| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
| | | | | | | | | | | | | | | | | | | |
| SS Seq | CCHHHHHHCCCCCCCCCCCCCCCSSSCCCCSSSSSCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCSSSCCCCSSSSCHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSCSCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCSSSSCCCHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC MARLVAVCRDGEEEFPFERRQIPLYIDDTLTMVMEFPDNVLNLDGHQNNGAQLKQFIQRHGMLKQQDLSIAMVVTSREVLSALSQLVPCVGCRRSVERLFSQLVESGNPALEPLTVGPKGVLSVTRSCMTDAKKLYTLFYVHGSKLNDMIDAIPKSKKNKRCQLHSLDTHKPKPLGGCWMDVWELMSQECRDEVVLIDSSCLLETLETYLRKHRFCTDCKNKVLRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHIHVCCETDFIAHLLGRAEPEFAGGRRERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAEEQTWQMLFYLGVDALRKSFEMTVEKVQGISRLEQLCEEFSEEERVRELKQEKKRQKRKNRRKNKCVCDI |
| 1 | 3dlaD | 0.08 | 0.08 | 3.22 | 0.64 | CEthreader | | VVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAALAGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYQTMIWENGALLAESERFPKGVRRTELLRSERLRMGTFDDNRRHHRELTESFRRIDFALDPPAGDIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRTHALIVATHAMDREGRPRSDILAFALPGFNNAIKLARALGVTFSEIDIGDTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGLSELALGWSTYKTLIQHLIRWVISAGEFGEKVGEVLQSVLDTEEAKVGPFALQDFSLFQVLRYGFRPSKIAFLAWHAWND |
| 2 | 4xdnA | 0.05 | 0.05 | 2.16 | 0.68 | EigenThreader | | ELVQYMVNLQDELYQNWASVFQY-------------VGVMLCIKLKQHRRVKTSFHGLLSQCREK---SQWKWFLNLCYVNYLLNERFPIMVIQLCKFFDTNKQSLVTNEGKGCVIKR--IALKVE-----LPMIFHYKELKNILLLLQSVSYIVNCYDEKGNFSRKFLPKVYSTTQKLIKNLDSRIQTYKSILE----FCEFYKVWEQTLLKGAVV--------LVRLLQAMKVQFEGGGAVEEYTRLAQSGGTSSEVKMISLLNCYTVQAARVSRCSGDKQGELVEQCNKVWLQVEKLLQIWECTVTILWLFSHFKQRAEYVSKLREFYSSNKLLQILVNYLGGRMLGEIYAISAKCFDMCRQQKVQYVIGIWHLMNCTVAMRGKDV |
| 3 | 5uot02 | 0.10 | 0.07 | 2.54 | 0.92 | FFAS-3D | | -----------------------------------------------------------------------IPSQEADKMFFLIEKI------KMFNQDIEKLVEGEEVVRE---NETRLYNKIREDFKNWVGILATNTQKVKNIIHEEVEKYEKQYRGKELL--------GFVNYKTFEIILVEPALSMLQKAMEIIQQAFINVAKKHFGEF---FNLNQTVQSTIEDIK---------------------------------VKHTAKAENMIQLQFRMEQMVFCQDQIYSVVLKKVREEFTEIGIHLNAYFLETSKRNQIPFIIQYFMLRENGDSLQKAMQILQEKNRYSWLLQEQSETATKRRILKERIYRLTQARHA------- |
| 4 | 5ctqA | 0.09 | 0.09 | 3.40 | 0.60 | SPARKS-K | | LIRLLRLEGELTKVRMARQKMSEIFPLTEELWLEWLHDEISMAQDGLDREHVYDLFEKAVKDYIPNIWLEYGQYKVRSVFERALSSVG-LHMLEKVHSLFRRQLAIPLYDMEATWSEDPI----PESVIQNYNKALQQLEKYKPYEEALLQAEAPRGDPARIQLIFERALVENCVPDLWIRYSQYLDRSVHNRAIRNWTVALWSRYLLAMERHGVHQVISVTFEKALNAGFIQATDYVEQAYLDYLRRRVDFKQDS-----SKELEELRAAFTRALEYLKNESGDPSCVNMQKARELWDSIMTANMWLEYYNLERAHGDTQHCRKALHRAVQCHVCEVLLTMERTEIAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQRKRARA |
| 5 | 4hayC | 0.07 | 0.05 | 2.09 | 0.82 | CNFpred | | -------------------------------------------------NMAWDTIVEQSTALDSETVKIIAN--IIKTNVAVCTSM-GADFYPQLGHIYYNMLQLYRAVSSMISAQVEGLIATK---TPKVRGLRTIKKEILKLVETYISKA---RNLDDVVKV------------LVEPLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKV--GHMIPQGVILILQSVFEC--------TLDMINKDFTE----YPEHRVEFYKLLKVINEKSFAAFLE-----PPAAFKLFVDAICWAFGLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSKSGFSKQALLLMKLIS---------------------------- |
