| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
| | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSHHHHHHHHHHHHHHHHHHHSSSSSCCCCCCCSHHHHHHCCCCCSSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC MSNDGRSRNRDRRYDEVPSDLPYQDTTIRTHPTLHDSERAVSADPLPPPPLPLQPPFGPDFYSSDTEEPAIAPDLKPVRRFVPDSWKNFFRGKKKDPEWDKPVSDIRYISDGVECSPPASPARPNHRSPLNSCKDPYGGSEGTFSSRKEADAVFPRDPYGSLDRHTQTVRTYSEKVEEYNLRYSYMKSWAGLLRILGVVELLLGAGVFACVTAYIHKDSEWYNLFGYSQPYGMGGVGGLGSMYGGYYYTGPKTPFVLVVAGLAWITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVALFILYMAAAIVYVNDTNRGGLCYYPLFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISALVCLKLWRHEAARRHREYMEQQEINEPSLSSKRKMCEMATSGDRQRDSEVNFKELRTAKMKPELLSGHIPPGHIPKPIV |
| 1 | 5b2gA2 | 0.11 | 0.04 | 1.56 | 0.49 | CEthreader | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLQVMGIALAVLGWLAVMLCCALPMWRVTAFIGSNIVTSQTIWEGLWMNCVVQSTGQMQCKVYDSLLALPQDLQAARALVIISIIVAALGVLLSVVGDESAKAKTMIVAGVVFLLAGLMVIVPVSWTAHNIIQDFY---------NPLVASGQKREMGASLYVGWAASGLLLLGGGLLCCS------------------------------------------------------------------------- |
| 2 | 4o9uB | 0.06 | 0.04 | 1.75 | 0.68 | EigenThreader | | --------------------------------------------------------------------------------------------------------MDLIQAAYFVVA--------ILFIVGLKRMAHPTTAKSGIVWAGWGMVLAVLATFFWPGMGNFALILLALLLGSVVAWWAAVRTD------------MPQMVAIYNGMGGGA----AATIAAVELLKGAFENTGLMALAILGGLIGSVAFTGSLIAFAKLQGALVLALTVVIGLSLLWNDATASIVLFFLLALLFGVLMPVAISFYNAFTGMAVGFEGFAVGNPALMVAGTLVGAAGTLLTVLMARAMSVLDAAVMLAKELADLLEARMNVLLAEAGVDYLEEIANDVVNPAARRPGSPLYGMPILD---VDKAKNVIVIKRGQGNELFYAENT |
| 3 | 6wvdA2 | 0.17 | 0.06 | 2.02 | 0.66 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHRERVAMHYQMSVTLKY---EIKKLIYVHLVIWLLLVAKMSVGH---LRLLSHDQVAMPYQW---------------------------EYPYLLSILPSLLGL-----LSFPRNNISYLVLSMISMGLFIAPLIYGSMEAQQLYRHGKAYRFLFGFS------------AVSIMYLVLVLAVQVHAWQLLLDSWFTSTQEKKHK-------------------------------------------------------------- |
| 4 | 3kz4B1 | 0.10 | 0.09 | 3.26 | 0.81 | SPARKS-K | | -----------------------------QLLEVLKTKEEHQKEIQYEILQKTIPTFEPKLEDIKPEQAVEPLNNDIIFNYIPE-------RIRNDVNYILNMD--RNLPSTARYIRPN--LLQDRLNLHDNFEPDLKELVSTEAQIQKMSQDLLEALTIQSETQFLTGINSQAANDCFKTLIAAMLSYMSLISGMWLLTVVPNDMLVACQLAIVNTII--YPAFGMQRMH--------------YRNGDPQTPFQIAVANWLHFVQLMEALMQLSRQYKRSIQRGILSNRLGQLVDLTRLLAYNYETLMACVTMN------MQHVQTLTTE---KLQLTSVTSLCMLIPQTLFHYYNVNVNFHSNYNERINDAVAIITAANRLNLYQKKMKAIVEDFKRLHIFDVARVPRDRLRLLPTVYSDLLAFVSADTVEPINA |
| 5 | 3rkoC | 0.08 | 0.03 | 1.26 | 1.09 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------LIAILALVFVHYWTFNYEELLNTPMVEYLLMLGFFIAFAVKMPVVLHGWLPDAHSQA-----------------------PTAGSVDLAGILLKTAAYGLLRFSLPLFPNAS----AEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIH------------------------------------------------------------------- |
| 6 | 2cseW | 0.06 | 0.04 | 1.68 | 0.67 | DEthreader | | -TEPGTSYQCHSAVLFSPL-D-------A----A-HGLHGN--EIQRHIVSADV----------------------ADTPR----------S---VVHTRWASNV--D-----FDRDSSVILF-FRANVLHMLLEFVL-----------------DALTVSIRGRWMARLRMYRISAERQSQIRII-AGWLYNGTTALPLTCAPVKAFMTLANMMVGFE---------------------------------IDAPILRQWAEIIHRY-WPN-PSQIRYNFTPPEVLLLPIDHQPFTNELTNWRARVCELMKNLVDNQRYQPGW--T----QS-LVSSMRGTLDKLKLIKSMTPMYLQQLAPVELAVIAPMLPYTEVFS--------------------------------RYAYET-PPIT-AVVMG---------- |
| 7 | 5mqfB | 0.07 | 0.06 | 2.61 | 0.89 | MapAlign | | VLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVD--------------------CLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTRLIKHAVQPPTDAYYKLRHIVDEVNLGSFAKIYADTYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILQVVGDVDTSLPRTLDELPSPKVGAKPKIEGVDSDLGEAMSDCVNPSELPKMLDGLRKVNKSYPSLTT--KVEESGEHVILGTYLDCVMHDLKMYSKDSIVQGFQWGTPTARRVVYSAFLMADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFH- |
| 8 | 4n6hA | 0.11 | 0.09 | 3.27 | 0.51 | MUSTER | | -------------------------------------------------------------------------DLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPP--KLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTLATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRAPIHIFVIVWTLVDIDRRDPLVVAALHLC-------IALGYANS-----PVL |
| 9 | 2mmuA | 0.22 | 0.02 | 0.50 | 0.65 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SVLFIGLMLIGLIWLMVFMITGLLLTMRWHLE------------------------------------------------------------------------------------------------------------------------------------------------------------ |
| 10 | 6akfA | 0.09 | 0.04 | 1.46 | 0.44 | CEthreader | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SMSMGLEITGTSLAVLGWLCTIVCCALPMWRVSAFIGSSIITAQITWMNCVVQSTGQMQCKMYDSLLALPQDLQAARALIVVSILLAAFGLLVALVGAQATNAVQDETAKAKITIVAGVLFLLAALLTLVAVSWSANTIIRDFYNPLVPEAQKREMG--AGLYVGWAAAALQLLGGALLAAS------------------------------------------------------------------------- |
| (a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
| (b) | ID2 is the number of template residues identical to query divided by query sequence length. |
| (c) | Cov is equal the number of aligned template residues divided by query sequence length. |
| (d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
| (e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
| (f) | Template residues identical to query sequence are highlighted in color. |
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