| >Q6P1A2 (375 residues) MASSAEGDEGTVVALAGVLQSGFQELSLNKLATSLGASEQALRLIISIFLGYPFALFYRH YLFYKETYLIHLFHTFTGLSIAYFNFGNQLYHSLLCIVLQFLILRLMGRTITAVLTTFCF QMAYLLAGYYYTATGNYDIKWTMPHCVLTLKLIGLAVDYFDGGKDQNSLSSEQQKYAIRG VPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGELIDIPGKIPNSIIPALKRLSLGLFY LVGYTLLSPHITEDYLLTEDYDNHPFWFRCMYMLIWGKFVLYKYVTCWLVTEGVCILTGL GFNGFEEKGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYIFKRLKFLGNKE LSQGLSLLFLALWHG |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | MASSAEGDEGTVVALAGVLQSGFQELSLNKLATSLGASEQALRLIISIFLGYPFALFYRHYLFYKETYLIHLFHTFTGLSIAYFNFGNQLYHSLLCIVLQFLILRLMGRTITAVLTTFCFQMAYLLAGYYYTATGNYDIKWTMPHCVLTLKLIGLAVDYFDGGKDQNSLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGELIDIPGKIPNSIIPALKRLSLGLFYLVGYTLLSPHITEDYLLTEDYDNHPFWFRCMYMLIWGKFVLYKYVTCWLVTEGVCILTGLGFNGFEEKGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYIFKRLKFLGNKELSQGLSLLFLALWHG |
| Prediction | CCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCHHHSCCCHCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCHHHHHHHHCCHHHHHHHHHSSSSCCCCCCCHHHHHHHHHHHHHHCC |
| Confidence | 986335776621012300146787602899999849997899999999999999999999536788679999999999999999998789999999999999999808874136789999989999999986278876330246678887777765555441266554575666554315876999999999602320078302999999981856567777775289999999999999999999987603554068047775899999999999999999999999999999999189888888777746666301453501157999999998271799999986134078889742899999999996349 |
| H:Helix; S:Strand; C:Coil | |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | MASSAEGDEGTVVALAGVLQSGFQELSLNKLATSLGASEQALRLIISIFLGYPFALFYRHYLFYKETYLIHLFHTFTGLSIAYFNFGNQLYHSLLCIVLQFLILRLMGRTITAVLTTFCFQMAYLLAGYYYTATGNYDIKWTMPHCVLTLKLIGLAVDYFDGGKDQNSLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGELIDIPGKIPNSIIPALKRLSLGLFYLVGYTLLSPHITEDYLLTEDYDNHPFWFRCMYMLIWGKFVLYKYVTCWLVTEGVCILTGLGFNGFEEKGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYIFKRLKFLGNKELSQGLSLLFLALWHG |
| Prediction | 744425353332231231034202421032006204043420100001321111000010002354120100000000221013032331110121112100000003443100000011000100001001102323020100000001210000100120314566146423220022122001000000000000000112032013104342243644223101100200010001110111001102121222430212000101111110131131100000000000000000003333662424141032030110010420220041011000200020003203344432100000002102407 |
| Values range from 0 (buried residue) to 8 (highly exposed residue) | |
| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SS Seq | CCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCHHHSCCCHCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCHHHHHHHHCCHHHHHHHHHSSSSCCCCCCCHHHHHHHHHHHHHHCC MASSAEGDEGTVVALAGVLQSGFQELSLNKLATSLGASEQALRLIISIFLGYPFALFYRHYLFYKETYLIHLFHTFTGLSIAYFNFGNQLYHSLLCIVLQFLILRLMGRTITAVLTTFCFQMAYLLAGYYYTATGNYDIKWTMPHCVLTLKLIGLAVDYFDGGKDQNSLSSEQQKYAIRGVPSLLEVAGFSYFYGAFLVGPQFSMNHYMKLVQGELIDIPGKIPNSIIPALKRLSLGLFYLVGYTLLSPHITEDYLLTEDYDNHPFWFRCMYMLIWGKFVLYKYVTCWLVTEGVCILTGLGFNGFEEKGKAKWDACANMKVWLFETNPRFTGTIASFNINTNAWVARYIFKRLKFLGNKELSQGLSLLFLALWHG | |||||||||||||||||||
| 1 | 6bugC | 0.14 | 0.11 | 3.85 | 1.17 | DEthreader | ----------M--ID-F--LKQLPH--L-------------EPYGNFYFYLGIALLPIFIGLFFKKR-FA-IYECLVSITFIVLALILALLFYIVWQIIWVYSKRYRSRDNWVFYLHSFLVVLPLILVKVEPTNGTQSLLNFLGISYLTFRAVGMIIEMRDG--------------VLK-EFTLGEFLRFMLFMPTFTSGPIDRFKRFNEDYQ-SI-PNRDELLNMLEQAVKYIMLGFLYKFVAQIFGSMLLPPLKAQLSQGGIFNLPTLGVMYVYGFDLFFDFAGYSMFALAVSNLMGIK-------------SPINFD-K-PFISRDMKEFWNRWHMSLSFWFRDFVFMRLIVMRKTSVAYIINMMVMGFWHY | |||||||||||||
| 2 | 6bugC | 0.14 | 0.12 | 4.00 | 1.86 | SPARKS-K | ----------------------------MIDFLKQLPHLEPYGNPFYFIYLGIALLPIFIGLFFKKRF--AIYECLVSITFIVLALTSQILALLFYIVWQIIWVYSYKRYRSQFYLHSFLVVLPLILVKVEPTINGTQSLNFLGISYLTFRAVGMIIEMRDGVLKE---------------FTLGEFLRFMLFMPTFTSGPIDRFKRFNEDYQSIPNR--DELLNMLEQAVKYIMLGFLYKFVLAQIFGSMLLPPLKAQALSQGFNLPTLGVMYVYGFDLFFDFAGYSMFALAVSNLMGIKSPINFDK---------------PFISRDMKEFWNRWHMSLSFWFRDFVFMRLVRNKVSNVAYIINMMVMGFWHG | |||||||||||||
| 3 | 6bugC | 0.11 | 0.09 | 3.19 | 1.26 | MapAlign | -------------------IDFLKQ----------------LPHLEPYFIYLGIALLPIFIGLFFKK-RFAIYECLVSITFIVLALLALLFYIVWQIIWVYSYKRYRRDNKWVFYLHSFLVVLPLILVKVEPTINGTQSLLNFLISYLTFRAVGMIIEMR--------------DGVL-KEFTLGEFLRFMLFMPTFTSGPIDRFKRFNEDYQ--SIPNRDELLNMLEQAVKYIMLGFLYKFLAQIFGSMLLPPLK--AQALSQFNLPTLGVMYVYGFDLFFDFAGYSMFALAVSNLMGIK-------------SPINFD--KPFISRDMKEFWNRWHMSLSFWFRDFMMVMGFWHYYIAYGIFHGIGLVINDAW | |||||||||||||
| 4 | 6bugC | 0.12 | 0.10 | 3.66 | 1.23 | CEthreader | --------------------------MIDFLKQLPHLEPYGNPFYFIYLGIALLPIFIGLFFKKRFAIYECLVSITFIVLALTGTHASQILALLFYIVWQIIWVYSYKDNKWVFYLHSFLVVLPLILVKVEPTIGTQSLLNFLGISYLTFRAVGMIIEMRDGVLK---------------EFTLGEFLRFMLFMPTFTSGPIDRFKRFNEDYQSIPNRDE--LLNMLEQAVKYIMLGFLYKFVLAQIFGSMLLPPLKAQALSQGG--IFNLPTLGVMYVYGFDLFFDFAGYSMFALAVSNLM---------GIKSPINFD--KPFISRDMKEFWNRWHMSLSFWFRDFVFMRLVIVLTSNVAYIINMMVMGFWHG | |||||||||||||
| 5 | 6bugC | 0.14 | 0.12 | 4.00 | 1.19 | MUSTER | --------------------------MIDFLKQLPHLEPNPFYFIYLGIALLPIFIGLFF---KKR---FAIYECLVSITFIVLALTSQILALLFYIVWQIIWVYSYKDNKWVFYLHSFLVVLPLILVKVEPTIGTQSLLNFLGISYLTFRAVGMIIEMRDGVL---------------KEFTLGEFLRFMLFMPTFTSGPIDRFKRFNEDYQSIP--NRDELLNMLEQAVKYIMLGFLYKFVLAQIFGSMLLPPLKAQALSQGFNLPTLGVMYVYGFDLFFDFAGYSMFALAVSNLMGIKSP-------------INFD--KPFISRDMKEFWNRWHMSLSFWFRDFVFMRLVIVLMSNVAYIINMMVMGFWHG | |||||||||||||