| 6 | 7cpxA | 0.06 | 0.04 | 1.82 | 0.67 | DEthreader | | ESMDPQRL---------VMTHDYESTLESIPSVVADACSSSLVVHLAVQA-A------NQD-GRTT-NHSAQEALIKATYAQAGL--------EDRCQFFEAH----DPQEAEAIATFGHEL----------HTEGTAGLAGLMKASFAVRHGVQ---P-----EY-E-----------A--K-------SQRSLKIMMEEMLQFLQSHPEIHLH---DLTWSLLRR-RRAIVSGIKVIKVDLAYT-------------WERFG--AS-FD--AD----------EFMRAVAPD-PCM-SVSKLLPAYPW-DRS--RY-WV-----RHHLRGPKPHLLLGGVMLLHPASLDVAFQTVIGAYSINDLRSLGRWMVAILVGIFLHEKFSDS |
| 7 | 7jpkA | 0.05 | 0.05 | 2.32 | 1.05 | MapAlign | | KMHKTCYYIGTDIVATKPSPCARPCTINGSECRGGWPGPNHGI-THFDNFGFSMLTVYQCITMGWTDVLYLQDIANRVLLSLFTIEMFDCFVVCSGILELLLGMQLFGGRYDFSNFDNFPQASNGIMAYPGVLVCIYFIILFVCGNYILLNVNLAEAESLTSAVNATWFTNFILLFILLSSAALAYFDIAFTSVFTVEINILDLLVVAVSLILVTTLLQFMFACIGVQLKGKFFSCNDLSKMTEEECYYYVYKDGDPQMELRDNVLSAMMSLFTVSTFEGWPQLLYRAIDSVEMAIFFIIYIILFMMNIFVGFVIVTFQEQSSYFEYLMFALIMLNTICLAFTIIFTLEMILKLLAFRGYFGPWNVFDFLIVIGSIIDVILSEIDTFLS |
| 8 | 5ifeC | 0.11 | 0.10 | 3.74 | 0.59 | MUSTER | | MLILIREFQSPDEEM----KKIVLKV---VKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDVGAAEIISRIVDDLK-EQYRKMVMETIEKIMGNLGAADIDHKLEEQ-LIDGILYAFQELNGFGTVVNALGKRVKPYLPQINKSAKVRQQAADLIVVMKTCQEEKLMGHLGVVLYPEVLGSILGAPIKDLLPRLTPILKNRH--EKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAI---RRATVNTFGYIAKAIGPHDVLATLQNRVCTTVAIAIVAETCPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDY--IYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCED |
| 9 | 1vt4I | 0.18 | 0.16 | 5.37 | 0.90 | HHsearch | | YKDILSVFEDAFKDVQDMPKSILSK-E-------EIDHI--IMSKDAV-SGTLRLF---WTLLSKQEEEEVLRINYKFLMSPIEQRQPSMMTRMYIERLYNDNQVYNQALLRPKNVLIDGIFWLNLKNCNSPEMLQKLLYQISSNIKLRIHSILKSKPYENCLLVLLNVQNAKALVTDFLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPPPYLDQYFYSHIGHHLKLFRMEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYER-----LVNAILDFLPKIEENICSKYTDLLRIALMAEDEAIFEEA---HKQVQR------GGGGGGGGG |
| 10 | 5u1sA | 0.09 | 0.09 | 3.48 | 0.62 | CEthreader | | KHLTTNLSKITKLYINKWLQKSDEKAERISSFEMDFVKMLLCYLNFNNFDKLSIELSLCIKSK-EKYYSSIVPYADNYLLEAYLSLYMIDDALMMKNQLQKTMNLSTAKIEQALLH-----ASSLINVHLWDSDLTAFQIYFGKTLPAMKPELFDINNDHNLPMSLYIKVILLNIKIFNESAKLNIKAGNVISAVIDCRKAQNLALSLLKKKNKLSQGSRLALLKSLSFSFFQLIKIHIRIGSARDCEFYSKELSRIISDLEEPIIVYRCLHFLHRYYMITEQTCLQNITLGKANKAFDYLDAEADITSLTMFLYDNKEFVKLEQSLVLYFGDQLEKTFLPNLWKLHLGKDIDDSICLSEYMPKNVINRVHNMWQKVMSQLEEDPFFKG |
| (a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
| (b) | ID2 is the number of template residues identical to query divided by query sequence length. |
| (c) | Cov is equal the number of aligned template residues divided by query sequence length. |
| (d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
| (e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
| (f) | Template residues identical to query sequence are highlighted in color. |
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