| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
| | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCHHHHHHHHHHHSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCC MMNSDQKAVKFLANFYINGGKHWTHGHLRQTQPEPTQPKASVLLLGPEPGMAWDETQPPKMKEIPVGLRLQTGTPQESLPTYTQTLRELLLEQRPLITADLEVPSPTRYQVPSPSVRESSPHPHYSIGCKHQGREGGGRRAWQTLWFQSESPFTQKADFDQEQKWPSPAHYQLLSRPAFPAFSFRGCHSASKTPEGHTHLGLPGARGLGLRVQPQSLLQASLQAPGKRCPGPNTYNILPGSRLQSPRSPAFSMSRSPAFTSWLSTSFSFGSPNPWPSRLPRGGLQLTLPFGAWRGHPGCTQTQAPRHRPLLHALEPAGHNLLGPATEWNHGLPRGFPRPPLGLGAPAWPSDPLGTPMHPSGWPTLLWAVDKAGPAWIPHLPISPLH |
| 1 | 1y4wA | 0.07 | 0.07 | 2.89 | 0.56 | CEthreader | | NPGGIEWGNISWGHAISEDLTHWEEKPVRGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQKWVVVTSIAELHKLAIYTSDNLKDWKLVSEFGPYNDSGNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWGPDFYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMALSEGSTNTTTTGETFKVDLSFSAKSKASTFAIALRATLVGYDFAKQQIFLDRTHSGDVSFDETFASVYHGPLTPDSTGVVKLSIFVDRSSVEVFGGQGETTLTAQIFPSSDAV |
| 2 | 6vbu4 | 0.06 | 0.06 | 2.44 | 0.65 | EigenThreader | | EYAIYVQALIFRLE--------------------GNIQESL----RLFQMCAFLSPQCADNLKQVARSLFLL----GKHKAAIEVYNEAAKLNQKDWEICHNLGVCYIYLKQFDKAQDQLHNALHLNRHDLTYIMLGKIFLLKGDLDKAIEIYKKAVEFSPENTELLTTLGLLYLQLGIYQKAFEHLGNTLTYDPTNYKAILAAGSMMQTHGDFDVALTKYKVVACAVIESPPLWNNIGMCFFGKKKYVAA--ISCLKRANYLAPLDWKILYNLGLVHLTMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLEDSENAKRAYEEAVRLDKCNPLVNLNYAVLLYNQGEKRDALAQYQEMEK--------KVSSSLEFDPEMVE |
| 3 | 6giyA | 0.11 | 0.10 | 3.66 | 0.50 | FFAS-3D | | TLRYFDAEMRYLRE--------------AGKAFAQAHPDRA-----AMLDLDKAGTPDPCVERLFEGFAFSMGRLRQKIDDDLPELTESLVSMLWPHYLR---TIPSALTPRLSVMKMAETVPAGLEVTSRPVGPGNTVCRYRTTRAIPLNPLAEKVVMTTEPDGRSLADWSQVDLHRLSLYLAAEALYLRLPGNDERIRIDGWFSPGGFAEEDRLWPKGDSAFSGYQL--LLEYFTFRE-KFMFVHLNGLENVSLPAGISGFDLEVVLSQPWPADLPVTDDALCLVINLFTLEADPLIINGLESEYLLRPKRLQDGYTEIYSVDAVTGSGRTGSAEYVPFTSDAPERYYHTRVKRGVTGMYDTWLILGGQRWEGTNGQLPRRALQ |
| 4 | 4btgA3 | 0.11 | 0.10 | 3.66 | 1.01 | SPARKS-K | | GFNLKVKDLNGLTQAFAIG---ELKNQLSVGALQLPLQFTRTFSASMTSELLWEAY----VYRV--GRTATYPFDANAVVSSVLTILGRLWSPSTP----KELDPSARLRNTNGIDQLRSNLALFRAEVIFSDEELSSTIIPWFIEAMSESPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDAKEITAFTPVKLANNSNQRFLDVEPGISDRMSATLAPIGNTRGTVNSNGAEMTLGFPSVVERDYALDRDPMVAIAALRTGIVDESLEARASNDLKRFNYYAAVMHYAVAHNPEVGVAAEQGSLYLVWNVRTELRIPVGYNAIEGGSIRTPEPLEAIAYNKPIQPSEVLQAKVLD------LANHTTSIHIWP--------- |
