| >Q8N3Y3 (397 residues) MLPRGRPRALGAAALLLLLLLLGFLLFGGDLGCERREPGGRAGAPGCFPGPLMPRVPPDG RLRRAAALDGDPGAGPGDHNRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSML FYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYG LMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNL WKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSLPATSLADQDIFNAV IKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVEFFRNFY LTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLD |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | MLPRGRPRALGAAALLLLLLLLGFLLFGGDLGCERREPGGRAGAPGCFPGPLMPRVPPDGRLRRAAALDGDPGAGPGDHNRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSMLFYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYGLMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSLPATSLADQDIFNAVIKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVEFFRNFYLTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLD |
| Prediction | CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCSSSSSSSSCCCCHHHHHHHHHHHHHHHCCCCSSSSSSSCCCCHHHHHHHHHHHHHHCCSSSSSSCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCSSSSSSCCSSSSCCHHHHHHHHHCCCCCCSSSSSSCCCCCCHHHHHHHHCCCCCCCCCSCSSSSSSSHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCSSSSCCCCCCSSCCCCCHHHHHHHCCCCCSSSSSCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC |
| Confidence | 9987785313789999999999887516631013454112113566677765445578765433211126655671443134457777778888628999997594129999999999998389958999995999989999999984531747999973443333213554101329999999999971325776999939988818999999863146776335454033432123456651477655786022899863899987419999999999974224655667607999999618660675483114214875236664422379779971699998543455337899999998178078887630777678985289999987429 |
| H:Helix; S:Strand; C:Coil | |
| Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | MLPRGRPRALGAAALLLLLLLLGFLLFGGDLGCERREPGGRAGAPGCFPGPLMPRVPPDGRLRRAAALDGDPGAGPGDHNRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSMLFYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYGLMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSLPATSLADQDIFNAVIKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVEFFRNFYLTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLD |
| Prediction | 7233332430200000000010000001314214454444435544234434344326534423243144444432443455624365553654310000000002200310000000001004220100000030257105400530424414222030541254045244532120000000000000243111000000000011204302510352353110000121242223221243241443430000000000022025440242023004423342430221210000000022242013012410000022223521363353010000126331124253141023003102504352034201413453454354035116638 |
| Values range from 0 (buried residue) to 8 (highly exposed residue) | |
| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SS Seq | CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCSSSSSSSSCCCCHHHHHHHHHHHHHHHCCCCSSSSSSSCCCCHHHHHHHHHHHHHHCCSSSSSSCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCSSSSSSCCSSSSCCHHHHHHHHHCCCCCCSSSSSSCCCCCCHHHHHHHHCCCCCCCCCSCSSSSSSSHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCSSSSCCCCCCSSCCCCCHHHHHHHCCCCCSSSSSCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC MLPRGRPRALGAAALLLLLLLLGFLLFGGDLGCERREPGGRAGAPGCFPGPLMPRVPPDGRLRRAAALDGDPGAGPGDHNRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSMLFYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYGLMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSLPATSLADQDIFNAVIKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVEFFRNFYLTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLD | |||||||||||||||||||
| 1 | 6u4bA | 0.13 | 0.12 | 4.01 | 1.42 | MapAlign | -TNMFVMRKDIFVDYSEWLFSILDNL--------EDAISMNNYNAQEKRVIGHIAERLFNIYIIKLQQDGELKVKELQRTFVSNETFNGALNPVFAVPVVIS-FDDNYAISGGALINSIIRHADKNYDIVVLENKVSYLNKTRLVNLTAHPNVSLRFFDVNAFTEIVHTRA---HFSASTYARLFIPQLF-RRYDKVVFIDSDTVVKADLGELLD-V-PLG-NNLVAAVKDIEGFVKFSAMSASDTLNMPDEYFQAGIIVFNVKQMVEENTFAELMRVLKA-----KKYWFLDQDIMNKVFY---SRVTFLPLEWNVYHNLKFATYMKFAARKKPKMIHYAGENKPW--NTEKVDFYDDFIENIANTPWE-----------------MEIYKRQ--- | |||||||||||||
| 2 | 6u4bA | 0.15 | 0.10 | 3.40 | 1.00 | DEthreader | DEE-----------------------------------------------------------------------------------------FDSAVPVVIS-FDDNYAISGGALINSIIRHADKNYDIVVLENKVSYLNKTRLVNLTSAHNVSLRFFDVNAFTEIVHTRA-H-F-SASTYARLFIPQLFRR-YDKVVFIDSDTVVKADLGELLDV--PLG-NNLVAAVKDIVMGFVAMSAVMYKTLNMPDEYFQAGIIVFNVKQMVEENTFAELMRVLKA-K----KYWFLDQDIMNKVFY--S-RVTFLPLEWNVYHGNTDFPYMFLAARKKPKMIHYAGENKPWNTEKV-D-FYDDFIENIAN-TPWEMEIYK--M------------------ | |||||||||||||
| 3 | 6u4bA | 0.16 | 0.13 | 4.35 | 3.59 | HHsearch | NYNAQEKRVIGHIAERLFNIYIIKLQQDGEL---KVKEL-----QRTFVSNETFNGAL------------------------------NPVFD-SAVPVVI-SFDDNYAISGGALINSIIRHADKNYDIVVLENKVSYLNKTRLVNLTSHPNVSLRFFDVNAFTEIVH--TRAHFS-ASTYARLFIPQLFR-RYDKVVFIDSDTVVKADLGELLDV--PL-GNNLVAAVKDIVGFVKSEYLQKTLNMNNPDEYFQAGIIVFNVKQMVEENTFAELMRVLKA-----KKYWFLDQDIMNKVFYSR---VTFLPLEWNVYHGNGNTDDFFLAARKKPKMIHYAGENKPWNTEK--VDFYDDFIENIANTPWEMEIYKRQMS------------------ | |||||||||||||
| 4 | 1ss9A | 0.14 | 0.10 | 3.26 | 1.38 | SPARKS-K | -------------------------------------------------------------------------------------------------MDIVFAADDNYAAYLCVAAKSVEAAHPTEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNP--EDFAGFPLNIHISITTYARLKLGEYIA-DCDKVLYLDIDVLVRDSLTPLWD--TDLGDNW-LGACIDLFVERQEGYKQKIG-MADGEYYFNAGVLLINLKKWRRHDIFKMSCEWVEQYK---DVMQYQDEDILNGLFKGG---VCYANSRFNFMPTNDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAW-GAERFTELAGSLTTVPEEWRGKL------------------- | |||||||||||||
| 5 | 6u4bA | 0.13 | 0.12 | 4.08 | 1.50 | EigenThreader | GEYLHIRDYQAAIAIVEKLYSTAIKTFNDASDGY--------YTNMSMNNYNAQEKRVIGHIAERLFNIYIIKLQQDGELKNETFNGALNPVFDSAVPVVISFD-DNYAISGGALINSIIRHKNKNYDIVVLENVSYLNKTRLVNLTSAHPNVSLRFFDVNAFTEIVHTRAHFSASTYARLFIPQLF----RRYDKVVFIDSDTVVKADLGELLDV--PLGNNLVAAVKDIVMEGFVKFLQKTLNMNNPDEYFQ-AGIIVFNVKQMVEENTFAELMRVLKAK-----KYWFLDQDIMNKVFYSR---VTFLPLEWNVYHLKFATYMKFLAARKKPKMIHYAGNKPWNTEKVDFYDDFIENIA-------------------NTPWEMEIYKRQMS-- | |||||||||||||
