| Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
| | | | | | | | | | | | | | | | | | | | |
| SS Seq | CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCC ALAESASCRLETKERELRVEAEHAERVLTLSREMLELKADYERRLQHLTSHEATPQGRLPQESPETKSEPGQGPEMQEVLLEVQRLRVENQQLSKDYARKAEELQATYERENEAIRQAMQALKQLSDLEREKLQRELQETTQQNHAMKAQLEASHQRALRMLEKARHQELKATEERLKKESSHSLQIQHQTHRLELQALFLEETQQAQRAREVETLRQEHRKEMQAMVADFSSAQAQLQARLAALEAELKDSGEKPGKGASRPEDLQLIGRLQTRLKEREDIIKQLTEERRFHYAAFPSAMSHRNRSFSFNPHPGYLTPSMKKKKVEDVPSRVVSVPNLASYAKNFLSGDLSSRINAPPITTSPSLDPSPSCGRTYKPNQSTDAKTATRTPDGETAQAKEVQQKQGSPHQEWFTKYFSF |
| 1 | 2tmaA | 0.13 | 0.08 | 2.90 | 1.41 | FFAS-3D | | --LDKENALDRAEQAEADKK-AAEDRSKQLEDELVSLQKKLKGTEDELD-------------------------KYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERL-ATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNN-LKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETR------AEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI---------------------------------------------------------------------------------------------------------------- |
| 2 | 6yvuA | 0.11 | 0.10 | 3.73 | 1.29 | SPARKS-K | | KKETKLQENRTLLTEEIEPKLEKLRNEKRMFLEFQSTQTDLEKTERIVVSYEYYNIKHKHTSIRETTRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKKLENKENGLLNEISRLKTSLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDLYKRKEELVSTYNAQLAKAKTELNEVSLAIKKSSMKMELLKKELLTIEPKLKEATKDNELNVKHVKQCQETCDKLRARLVEYGFDPSRIKDLKQREDKLKSHYYQTCKNSEYLKRRVT----NLEFNYTKPYPNFEASFVHGVVGQLFQIDNDIRYATFNVVVQDSQTATQLLERGRLRKRVTIIPLDKIY-----------TRPISSQVLDLAKKIAPGKVELAINLIR-FDESITKAMEFIFGN |
| 3 | 1vt4I | 0.05 | 0.05 | 2.22 | 1.08 | MapAlign | | PSMMTRMYIEQRDRLYLQPYLKLRQALLEVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIKLRIHSIQAELRRLLKKAWNAFQVTDFLSDEVKSLLLKYPRRLSIIAESIRDCDKLTTIIESSLNVLEPAEYRKMFDRIPTILLSLIWFDVIKSDVMVVVNKLHEYALHRSIVDHYNIPKTIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSASGSILNTLQQLKFYKPYICDYERLVNAILDFLPKGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
| 4 | 2pffB | 0.18 | 0.15 | 4.96 | 1.42 | HHsearch | | ------------------MDAY-STRPLTLSHG------SLEHVLLVLQEQNKILPEPTEDDEPTTPAELQFDQVLNLCLTEFENC--------YLEGNDIHALAAKLLQENDTT--------------LVKTKELIKNYITARIELRDLYQTYH-VLVGDLIKFSAETLSELIEWIPISCPLIGVIQLAHYVVTAKLLELRSYLKTGHSQGL--VTAVAIAETDSWESFFVS---VRKAI-TVLFFIGVRCYEAYPNT-SLPPSI-----LEDSLENNEGVPSPMLSISN---LTQEQVQDYVNKTNSHLPAGKQVEIS----LVNGAKNLVVSGPPQSLYGLTLRKAKAPSGLDQSRIPFSEKLKFSNRFLPVASPFHSHLLVPASKVKNNVSFNAK-DIQIPVRLPVKWETTTFKF |
| 5 | 1vt4I | 0.06 | 0.06 | 2.54 | 0.69 | CEthreader | | CDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIP-PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
| 6 | 4ui9O | 0.07 | 0.07 | 2.93 | 1.00 | EigenThreader | | VSLVERRRLNQQLLPLLQGIEESCANSVQIRIKLMAEGELKDMEQFFDDLSDSFSGTEPEVHKTSVVGLFLRHMILAYSKLVFKLYTALQQYFQSDENKKASLQKELNNLLKFNAHYLSYLNNLRVQFSSTHSLLHYFDRLSLRYAALNLAALHCRFQAELALQEAIRIAQESNVCLQHCLSWLYVLGLLEHSVKKAVHYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHSRLYTMALQQAQMLLSMNSLEQQNNTESFAVALCHLAELHAEQLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDKGRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDC |
| 7 | 7ko4P | 0.12 | 0.08 | 2.76 | 1.35 | FFAS-3D | | --KENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEA---------------------LKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKL-EEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSL-EAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEELYAQKLKYKAISEELDHALNDMT-------------------------------------------------------------------------------------------------------------------------------- |
| 8 | 6yvuB | 0.11 | 0.10 | 3.75 | 1.15 | SPARKS-K | | KEKQLTLLRSKLFQFKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLTKNISAEIIRHEKELLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAGDLGVIDDSFDVAISTACPRLDDTVECAQHCIDYLRKNKLGYAR----------FILLDRLRQFNLQPISTPENVPRLVKPKNFSNAFYSVLRDNNVAYGKKRFTVDGKLIDINHVAKGLMKLKVDDYTPEELSERENNFRVASDTVHEMEEELKKLRDHEPDL |
| 9 | 5xg2A | 0.14 | 0.08 | 2.68 | 0.87 | CNFpred | | --TKGAIVRWGKRKEKLIEEI----------------------------------------------------RAREEERNALVVRLGEIDRTFAVAREEFDTVVKELEEARKSLYEGEARIKRAE-EEKERLKAEILTGEARLPGLRE-----RAENLRRLVEEKRAEISELERRLSSITSFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERELAKLRGRIERLERKRDKLKKALENPEA-RELTEKIRAVEKEIAALREELSRVEGKLE-------------------------------------------------------------------------------------------------------------------------------- |
| 10 | 1sjjA | 0.09 | 0.05 | 1.93 | 0.67 | DEthreader | | --------PENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLS------------NR-PAFMP-SEGKMVSDI-NNAWGGLEQAEKGYEEWLLNEIRRLERLDLAFIAQVNCQICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYARAILGINKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMIYIRTINEVENQILTRDANFRASFNHFRACLISMG-----------YN-MGE-EF---------MGVVT------------------------------------------------------------------------------------------------------------------------------------- |
| (a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
| (b) | ID2 is the number of template residues identical to query divided by query sequence length. |
| (c) | Cov is equal the number of aligned template residues divided by query sequence length. |
| (d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
| (e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
| (f) | Template residues identical to query sequence are highlighted in color. |
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