| 5 | 4o5aA | 0.13 | 0.03 | 0.90 | 0.27 | CNFpred | | ----DAAASGTMIRHLAL------------------FGHKNIARVAGPEELGHSYIRDAAFSEITLGMRYRMLHTDYTPESGAEATKRLLSVERPTAIIY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 6 | 6yejA | 0.05 | 0.04 | 1.78 | 0.67 | DEthreader | | -----------------DSHLVRP-N----------CTVRCVMLCSSSYSELGLQLIIDVLTLRNLFVS-L-----NLHRGYGLLKLQERLLYKCDQ-------Y-GYNLLSTVMENNLSRIAWHCGVPPLC-----TVGMAT-----------MILTLLSS------PLDLSAHQDALILAGNAFLLICALHYLDLQNS-T-EKFGGFLRSLDMMATVCVQLRLFEPLVIKALLLLAQLVLVCLLQVFIVFLVLLSYELLELYSRWILLISEVRSLLSLFQFEMYLTLRVHPSED---EILAQYLVPATCKAAAVLGMD-A-VAEPVSRLLES------------GVLYVL-ECDLLDD----------QHLVAT---------- |
| 7 | 2agsA | 0.07 | 0.06 | 2.74 | 0.92 | MapAlign | | ---LFKRKNSTVPFEESNGTIRERVVHSFRIPTIVNVDGVMVAIADARYETSFDNSFIETAVKYSVMDATVIVKGNKLYILVGSFNKTWTQHRDGSDWEPLLVVGEVTKSAANGKTTATISWGKPVSLKVQIADMGGRVFTKIMYSEDDGNTWKFAEGRSKFGCSEPAVLEWEGKLIINNRPLNLKGRWMRDRLHLWMTDNQRIFDVGQISIGDENSGYSSVLYKDDKLYSLHEINTNDVYSLVFVRLIGELQLMKSVVRTWKGLVGFLSHSANGSVWEDVYRCVDANVANAERVPNGLKFNGVGGGAVWPVARQGQTRRYQFANYRFTLVATVTIDELPKGTSPLLGAGLLLGLSYDKNRQWRRQGSVYVDGQPLSGNTVVRG-- |
| 8 | 2nbiA | 0.15 | 0.14 | 4.82 | 0.78 | MUSTER | | VLPTPQN----INCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDVLPFPNNLGCPACCPFESPDNPMFTPSPSPPNCSPTMLPTPQPSTPTV-----ITSPAPSSQPSQCAEVEQCPIDECFLPYGDSSRPLDCTDPAVNRPPTPQNINCPACCPMFTPSPDGSPPPTMMPSPEPSSQPSDCGEVIEECPIPKSDSARPPDCTAVGRPDCNV-LPFPNNIGCPNPMFTPSPDGSPPNCSPTMLPSPSPTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCPYDTCPFDDSSRPPDCTDPSVNRPDCDKLSTAIDFTCPTCCPTQPDNPMF |
| 9 | 2pffB | 0.17 | 0.16 | 5.34 | 0.99 | HHsearch | | HGSLVPTASFFIASQLQEQ-------------FNKILPEPTEFAADDEPTTPASLVEPSKVGQFDQVLNLCLTEFENCYLKTKELIKNY-------ITARIMAKRPFDKKSNSALFRAGNAQLVAIFGGQGNTDSAETLSELIRTTLDAEKVFTQGLNILEWLENPSDKDYLLSIPISCPLIGVIQLAHYVVTAKLLFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESVRCYEAYPNTSLEGVPSPMLSISNLTQEQDYVNKTVEISLVNGA-KNLVVSGPNLTLR--KAKAPSGLDQSRIPFSERFLPVASPFHSHLLVPLVKNNVSFN--AKDIQIPVYDTFDGSD-LRVLSLPVKWETTTQFKATHILDFGPGGASGLTH |
| 10 | 5c86A | 0.06 | 0.06 | 2.61 | 0.52 | CEthreader | | GPMVKFPVVPVAVALVPETGNLLVWSSGWPNRWTTAGNGKTYTSLYNVNTGNISDAIVQNTQHDMFCPGTSLDADGRIIVTGGSSAAKTSVLDFKKGESSPWTPLSNMQISRGVIGGSFSGAGTRNGEVYDPKANTWTKLAGCPVKPLVMQRGMFPDSHAWLWSWKNGSVLQAGPSKKMNWYDTKGTGSNTPAGLRGTDEDSMCGVSVMYDAVAGKIFTYGGGKGYTGYDSTSNLTLGEPGQAVQVQKLANGKYNRGFANAVVMPDGKIWVVGGMQKMWLFSDTTPQLTPELFDPATGSFTPTTPHTVPRNYHSTALLMALFEADGVTPAKRPVIQSLSDTAVRAGAPITITMQDAGAYTFSMIRVSATTHTVNTDQRRIPLDGQD |
| (a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
| (b) | ID2 is the number of template residues identical to query divided by query sequence length. |
| (c) | Cov is equal the number of aligned template residues divided by query sequence length. |
| (d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
| (e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
| (f) | Template residues identical to query sequence are highlighted in color. |
|