2r5j/3/1:N/1:O

Sequences
>2r5j-a3-m1-cN (length=417) [Search sequence]
AVVSTDEYVTRTNIYYHAGSSRLLAVGHPYYAIKKQDSNKIAVPKVSGLQYRVFRVKLPD
PNKFGFPDTSFYDPASQRLVWACTGVEVGRGQPLGVGISGHPLLNKLDDTENSNKYVGNS
GTDNRECISMDYKQTQLCLIGCRPPIGEHWGKGTPSNANQVKAGECPPLELLNTVLQDGD
MVDTGFGAMDFTTLQANKSDVPLDICSSICKYPDYLKMVSEPYGDMLFFYLRREQMFVRH
LFNRAGTVGETVPADLYIKGTTGTLPSTSYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNN
GICWSNQLFVTVVDTTRSTNMSVCSAVSSSDSTYKNDNFKEYLRHGEEYDLQFIFQLCKI
TLTADVMTYIHSMNPSILEDWNPLKNYTFWEVDLKEKFSADLDQFPLGRKFLLQAGL
>2r5j-a3-m1-cO (length=417) [Search sequence]
AVVSTDEYVTRTNIYYHAGSSRLLAVGHPYYAIKKQDSNKIAVPKVSGLQYRVFRVKLPD
PNKFGFPDTSFYDPASQRLVWACTGVEVGRGQPLGVGISGHPLLNKLDDTENSNKYVGNS
GTDNRECISMDYKQTQLCLIGCRPPIGEHWGKGTPSNANQVKAGECPPLELLNTVLQDGD
MVDTGFGAMDFTTLQANKSDVPLDICSSICKYPDYLKMVSEPYGDMLFFYLRREQMFVRH
LFNRAGTVGETVPADLYIKGTTGTLPSTSYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNN
GICWSNQLFVTVVDTTRSTNMSVCSAVSSSDSTYKNDNFKEYLRHGEEYDLQFIFQLCKI
TLTADVMTYIHSMNPSILEDWNPLKNYTFWEVDLKEKFSADLDQFPLGRKFLLQAGL
Structure information
PDB ID 2r5j (database links: RCSB PDB PDBe PDBj PDBsum)
Title Pentamer Structure of Major Capsid protein L1 of Human Papilloma Virus Type 35
Assembly ID 3
Resolution 3.3Å
Method of structure determination X-RAY DIFFRACTION
Number of inter-chain contacts 237
Sequence identity between the two chains 1.0
Chain information
Chain 1 Chain 2
Model ID 1 1
Chain ID N O
UniProt accession P27232 P27232
Species 10587 (human papillomavirus 35) 10587 (human papillomavirus 35)
3D structure
Switch viewer: [NGL] [JSmol]
Dimer structure: Chain 1 in red; Chain 2 in blue.
Color: [By chain]   [By residue index]  
Spin: [Spin off]   [Spin on]   [Reset]
Render: [Low quality]   [High quality]  
Background: [Black]   [White]  
Download: 2r5j-a3-m1-cN_2r5j-a3-m1-cO.pdb.gz
Full biological assembly
Color: [By chain]   [By residue index]  
Spin: [Spin off]   [Spin on]   [Reset]
Render: [Low quality]   [High quality]  
Background: [Black quality]   [White quality]  
Download: 2r5j-assembly3.cif.gz
Similar dimers
Other dimers with similar sequences and structures 2r5j/1/1:A/1:B 2r5j/1/1:A/1:E 2r5j/1/1:B/1:C 2r5j/1/1:C/1:D 2r5j/1/1:D/1:E 2r5j/2/1:F/1:G 2r5j/2/1:F/1:J 2r5j/2/1:G/1:H 2r5j/2/1:H/1:I 2r5j/2/1:I/1:J 2r5j/3/1:K/1:L 2r5j/3/1:K/1:O 2r5j/3/1:L/1:M 2r5j/3/1:M/1:N
Other dimers with similar sequences but different poses
  • 2r5j/3/1:M/1:O 2r5j/1/1:A/1:C 2r5j/1/1:A/1:D 2r5j/2/1:F/1:H 2r5j/2/1:G/1:J 2r5j/2/1:H/1:J 2r5j/3/1:K/1:M 2r5j/3/1:L/1:N 2r5j/3/1:L/1:O
  • [Back to Home]