| >Q8IY82 (422 residues) MEVLREKVEEEEEAEREEAAEWAEWARMEKMMRPVEVRKEEITLKQETLRDLEKKLSEIQ ITVSAELPAFTKDTIDISKLPISYKTNTPKEEHLLQVADNFSRQYSHLCPDRVPLFLHPL NECEVPKFVSTTLRPTLMPYPELYNWDSCAQFVSDFLTMVPLPDPLKPPSHLYSSTTVLK YQKGNCFDFSTLLCSMLIGSGYDAYCVNGYGSLDLCHMDLTREVCPLTVKPKETIKKEEK VLPKKYTIKPPRDLCSRFEQEQEVKKQQEIRAQEKKRLREEEERLMEAEKAKPDALHGLR VHSWVLVLSGKREVPENFFIDPFTGHSYSTQDEHFLGIESLWNHKNYWINMQDCWNCCKD LIFDLGDPVRWEYMLLGTDKSQLSLTEEDDSGINDEDDVENLGKEDEDKSFDMPHSWVEQ IE |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | MEVLREKVEEEEEAEREEAAEWAEWARMEKMMRPVEVRKEEITLKQETLRDLEKKLSEIQITVSAELPAFTKDTIDISKLPISYKTNTPKEEHLLQVADNFSRQYSHLCPDRVPLFLHPLNECEVPKFVSTTLRPTLMPYPELYNWDSCAQFVSDFLTMVPLPDPLKPPSHLYSSTTVLKYQKGNCFDFSTLLCSMLIGSGYDAYCVNGYGSLDLCHMDLTREVCPLTVKPKETIKKEEKVLPKKYTIKPPRDLCSRFEQEQEVKKQQEIRAQEKKRLREEEERLMEAEKAKPDALHGLRVHSWVLVLSGKREVPENFFIDPFTGHSYSTQDEHFLGIESLWNHKNYWINMQDCWNCCKDLIFDLGDPVRWEYMLLGTDKSQLSLTEEDDSGINDEDDVENLGKEDEDKSFDMPHSWVEQIE |
| Prediction | CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCSSSCCCCCHHHHHHHHHHCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCSSSSCCCCCCCSSSSCCSSSCCCCCCCCCCCHHHHHHHHHHHCSSSSCCCCCCCCCSSCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCSSSSSSCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCSSSSSSSSSCCCCCCCCCSSSCCCCCCSCCCCCCCCCSSSSSSCCCSSSSSSCCCCCCCCCSSSCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC |
| Confidence | 90677888888887764047865421100124787400033036602578998753023564278764112012552349943125996999999999999999999756345235653788885013434242135774113899999999997113464378777754203818988751677899999999987168974079962136430331111356888775333565433456665566787534340234567899999999987533344556666413677733472356899984587777755112367885047888775347899716527998147876533215516884333422689984234653222222113543344444555543268864221259 |
| H:Helix; S:Strand; C:Coil | |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | MEVLREKVEEEEEAEREEAAEWAEWARMEKMMRPVEVRKEEITLKQETLRDLEKKLSEIQITVSAELPAFTKDTIDISKLPISYKTNTPKEEHLLQVADNFSRQYSHLCPDRVPLFLHPLNECEVPKFVSTTLRPTLMPYPELYNWDSCAQFVSDFLTMVPLPDPLKPPSHLYSSTTVLKYQKGNCFDFSTLLCSMLIGSGYDAYCVNGYGSLDLCHMDLTREVCPLTVKPKETIKKEEKVLPKKYTIKPPRDLCSRFEQEQEVKKQQEIRAQEKKRLREEEERLMEAEKAKPDALHGLRVHSWVLVLSGKREVPENFFIDPFTGHSYSTQDEHFLGIESLWNHKNYWINMQDCWNCCKDLIFDLGDPVRWEYMLLGTDKSQLSLTEEDDSGINDEDDVENLGKEDEDKSFDMPHSWVEQIE |
| Prediction | 46303640565443446443447335426633542524544341466315504540450514136524503565143551242144326214100300440241026215632201020434441421001102013112340230620031012003102034354344102002000333412001000000000012412000000213441112223543141325544446655454654151543550334135435434355245555545554554345355354342332301010001134451551000102114416163430200100002400000014536303301010533620220024353633435554545376654255455443441060113116528 |
| Values range from 0 (buried residue) to 8 (highly exposed residue) | |
| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SS Seq | CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCSSSCCCCCHHHHHHHHHHCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCSSSSCCCCCCCSSSSCCSSSCCCCCCCCCCCHHHHHHHHHHHCSSSSCCCCCCCCCSSCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCSSSSSSCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCSSSSSSSSSCCCCCCCCCSSSCCCCCCSCCCCCCCCCSSSSSSCCCSSSSSSCCCCCCCCCSSSCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC MEVLREKVEEEEEAEREEAAEWAEWARMEKMMRPVEVRKEEITLKQETLRDLEKKLSEIQITVSAELPAFTKDTIDISKLPISYKTNTPKEEHLLQVADNFSRQYSHLCPDRVPLFLHPLNECEVPKFVSTTLRPTLMPYPELYNWDSCAQFVSDFLTMVPLPDPLKPPSHLYSSTTVLKYQKGNCFDFSTLLCSMLIGSGYDAYCVNGYGSLDLCHMDLTREVCPLTVKPKETIKKEEKVLPKKYTIKPPRDLCSRFEQEQEVKKQQEIRAQEKKRLREEEERLMEAEKAKPDALHGLRVHSWVLVLSGKREVPENFFIDPFTGHSYSTQDEHFLGIESLWNHKNYWINMQDCWNCCKDLIFDLGDPVRWEYMLLGTDKSQLSLTEEDDSGINDEDDVENLGKEDEDKSFDMPHSWVEQIE | |||||||||||||||||||
| 1 | 3isrB | 0.10 | 0.06 | 2.36 | 0.93 | CEthreader | -------------------LYFQSNAKFKIHSDITYQVSPTTFIFNVHALRTESQHILDESLIVTPPIEIEEFSYNSGTSRFVRLKATENTTKVIDQRQELETVPVVDLDGDIIPFLFPSRYCQSDKLQKLAYKEFGKIENVYSKVLAITDWIYNNVEYIS-----GSTNSQTSAFDTITERAGVCRDFAHLGIALCRALSIPARYFTGYAF----------------------------------------------------------------------------------KLNPPDFHACFEAYIG----GNWIIFDATRLV----PLNGLVKIATGRDAADAAVASITNHVECASLDTDFTPFWYDKNSLKGLSFQ----------------------------------------- | |||||||||||||
| 2 | 2f4mA | 0.07 | 0.04 | 1.70 | 0.77 | EigenThreader | GDSTILKVLQSNIQHVQLYEN------------------------PVLQEKALTCI-------PVSELKRKAQEKLFRARKLDKGTNVSFLLLELLHWFKEE-----------FFRWVIVCSKCGGETRSRDEALLPND-------------DELKWGAK-------NACQYNNPEKLLETRCGRCGEWANCFTLCCRAL--GFEARYVWDY--------------------------------------------------------------------------------------TDHVWTEVYSPSQ----QRWLCDACEDVCD--KGKKLSYIIAFS-KDEVVDVYSCKHDEVMSRR-TKVKEELLRETINGLNKQRQLSL------SESRRKELLQRIIVELVEFISPKTPRPGLE | |||||||||||||
| 3 | 6em5I | 0.11 | 0.06 | 2.24 | 0.60 | FFAS-3D | -----EKILQKEDIADLVTKVMENTAALGRLCKMVE--SKNPNTCKFSMLALVPVFKSI---IPGYRIR-----------PLEVSKLRNFEQALVYNYKNYVGRLQSLSKTPSN---AAPIQVSLGILATQAAKELISTASHFNFRTDIFTLLLRRICKPRISTDPTSIQIIQTFETLLNEDEEGSISFEIL--------------------RIFNKILKTRN---FNIEESVLNMLLSLDVLHDYDKKKDRVHLSKKQRKARKEMQQIEEEMRNAEQAVSAEERERNQSE----------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
| 4 | 6eqoA | 0.15 | 0.12 | 4.05 | 0.71 | SPARKS-K | MELLGQAAPEHAGLIRSEVAGLLGVGKALTAIASGEAAGGAMTQAAQLRIAIASALVRVDAVVVVKHTAQP-DLPWNEARDHWSHDLTAAGEELLKAARDFVRAIWAGAP---VLAVDA----EYPNFIIYTSGSTGKPKGVVHVHGGYASGVAATMPAAFGAEPGDVMYVVADP--------GWITGQSYQIA-ASLLSRVTTVITEGHAGRFASIIERYGVNV--------------------FKAG------VTFLKSVMQNPENLKDIQ-------------------RYDLSSLKV---------------ATFC------AEPVSTHRY--INSYWATEHVWTHFAGFPLEADAHTYPL----PWIMVWVEDADGSSNGPVEYE---RDTPWRVAEDGEKGEIVIALPYPYLTRTI | |||||||||||||
| 5 | 4fgoA | 0.13 | 0.05 | 1.71 | 0.99 | CNFpred | ---------------------------------------------VEKIQKLAQSYQ----------------------------------GDTRKRFTAWGNLIDSLKK---------------------------------KPVKIQLEKVNSFFNFNYETDPIASDDYWKSPVEFIVDGGGDCEDFAIIKYFTLVAVGVPSQLRITYAASLT----------------------------------------------------------------------------------LNQAHMVLSFYPTP--ESEPLILDSLESKILKASARPDLKPVYSFNAEGLWLAKT---------------------------------------------------------------------- | |||||||||||||
