| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
| | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCSSSSCCCCCCSSSSSSCCCCCSSSSSCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCSSSSCCCCCCCCSSSCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCSSSSSCCCCCCCCCCCCSSCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCSSSSSCCCCCCCCSSSSSCCCCCCCCSSSSSCCCCCCCCCCCSSSSSSSCCCCSSSSSSSCCCCSCCCCCCCSSSSCCCCCSSSSSSSCCCCCSSSSSCCCCCCCSSSSSCCCCC MAPSADPGMSRMLPFLLLLWFLPITEGSQRAEPMFTAVTNSVLPPDYDSNPTQLNYGVAVTDVDHDGDFEIVVAGYNGPNLVLKYDRAQKRLVNIAVDERSSPYYALRDRQGNAIGVTACDIDGDGREEIYFLNTNNAFSGVATYTDKLFKFRNNRWEDILSDEVNVARGVASLFAGRSVACVDRKGSGRYSIYIANYAYGNVGPDALIEMDPEASDLSRGILALRDVAAEAGVSKYTGGPGDALEPEGRGTGGVVTDFDGDGMLDLILSHGESMAQPLSVFRGNQGFNNNWLRVVPRTRFGAFARGAKVVLYTKKSGAHLRIIDGGSGYLCEMEPVAHFGLGKDEASSVEVTWPDGKMVSRNVASGEMNSVLEILYPRD |
| 1 | 3vi3A | 0.14 | 0.11 | 3.75 | 1.00 | DEthreader | | ---PGT--AHGSSILACAPLYS-------------TCYLRILEYAPCRSSGYCQGFSAEFTK----T-GRVVLGGPGSQILSATQEQ-IAESYY-----LVQGQLQTRQADSYLYSVAVGEFSGDDTEDFVAGVPKG---NLTYGYVTILNGS--DIRSLYN---F----SGEQSFGYAVAATDVNGDGLDDLLVGAPLLMEVGRVYVYLQHPAG-------IEPTPTL-----T-LTG--HD--E-FGRFSSLTPLGLDQDGYNDVAIGAPFGQQGVVFVFPGGPG-----SQVLQPLWAADFGALRGDLDGN----GYPDLIVGSFG---KAVVYRGRPIGKHVAPVDS---------HGLR--PALHYQ-------- |
| 2 | 2bwrA | 0.12 | 0.11 | 3.74 | 1.51 | SPARKS-K | | SQALPVPTRIPGVADLVGFGNGGVYIIRNSLLIQVVKVINNFGYDAGGWRVEK--HVRLLADTTGDNQSDVVGFGENG-VWISTN-NGNNTFVDPPKMVLANFAYAAGGWRVEKHIRFMADLRKTGRADIVGFGDGG---------IYISRNGGGQFAPAALNNFGYAQGW--RLDRHLRFLADVTGDGLLDVVGFG-----ENQVYIARN--------SGNGTFQPAQ---AVVNNFCIGAGGWTISA--HPRVVADLTGDRKADILGFG----VAGVYTSLNNG--NGTFGAVNLVLKDRVEKHVRCVSSLTNKKVGDIIGFGDAGVYVALNKHPRFVVLTGDGCADIVGFGENSGPIMKLIDDMTVSTVRYAANLYL |
| 3 | 3v4pA | 0.11 | 0.10 | 3.49 | 1.00 | MapAlign | | ------AGISSFYTKDLIVMGAPGSSYWTGSLFVYNITYKAFLDKQNQVKFGSYLYSVGAGHFRSQHTTEVVGGAPQGKAYIFSIDE--KELNILHE---------MKGGSYFGASVCAVDLNADGFSDLLVGAPMQS-TIREEGRVFVYINSGAVMNAMTNL----VGSDKYAARGESIVNLDIDNDGFEDVAIGAPEDDLQGAIYIYNGRA--------DG-ISFSQ----R---IEGLQISKSLSMFGQSISGIDADNNGYVDVAVGAFRS--DSAVLLRTRPVWPSVCIDLTLCFSPGYIVLFYNMSLDVNSPPRFVITGSIQVSSREANCRTHQAFMRKDTPIQIEAAYGEKDIMKKTINFA------------- |
| 4 | 3v4pA | 0.08 | 0.08 | 2.97 | 0.62 | CEthreader | | CGHRWKNIFYIKNENKLPTGGCYGVPPDLRTELSKRIAPCYQDYVKKFGENFASCQAGISSFYTKDLIVMGAPGSSYWTGSLFVYNITTNKYKAFL-----DKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQ----IGKAYIFSIDEKELNILHEMKGKK----LGSYFGASVCAVDLNADGFSDLLVGAPMQSEEGRVFVYINSGSGAVM---------------NAMETNLVGSDKYAARFGESIVNLDIDNDGFEDVAIGAPQEDDLQGAIYIYNGRADGSQRIEGLQISKSLSMFGQSISGQIDNGYVDVAVGAFR------SDSAVLLRTRPVVIVDASLSHPESVNRTKFDCVENGWPSVCIDLTLC |
| 5 | 2bwrA | 0.13 | 0.12 | 4.01 | 1.18 | MUSTER | | VISQALPV----VADLVGFGNGGVYIIRNSLLIQVVKVINNFGYDAGGWRVEKH--VRLLADTTGDNQSDVVGFGENG--VWISTNNGNNTFVDPPKMVLANFAYAAGGWRVEKHIRFMADLRKTGRADIVGFG---------DGGIYISRNGGGQFAPAQLALNNFGYAQGWRLDRHLRFLADVTGDGLLDVVGFGE-----NQVYIARN--------SGNGTFQPAQA---VVNNFCIGAGGWTISAHP--RVVADLTGDRKADILGFGVAG----VYTSLNNGNGTFGAVNLVLKDGWRVEKHVRCVSSLTNKKVGDIIGFGDAG-------VYVALNNGNGTFGPVKRVIDNGYNQGWRVDKHPRNSVWACMNKGD |
