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HomodimerDB

Download database

  • Download all database entries: Table for detailed information of the dimers (format explanation), FASTA sequence of individual chains
  • Download sequence clusters: List of clusters, Membership of the cluster
  • Download database entries further clustered down to more stringent sequence identity cutoffs:
         80% sequence identity cutoff: List of dimers List of individual chains FASTA sequence of individual chains
         70% sequence identity cutoff: List of dimers List of individual chains FASTA sequence of individual chains
         60% sequence identity cutoff: List of dimers List of individual chains FASTA sequence of individual chains
         50% sequence identity cutoff: List of dimers List of individual chains FASTA sequence of individual chains
         40% sequence identity cutoff: List of dimers List of individual chains FASTA sequence of individual chains
         30% sequence identity cutoff: List of dimers List of individual chains FASTA sequence of individual chains
  • Download PDB files for individual chains of all database entries: (We provide a script to download all PDB files listed below. The script can be run by: bash download.sh)

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