| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
| | | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCSSSSSCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCSSSSSSCCCCCCCCSSSSSSSCCCSSSSSCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCSSSSSSCCCCCCCCSSSSSSSSCCSSSSSSSCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCSSSSSCCCCCCCCCCCCCCCCSSCCCCCHHHHHHHHHHHHHCCCCCCCSHHHHCCCCCCC QKPPKSNVNNNPGSITPTVELNGLAMKRGEPAIYRPLDPKPFPNYRANYNFRGMYNQRYHCPVPKIFYVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQNEPIPERSPQNGESGKDVDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPEYGQGMNPISRLAQIQQAKKEKEPDYVLLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTNLQDQLEKTGENKGWSGPKPGFPEPTNNTPKGILHLSPDVYQEMEASRHKVISGTTLGYLSPKDMNQPSSSFFSISPTSNSSATIARELLMNGTSSTAEAIGLKGSSPTPPCSPVQPSKQLEYLARIQGFQAALSALKQFSEQGLDPIDGAMNIEKGSLEKQAKHLREKADNNQAPPGSIAQDCKKSNSAV |
| 1 | 1qu6A | 0.20 | 0.07 | 2.28 | 1.88 | FFAS-3D | | ---SHMEMAGDLSAGFFMEELNTYRQKQGVVLKYQELPNS-------------------GPPHDRRFTFQVIIGREFPEGEGRSKKEAKNAAAKLAVEILNKEKKAVSPLLLTTTNSSEGL---SMGNYIGLINRIAQKKRLTVNYEQCAS-GVHGPEGFHYKCKMQKEYSIGTGSTKQEAKQLAAKLAYLQILSEETGS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 2 | 5n8lA | 0.32 | 0.10 | 3.07 | 1.17 | SPARKS-K | | -------------------------------------------------------------------------------------------------------------GGSLPSIEQMLAANPGK-TPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGPSKKAAKHKAAEVALKHLKG-------------------------------CNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAKMLLRVHT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 3 | 5n8lA | 0.32 | 0.10 | 3.07 | 1.42 | CNFpred | | --------------------------------------------------------------------------------------------------------------GGSLPSIEQMLAANPGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGPSKKAAKHKAAEVALKHLKG-------------------------------CNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAKMLLRVHT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4 | 1vt4I3 | 0.08 | 0.06 | 2.44 | 1.05 | MapAlign | | --GGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGG-GGG--GGGGG-------------GGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGG---GGGGGGGGGGGGG-GGGGGGGGGGGGGGG--GG--GG--------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------------------------------------------ |
| 5 | 2l3jA | 0.23 | 0.11 | 3.32 | 2.25 | HHsearch | | --------PGPVLPKNALMQLNEIKP----GLQYMLLSQTGPVHA-------------------PLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFVQFPNASEAHLAMGTSVNTDFTSDQADFPDT----------LFNGFETPDSEPPFYVGSNG----DDSFSSSGDVSLSA----------------SPV--------------PASLTQPPFPPPSGKNPVMILNEL-----RPGLKYDFLSESGESHAKSFVMSVVVDGQFFEGSGRNKKLAKARAAQSALATVFNLHLLEHHHHHH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 6 | 6sdwA | 0.75 | 0.26 | 7.50 | 1.88 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------------------------SHMKSEISQVFEIALKRNLPVNFEVARESGPPHMKNFVTKVSVGEFVGEGEGKSKKISKKNAAIAVLEELKKLPPLPAVERVKPRIKKKTKPIVKPSPEYGQGINPISRLAQIQQAKKEKEPEYTLLTERGLPRRREFVMQVKVGNHTAEGTGTNKKVAKRNAAENMLEILGFK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 7 | 2yt4A | 0.18 | 0.07 | 2.32 | 1.08 | SPARKS-K | | ------------------------------------------------------------------------------------------------------------GSHMSVQDKKEFVINPNGKSEVCILHEYMQRVKVRPVYNFFECENPSE--PFGASVTIDGTYGSGTASSKKLAKNKAARATLEILIPDFVKQSEELEYFNHISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMG-DTSIKFE----QKSEYVMACG--KHTVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
| 8 | 2yt4A | 0.16 | 0.06 | 1.90 | 1.23 | CNFpred | | ----KKEFVINPNGKSEVCILHEYMQRVLVRPVYNFFECE---------------------NPSEPFGASVTIDGVTYSGTASSKKLAKNKAARATLEILIPELEYFNHISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFE------QKSEYVMACGKHTVRGWCKNKRVGKQLASQKILQLLHPH------------------------------VKNWGSLLRMYGR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
| 9 | 2l3jA | 0.17 | 0.08 | 2.54 | 2.16 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------PGPVLPKNALMQLNEIKP----GLQYMLLSQTGPVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFVQFPNASEAHLAMG--RTLSV-----NTDFTSDQAD------------FPDTLFNGFETPDK-----------------------------------------SEPPFYVGSNGDDSSSGDVSLSA----------SPV----PASLTQPPLPI---------------PPP-------F-PPPSGKNPVMILNEL---RPGLKYDFLSESGESHAKFFEGGRNKK----LAK---ARAAQSALATVFNLHLLEHHHHHH-------------------------------------- |
| 10 | 5n8lA | 0.28 | 0.09 | 2.62 | 1.88 | FFAS-3D | | --PSIEQMLAANPGKTPISLLQEYGTRIGKTPVYDLLKAE-------------------GQAHQPNFTFRVTVGDTSCTGQGPSKKAAKHKAAEVALKHL------------------------KGCNPVGALQELVVQKGWRPEYTVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAKMLLRVHT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| (a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
| (b) | ID2 is the number of template residues identical to query divided by query sequence length. |
| (c) | Cov is equal the number of aligned template residues divided by query sequence length. |
| (d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
| (e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
| (f) | Template residues identical to query sequence are highlighted in color. |
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