| 6 | 2bwrA | 0.10 | 0.09 | 3.22 | 1.95 | HHsearch | | VISPVPTRIPGV-ADLVGFGNGGVYIIRNSLLIQVVKVINNFGY--DAGGWRVEKHVRLLADTTGDNQSDVVGFGEN-GVWISTNNG-NNTFVDPKMVL--ANFAYAGGWRVEKHIRFMADLRKTGRADIVGFGDG---------GIYISRNGGGQFAPAQLALNNFGYAQGWRLDRHLRFLADVTGDGLLDVVGFGE-N----QVYIARNSG------NG--TFQPAQAVVNFCGGWKDFGVNSGWRVEKHVRCVSSLTNKKVGDIIGFG----DAGVYVALNNG--NGTFGPVKRVDNWRVDKHPRFVVDLTGDGCADIVGFGEN-------SVWACMNKGDGTGPIMKLIDDMTVSKGWT-----LQKTVRYAANLY |
| 7 | 2bwrA | 0.13 | 0.11 | 3.94 | 1.48 | FFAS-3D | | -ALPVPTRIPGVADLVGFGNGG-VYIIRNSLLIQVVKVINNFGYDA--GGWRVEKHVRLLADTTGDNQSDVVGFGENG--VWISTNNGNNTFVDPPKMVLANFAYAAGGWRVEKHIRFMADLRKTGRADIVGFGDGG-----------IYISRNNGGGQFAPAQLALNNFGGWRLDRHLRFLADVTGDGLLDVVGFG----------------------ENQVYIARNSGNGTFQPANNFCIGAGGWTISAHPRVVADLTGDRKADILGFGVAG--VYTSLNNGNGTFGAVNLVLKDNSGWRVEKHVRCVSSLTNKKVGDIIGFGDAGGWRVDKHPRFVVDLTGDGCADIVGFGENSVWACMNKGDGTFGPIMKLI---- |
| 8 | 4g1eA1 | 0.10 | 0.08 | 2.96 | 0.92 | EigenThreader | | ---------------------------FNLDVDSPYSG-----------PEGSYFGFAVDFFVPSASRMFLLVGAPVEGGQVLKCDWSSTRRCQP-IEFDATGNEFKSHQ-WFGASVRSKQ-----DKILACAPLYTEMKQEREPVGTCFLQDGTKTVEYAPCRSIDADGQGFCQGGFSIDFT-----KADRVLLGGPG-SFYWQGQLISDKYDPNVYSIKYNNQLAT----------RTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNM--SFTGAATDINGDDYADVFIGAPRGSDVGQVSVSLQRAS---GDFQTTKLNGFEVFARIAPLGDLDFNDIAIAAGGEDKKGIVYIFNGRS |
| 9 | 4up4A | 0.12 | 0.09 | 3.15 | 2.19 | CNFpred | | --------------DLVGFGNGGVYIIRNSLLIQVVKVINNFGYDAGGWRV--EKHVRLLADTTGDNQPDVVGFGE-NGVWISTNNG-NNTFVDPPKMVLANFAYAAGGWRVEKHIRFMADLRKTGRADIVGFGD---------GGIYISRNNQFAPAQLALNNFGYAQGWRL--DRHLRFLADVTGDGLLDVVGFGE-----NQVYIARNSGNGTFQ-PAQAVVNNFCIGAGGWTI------------SAHPRVVADLTGDRKADILGFGV----AGVYTSLNNG--NGTFGAVNLVLKDFG-KHVRCVSSLTNKKVGDIIGFGD---------AGVYVALN------------------------------------- |
| 10 | 3v4pA | 0.06 | 0.05 | 2.07 | 1.00 | DEthreader | | --SHGA-N-RW-LLVGAPTANW----------N-GAIYREQLQLGSPNGERDNQWLVTLSRQPGENGSIVTCGHRWKPTGGCYGVPPDLRTELSKR-------IAPCYFASCQAGISSFYT----KDLIVMGAPGSS-----YWTGSLFVYNITTN-KYKAFL--DKQ-NQVKFGSYLYSVGAGHFRSTTEVVGGAPQH--EQIGKAYIFSI--D--E---KELNILHE----MK--G---KK--L-GSYFGASVCAVLNADFSDLLVGAPMQSREEGRVFVYINSGS---MTNLVGSDKYAARFESIVLDIDND-G-FEDVAIGAPQ-----GAIYIYNGRAD--S-FSQRIEGLQILTRILQQKKEK----------- |
| (a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
| (b) | ID2 is the number of template residues identical to query divided by query sequence length. |
| (c) | Cov is equal the number of aligned template residues divided by query sequence length. |
| (d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
| (e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
| (f) | Template residues identical to query sequence are highlighted in color. |
|