCDDNESIPEGCLRFTELTQ-----STT-EA------SEVIDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGELYFHSDDVILCVLPMFHIYALNSIMLCGLRVGAAILIMPKF-EINLLLELIQRCKVTVAPMVPPIVLAIAKSS--------------------------------------------------ETEKYDLSSIRVVKSGAAPLGKELEDAVNAFNAKLGQGYGMTEAGPVLAMSEPFPVKSGACGTVVRNAEMKIVDPDRNQPGEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLKEA | |||||||||||||
| 7 | 6ulwA1 | 0.21 | 0.18 | 5.77 | 2.67 | FFAS-3D | --GGDDVTQGAQTLQDVLTELKAGDPVFFQFSSGFVPTLVSAAPTYREMNAAVKK-LHHAWKLLEHPLILTDDSLERDTAAHPAAPDDSVFFILTSGSTGMPKCVEHSHRSVLANVKGTVAANQ-FTQEDVSLDWMPLDHIGGIVMFHLVNVYTGCEQIRARTDDFIAQWLDWMDRYRATKTWAPNFAFAMINDYEKEI-----------------------------------------------SSGSWDLSAMTCMINGAEAVVPKTIHRFLHLGDVIRPAFGMSEISSAVVFSFAIERSFTELGKPIPGITIRIVNHQEDHIGRVQIKGPTTMKGYYRNDEANQEVFQADGWFHTGDLGFLH-EGRLTLTGREKDM | |||||||||||||
| 8 | 4eatA1 | 0.16 | 0.13 | 4.45 | 1.00 | EigenThreader | PPPEKFNFAEHLLQTN-----RVRPDKTAFVDDISSLSFAQLEAQTRQLAAALRAIVLKAALTKSDHEV----QHAPLEKPAATQADDPAFWLYSSGSTGRPKGVVHTHANPYWTSELYGRNTLHLREDDVCFSAAKLFFAYGLGNALTFPMTVGATTLLMGE---RPTPDAVFKRWLPTVFYGAPTGYAGMLAA--------------------------------PNLPSRD------------------QVALRLASSAGEALAEIGQRFQRHFGLDIVDGIGSTEMLHIFLSNLPDRVRYGTTGWPVPGYQIELRGDGGGPVADLYIHGPSSATMYWGNRAKSRDTFG---WTKSGDKYVRNDDGSYTYAGRTDDM | |||||||||||||
| 9 | 1md9A | 0.15 | 0.12 | 3.88 | 2.19 | CNFpred | ----------------------------------AAYIIPDAY------GFDYRSLARQVQSKLPTLKNIIVAGEEEFLPLE-VKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLD-HSTVYLAALPMAHNYPLSSGVLGVLYAGGRVVLSPSP-SPDDAFPLIEREKVTITALVPPLAMVWMDAASSR--------------------------------------------------RDDLSSLQVLQVGGAKFSAEAARRVKAVGCTLQQVFGMAEGLVNYTRLDDPEIIVNTQGKPMSYDESRVWDVKPGETGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTGDIVRLTRDGYIVVEGRAKDQ | |||||||||||||
| 10 | 6eqoA1 | 0.14 | 0.11 | 3.69 | 1.00 | DEthreader | -------------GNPA-----ETWTGWD------ASSAAPIT---L-LPES-FEPWER------G-LTS--AAA-AGAPVLAVDAEYPNFIIYTSGSTGKPKGVVHVHGYASGVAATMPAAFGAE-PGDVMYVVADPGWITGQSYQIAASLLSRVTTVITEGSPVFPRFASIIERYGVNVFKAGVTFLKSVMQNPENLKD---------------------------------------------IQ-RYDLSSLKVATFCAEPVSPAVQAFAMEHTHRYINSYWATEHGGMVWTHFAFPLEADAHTYPLPWIMGDVWWRAEGEKGEIVILPYYLTRTIWGDEVRYADYWRGAWAYTQGDFAMRHPDGSFSLHGRSDDV | |||||||||||||
| ||||||||||||||||||||
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
| References: | |
| 1. | Wei Zheng, Qiqige Wuyun, Yang Li, Quancheng Liu, Xiaogen Zhou, Yiheng Zhu, P. Lydia Freddolino, Yang Zhang. Integrating deep learning potentials with I-TASSER for single- and multi-domain protein structure prediction. Submitted. 2023. |