| 6 | 6u4bA2 | 0.14 | 0.10 | 3.35 | 1.05 | CEthreader | -------------------------------------------------------------------------------------FNGALNPVFDSAVPVVISFDDNYAISGGALINSIIRHADKNYDIVVLENKVSYLNKTRLVNLTSAHNVSLRFFDVNAFTEI---VHTRAHFSASTYARLFIPQLFRR-YDKVVFIDSDTVVKADLGELLDVPLG---NNLVAAVKDIVMEPAGEYLQKTLNMNNPDEYFQAGIIVFNVKQMVEENTFAELMRVLKAK-----KYWFLDQDIMNKVFYS---RVTFLPLEWNVYHGNGNTYMKFLAARKKPKMIHYAGENKPWNTEK--VDFYDDFIENIANTPWEMEIYKRQMS------------------ | |||||||||||||
| 7 | 6u4bA | 0.12 | 0.11 | 3.84 | 1.00 | CEthreader | NDASDGYYTNMFVMRKDIFVDYSEWLFSILDNLEDAISMNNYNAQEKRVIGHIAERLFNIYIIKLQQDGELKVKELQRTFVSNETFNGALNPVFDSAVPVVISFDDNYAISGGALINSIIRHADKNYDIVVLENKVSYLNKTRLVNLTSAHNVSLRFFDVNAFTEI---VHTRAHFSASTYARLFIPQLFR-RYDKVVFIDSDTVVKADLGELLDV--PLGNNLVAAVKSDDGVMPAGEYLQKTLNMNNPDEYFQAGIIVFNVKQMVEENTFAELMRVLKAK-----KYWFLDQDIMNKVFYSR---VTFLPLEWNVYHGNGNTYMKFLAARKKPKMIHYAGENKPWNTEK--VDFYDDFIENIANTPWEMEIYKRQMS------------------ | |||||||||||||
| 8 | 5mu1A2 | 0.13 | 0.09 | 3.21 | 1.22 | MUSTER | ---------------------------------------------------------------------------------------SVSKTEHAEINIFSVASGHLYERMLNIMMASVMHHTNHTVKFWFIEQFLSPSFKDFIPHMAAEYGFKYEMVTYKWPHWL--RQQKEKQREIWGYKILFLDVLFPLSLDKVIFVDADQIVRTDMYDLVEHPL---DGAPYGFAPMCDSRVEMEGYRFWKTYLKGKPYHISALYVVDLQRFRELAAGDRLRQQYHALSADPNSLANLDQDLPNHMQFTIP--IATLPQEWLWCETWCS-----DETLKDARTIDLCNNPEPKL--DRARRQVPEWTKYDEEIAELARRVREE-------------------- | |||||||||||||
| 9 | 6u4bA | 0.15 | 0.12 | 4.01 | 1.31 | SPARKS-K | NYNAQEKRVIGHIAERLFNIYIIKLQQDGELKV---------------------------------------KELQRTFVSNETFNGALNPVFDSAV-PVVISFDDNYAISGGALINSIIRHANKNYDIVVLENKVSYLNKTRLVNLTSHPNVSLRFFDVNAFTEI-VHTRAH--FSASTYARLFIPQLFR-RYDKVVFIDSDTVVKADLGELLDV--PL-GNNLVAAVKDIVMEGFGEYLQKTLNMNNPDEYFQAGIIVFNVKQMVEENTFAELMRVLKAK-----KYWFLDQDIMNKVFYSR---VTFLPLEWNVYHGNGATYMKFLAARKKPKMIHYAGENKPWNTEKVD--FYDDFIENIANTPWE----------------MEIYKRQMS-- | |||||||||||||
| 10 | 5mu1A2 | 0.14 | 0.09 | 3.21 | 2.26 | FFAS-3D | -------------------------------------------------------------------------------------------TEHAEINIFSVASGHLYERMLNIMMASVMHHTNHTVKFWFIEQFLSPSFKDFIPHMAAEYGFKYEMVTYK--WPHWLRQQKEKQREIWGYKILFLDVLFPLSLDKVIFVDADQIVRTDMYDLVEHPLDGAPYGFAPMCDSRVEMEGYRFWKTGANYLKGKPYHISALYVVDLQRFRELAAGDRLRQQYHALSADPNSLANLDQDLPNHMQFTIP--IATLPQEWLWCETWCS-----DETLKDARTIDLCMTKEPKLD--RARRQVPEWTKYDE-------------------EIAELARRVRE-- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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| References: | |
| 1. | Wei Zheng, Qiqige Wuyun, Yang Li, Quancheng Liu, Xiaogen Zhou, Yiheng Zhu, P. Lydia Freddolino, Yang Zhang. Integrating deep learning potentials with I-TASSER for single- and multi-domain protein structure prediction. Submitted. 2023. |