3der/3/1:C/2:D

Sequences
>3der-a3-m1-cC (length=341) [Search sequence]
RIVNVKLSLKRYEYEKPFHITGSVSSESRNVEVEIVLESGVKGYGEASPSFRVNGERVEA
LLAIENAVREMITGIDVRNYARIFEITDRLFGFPSLKAAVQFATLDALSQELGTQVCYLL
GGKRDEIETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAVEEIAKVTRG
AKYIVDANMGYTQKEAVEFARAVYQKGIDIAVYEQPVRREDIEGLKFVRFHSPFPVAADE
SARTKFDVMRLVKEEAVDYVNIKLMKSGISDALAIVEIAESSGLKLMIGCMGESSLGINQ
SVHFALGTGAFEFHDLDSHLMLKEEVFRGKFIQDGPRMRVK
>3der-a3-m2-cD (length=341) [Search sequence]
RIVNVKLSLKRYEYEKPFHITGSVSSESRNVEVEIVLESGVKGYGEASPSFRVNGERVEA
LLAIENAVREMITGIDVRNYARIFEITDRLFGFPSLKAAVQFATLDALSQELGTQVCYLL
GGKRDEIETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAVEEIAKVTRG
AKYIVDANMGYTQKEAVEFARAVYQKGIDIAVYEQPVRREDIEGLKFVRFHSPFPVAADE
SARTKFDVMRLVKEEAVDYVNIKLMKSGISDALAIVEIAESSGLKLMIGCMGESSLGINQ
SVHFALGTGAFEFHDLDSHLMLKEEVFRGKFIQDGPRMRVK
Structure information
PDB ID 3der (database links: RCSB PDB PDBe PDBj PDBsum)
Title Crystal structure of dipeptide epimerase from Thermotoga maritima complexed with L-Ala-L-Lys dipeptide
Assembly ID 3
Resolution 1.9Å
Method of structure determination X-RAY DIFFRACTION
Number of inter-chain contacts 85
Sequence identity between the two chains 1.0
PubMed citation 19000819
Chain information
Chain 1 Chain 2
Model ID 1 2
Chain ID C D
UniProt accession Q9WXM1 Q9WXM1
Species 243274 (Thermotoga maritima MSB8) 243274 (Thermotoga maritima MSB8)
Function annotation BioLiP:3derC BioLiP:3derD
3D structure
Switch viewer: [NGL] [JSmol]
Dimer structure: Chain 1 in red; Chain 2 in blue.
Download: 3der-a3-m1-cC_3der-a3-m2-cD.pdb.gz
Full biological assembly
Download: 3der-assembly3.cif.gz
Similar dimers
Other dimers with similar sequences and structures 2zad/1/1:A/1:B 2zad/1/2:A/2:B 2zad/1/3:A/3:B 2zad/1/4:A/4:B 2zad/2/1:C/1:D 2zad/2/5:C/5:D 2zad/2/6:C/6:D 2zad/2/7:C/7:D 3deq/1/1:A/1:B 3deq/2/1:C/2:D 3deq/3/1:A/1:B 3deq/3/1:C/2:D 3deq/3/1:D/2:C 3deq/3/2:A/2:B 3der/1/1:A/1:B 3der/2/1:C/2:D 3der/3/1:A/1:B 3der/3/1:D/2:C 3der/3/2:A/2:B 3des/1/1:A/1:B 3des/2/1:C/2:D 3des/3/1:A/1:B 3des/3/1:C/2:D 3des/3/1:D/2:C 3des/3/2:A/2:B 3dfy/1/1:B/1:A 3dfy/1/1:D/1:C 3dfy/1/1:E/1:F 3dfy/1/1:G/1:H 3dfy/2/1:J/1:I 3dfy/2/1:K/1:L 3dfy/2/1:N/1:M 3dfy/2/1:O/1:P
Other dimers with similar sequences but different poses
  • 3der/3/2:B/2:D 2zad/1/1:A/3:A 2zad/1/1:A/4:A 2zad/1/1:B/3:B 2zad/1/1:B/4:B 2zad/1/2:A/3:A 2zad/1/2:A/4:A 2zad/1/2:B/3:B 2zad/1/2:B/4:B 2zad/2/1:C/6:C 2zad/2/1:C/7:C 2zad/2/1:D/6:D 2zad/2/1:D/7:D 2zad/2/5:C/6:C 2zad/2/5:C/7:C 2zad/2/5:D/6:D 2zad/2/5:D/7:D 3deq/3/1:A/1:C 3deq/3/1:A/2:C 3deq/3/1:B/1:D 3deq/3/1:B/2:D 3deq/3/1:C/2:A 3deq/3/1:D/2:B 3deq/3/2:A/2:C 3deq/3/2:B/2:D 3der/3/1:A/1:C 3der/3/1:A/2:C 3der/3/1:B/1:D 3der/3/1:B/2:D 3der/3/1:C/2:A 3der/3/1:D/2:B 3der/3/2:A/2:C 3des/3/1:A/1:C 3des/3/1:A/2:C 3des/3/1:B/1:D 3des/3/1:B/2:D 3des/3/1:C/2:A 3des/3/1:D/2:B 3des/3/2:A/2:C 3des/3/2:B/2:D 3dfy/1/1:B/1:C 3dfy/1/1:D/1:A 3dfy/1/1:E/1:D 3dfy/1/1:E/1:H 3dfy/1/1:F/1:C 3dfy/1/1:G/1:B 3dfy/1/1:G/1:F 3dfy/1/1:H/1:A 3dfy/2/1:J/1:M 3dfy/2/1:J/1:O 3dfy/2/1:K/1:N 3dfy/2/1:K/1:P 3dfy/2/1:L/1:M 3dfy/2/1:L/1:O 3dfy/2/1:N/1:I 3dfy/2/1:P/1:I
  • 3der/3/2:A/2:D 2zad/1/1:A/3:B 2zad/1/1:B/4:A 2zad/1/2:A/4:B 2zad/1/2:B/3:A 2zad/2/1:C/6:D 2zad/2/1:D/7:C 2zad/2/5:C/7:D 2zad/2/5:D/6:C 3deq/3/1:A/1:D 3deq/3/1:B/1:C 3deq/3/2:A/2:D 3deq/3/2:B/2:C 3der/3/1:A/1:D 3der/3/1:B/1:C 3der/3/2:B/2:C 3des/3/1:A/1:D 3des/3/1:B/1:C 3des/3/2:A/2:D 3des/3/2:B/2:C 3dfy/1/1:B/1:D 3dfy/1/1:E/1:C 3dfy/1/1:G/1:A 3dfy/1/1:H/1:F 3dfy/2/1:J/1:N 3dfy/2/1:K/1:M 3dfy/2/1:L/1:P 3dfy/2/1:O/1:I
    		•

    [Back to Home]