| 6 | 4s3pA | 0.05 | 0.03 | 1.37 | 0.67 | DEthreader | ------------ATKVAVTPVP-NVMVYMYVIVAP-KRCYEPQALLNKQKLWG-ACV-L-TLRSEKNW-----------------------G--IGDFGDLKAMLVVAGSFIGLNPIHALYPANPESASPYSP---------------------------GDSLFWQAFDAHAMRWGWPAWEGGETLYCLASVGAPPDGPLGQNWGL-------PMDPHIITA-----------------------------------------------------------------A--E-FIELLRANRIDHVMS--------MLRLWWIYVHYPVDLLSILSMVIGEDLG-----------LRSSGVYSYKVLSMAVAATHDLPTLGYWKLLLHCLPKAGHKASLMSMTNDDMAEPVNIPTSY----- | |||||||||||||
| 7 | 3d9wA | 0.10 | 0.04 | 1.59 | 0.95 | MapAlign | --------------------------------------------------------------------------------------------------------------------------------PAYHWNGLDLAPTLAT-LRELVYRHTTAIPFENLEAVLGRPVRLDLLQDLVHSRGGYCYENAGLFAAALERLGFGVTGHTGRVT--MG-----------------------------------------------------------------------------AGGLRPATHALLRVTT--ADDDRVWMCDVGPLRPYELRVDRYTFTHHVLDGLTLITER---------------PDGSADIRALTPGELPEVINELFDIELPGPDLDALTTGSWLER------------- | |||||||||||||
| 8 | 3tnfB | 0.11 | 0.09 | 3.26 | 0.58 | MUSTER | IKRAQENIKKGEELEKKLDKLERQGKDLEDKYKTYELLTDSEELSLSEINEKMEAFSK-------DSEKLTQLMEKHKGDEKTVQSLQREHHDIKAKLANLQVLHDAHTGKK-----SYVNEKGNPVSSLKDAHLAINKDQEVVEHEGQFYL----LQKGQWDAIKNNPAALEKAQKDYSQS---KHDLATIKMEALI-------------HKLSLEMEKQLETINNLIMSTDPKENEEAT---------------KLLHKHNGLNLKLANLQDMLAVHRKEKSFFNEKGEEVTSLNDAH-----YVIGKDQQLFNL-------GKFYPIHKE---QKILEKDGKFYLLK----GEDWESIK---DSPEKQEHDFHKLQYETPMTGLETTIHKERVEETKQQLEDNGKEKIEI-----NNIS | |||||||||||||
| 9 | 4fgoA | 0.14 | 0.06 | 2.02 | 2.77 | HHsearch | ---------------------------------------------------------------------ISVEKI--QKLAQSYQGDTRKR--FTAWG----NLIDSLK-----------------------------KKPVKIQLEKVNSFFN-QFNYETDPITGASDDYWKSPVEFIVDGGGDCEDFAIIKYFTLVAVGVPSDQLRTYAASL----------------------------------------------------------------------------------TLNQAH-VLSFYPTP--ESEPLILDSLESKILKASARDLKPV-YSFNAEGLWLAKTRG-ES-------SLSLGKWDALKRE--------------------------------------------- | |||||||||||||
| 10 | 3lnbA1 | 0.12 | 0.06 | 2.01 | 0.84 | CEthreader | -----------------------------------------------------------------------------------------------------------------------MMTNLQKEFFKRLKIPAKEI--TFNDLDEILLNMGMILPFENLDIMAGTIKNILVEKLLIQKRGGLCYELNSLLYYFLMDCGFQVYKVAGTVYD-----------------------------------------------------------------------------LYDNKWKPDDGHVIIILHHN----KKDYVIDAGFASHLPLHPVPFSGEVISSQTGEYRIRKRTTQKG------------THILEMRKDEWKIGYAFTLDPIDEQKVNNIQKVIVEHKESPFNK--------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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| References: | |
| 1. | Wei Zheng, Qiqige Wuyun, Yang Li, Quancheng Liu, Xiaogen Zhou, Yiheng Zhu, P. Lydia Freddolino, Yang Zhang. Integrating deep learning potentials with I-TASSER for single- and multi-domain protein structure prediction. Submitted. 2023. |