| 6 | 6bugC | 0.13 | 0.11 | 3.71 | 6.23 | HHsearch | ----------------------MIDFL-KQL--PHLEPYGNPFYIYLGIALLPIFIGLFF-KK---R--FAIYECLVSITFIVLALTGQILALLFYIVWQIIWVYSYKRYKWVFYLHSFLVVLPLILVKVEPTINTQSLLNFLGISYLTFRAVGMIIEMRDGVLK---------------EFTLGEFLRFMLFMPTFTSGPIDRFKRFNEDYQSIPNRD--ELLNMLEQAVKYIMLGFLYKFVLQIFGSMLL-PPLKAQALGGIF----NLPTLGVMYVYGFDLFFD--FAGYSMFALAVSNL-------MGIKSPINFDKP--FISRDMKEFWNRWHMSLSFWFRDFVFMRLVIVKNSNVAYIINMMVMGFWHG | |||||||||||||
| 7 | 6bugC | 0.15 | 0.13 | 4.22 | 2.46 | FFAS-3D | --------------------------MIDFLKQLPHLEPNPFYFIYLGIALLPIFIGL---FFKKRFAIYECLVSITFIVLALTGTASQILALLFYIVWQIIWVYSYRDNKWVFYLHSFLVVLPLILVKVEPTIGTQSLLNFLGISYLTFRAVGMIIEMRDGVLKE---------------FTLGEFLRFMLFMPTFTSGPIDRFKRFNEDYQSIP--NRDELLNMLEQAVKYIMLGFLYKFVLAQIFGSMLLPPLKAQALSGIFNLPTLGVMYVYGFDLFFDFAGYSMFALAVSNLMGIKSPINFDK---------------PFISRDMKEFWNRWHMSLSFWFRDFVFMRLVIVLMRNVAYIINMMVMGFWHG | |||||||||||||
| 8 | 6vp0C | 0.11 | 0.09 | 3.09 | 1.28 | EigenThreader | SDSGFSNYRGILNWCVVMLILSNARLFLENLIKYGILVD-----------PIQVVSLFLKDPYS----------------------WPAPCLVIAANVFAVAAFQVEKRLAVLHVANLATILCFPAAVVLLV--ESITPVGSLLALMAHTILFLKLFSYRDVN---------SWCRRARALTYRDLYYFLFA--------PTLCY---------ELNFPRSPRIREMLFFTQLQVGLIQQWMVPTIQNSMKPF----KD-----MD------YSRIIERLLKLAVPNHLIWLIFFYWLFHSCLNAVAELMQFGDREFYRDWW---NSESVTYFWQNWNIPVHKWCIRHFYKPMLRRSSKWMARTGVFLASAFFHE | |||||||||||||
| 9 | 3rkoB | 0.10 | 0.09 | 3.45 | 1.47 | CNFpred | RGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANG-LVLDGLSLTMLSVVTGVGFLIHMYASWYMYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGAAMKAFVVTRVGDVFLAFALFILYNEGTLNFR-NMLMWATLMLLGGAVGKSAQ---------LQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVL-------HLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQ------IGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILA---HHEQNIFKMGGLRKSIPLVYLCFLVGGAALSATAGFFSKDEILAGAMAHINLMVAGLVGAFMTSLYTF | |||||||||||||
| 10 | 6vp0C | 0.11 | 0.08 | 2.79 | 1.00 | DEthreader | ---------------------------------ENL-----G--VDP------------------------------------WPAPCLVIAANVFAVAAFQVEKRLATEQAGLLLHVANLATILCFPAAVVLLVEITPGALMAHTILFLKLFSYRDVNSWCRRARAK------TVSYPDNLTYRDLYYFL-F-AP----TLCYEL--NFP----R-S----PRIRKRFLLRRILEMLFFTQLQVGLIQWMVPTIQSMKPFMDRIIERLLKLAVPNHLIWLIFFYWLFHSCLNAVAELMQF-----------GD-REFYR-DW-WNSESVTYFWQNWNIPVHKWCIRHFYKPMLRRGSSKMARTGVFLASAFFHE | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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| References: | |
| 1. | Wei Zheng, Qiqige Wuyun, Yang Li, Quancheng Liu, Xiaogen Zhou, Yiheng Zhu, P. Lydia Freddolino, Yang Zhang. Integrating deep learning potentials with I-TASSER for single- and multi-domain protein structure prediction. Submitted. 2023. |