2bk1/1/8:A/9:A |
| >2bk1-a1-m8-cA (length=444) [Search sequence] |
LASNGDKIESFVPKEGKKTGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADK
AFVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSST
ARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSAD
LPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKA
LIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNP
AYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYD
KEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDV
PLTNNINVSIWGTTLYPGSSITYN |
| >2bk1-a1-m9-cA (length=444) [Search sequence] |
LASNGDKIESFVPKEGKKTGNKFIVVERQKRSLTTSPVDISIIDSVNDRTYPGALQLADK
AFVENRPTILMVKRKPININIDLPGLKGENSIKVDDPTYGKVSGAIDELVSKWNEKYSST
ARTQYSESMVYSKSQISSALNVNAKVLENSLGVDFNAVANNEKKVMILAYKQIFYTVSAD
LPKNPSDLFDDSVTFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLETTSSSKDVQAAFKA
LIKNTDIKNSQQYKDIYENSSFTAVVLGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNP
AYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSKGKINLDHSGAYVAQFEVAWDEVSYD
KEGNEVLTHKTWDGNYQDKTAHYSTVIPLEANARNIRIKARECTGLAWEWWRDVISEYDV
PLTNNINVSIWGTTLYPGSSITYN |
|
| PDB ID |
2bk1 (database links:
RCSB PDB
PDBe
PDBj
PDBsum) |
| Title |
The pore structure of pneumolysin, obtained by fitting the alpha carbon trace of perfringolysin O into a cryo-EM map |
| Assembly ID |
1 |
| Resolution |
29.0Å |
| Method of structure determination |
ELECTRON MICROSCOPY |
| Number of inter-chain contacts |
171 |
| Sequence identity between the two chains |
1.0 |
|
|
Chain 1 |
Chain 2 |
| Model ID |
8 |
9 |
| Chain ID |
A |
A |
| UniProt accession |
P0C2E9 |
P0C2E9 |
| Species |
1502 (Clostridium perfringens) |
1502 (Clostridium perfringens) |
|
Switch viewer: [NGL] [JSmol]
|
Dimer structure:
Chain 1 in red;
Chain 2 in blue.
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Full biological assembly
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| Other dimers with similar sequences and structures |
2bk1/1/10:A/11:A 2bk1/1/10:A/9:A 2bk1/1/11:A/12:A 2bk1/1/12:A/13:A 2bk1/1/13:A/14:A 2bk1/1/14:A/15:A 2bk1/1/15:A/16:A 2bk1/1/16:A/17:A 2bk1/1/17:A/18:A 2bk1/1/18:A/19:A 2bk1/1/19:A/20:A 2bk1/1/1:A/2:A 2bk1/1/1:A/38:A 2bk1/1/20:A/21:A 2bk1/1/21:A/22:A 2bk1/1/22:A/23:A 2bk1/1/23:A/24:A 2bk1/1/24:A/25:A 2bk1/1/25:A/26:A 2bk1/1/26:A/27:A 2bk1/1/27:A/28:A 2bk1/1/28:A/29:A 2bk1/1/29:A/30:A 2bk1/1/2:A/3:A 2bk1/1/30:A/31:A 2bk1/1/31:A/32:A 2bk1/1/32:A/33:A 2bk1/1/33:A/34:A 2bk1/1/34:A/35:A 2bk1/1/35:A/36:A 2bk1/1/36:A/37:A 2bk1/1/37:A/38:A 2bk1/1/3:A/4:A 2bk1/1/4:A/5:A 2bk1/1/5:A/6:A 2bk1/1/6:A/7:A 2bk1/1/7:A/8:A |
| Other dimers with similar sequences but different poses |
2bk2/1/8:A/9:A 2bk2/1/10:A/11:A 2bk2/1/10:A/9:A 2bk2/1/11:A/12:A 2bk2/1/12:A/13:A 2bk2/1/13:A/14:A 2bk2/1/14:A/15:A 2bk2/1/15:A/16:A 2bk2/1/16:A/17:A 2bk2/1/17:A/18:A 2bk2/1/18:A/19:A 2bk2/1/19:A/20:A 2bk2/1/1:A/2:A 2bk2/1/1:A/31:A 2bk2/1/20:A/21:A 2bk2/1/21:A/22:A 2bk2/1/22:A/23:A 2bk2/1/23:A/24:A 2bk2/1/24:A/25:A 2bk2/1/25:A/26:A 2bk2/1/26:A/27:A 2bk2/1/27:A/28:A 2bk2/1/28:A/29:A 2bk2/1/29:A/30:A 2bk2/1/2:A/3:A 2bk2/1/30:A/31:A 2bk2/1/3:A/4:A 2bk2/1/4:A/5:A 2bk2/1/5:A/6:A 2bk2/1/6:A/7:A 2bk2/1/7:A/8:A
1pfo/1/1:A/2:A 5dhl/1/1:A/1:B |
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