3f9k/9/1:h/1:g |
| >3f9k-a9-m1-ch (length=196) [Search sequence] |
VLEKIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCVNAELGTWQMDCTHLEG
KIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVA
WWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGG
IGDMTPSERLINMITT |
| >3f9k-a9-m1-cg (length=204) [Search sequence] |
KIEPAQEEHEKYHSNVKELSHKFGIPNLVARQIVNSCAQCQQKGEAIHGQVNAELGTWQM
DCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTS
QEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCM
NFKRRGGIGDMTPSERLINMITTE |
|
| PDB ID |
3f9k (database links:
RCSB PDB
PDBe
PDBj
PDBsum) |
| Title |
Two domain fragment of HIV-2 integrase in complex with LEDGF IBD |
| Assembly ID |
9 |
| Resolution |
3.2Å |
| Method of structure determination |
X-RAY DIFFRACTION |
| Number of inter-chain contacts |
60 |
| Sequence identity between the two chains |
0.985 |
| PubMed citation |
19132083 |
|
|
Chain 1 |
Chain 2 |
| Model ID |
1 |
1 |
| Chain ID |
h |
g |
| UniProt accession |
P04584 |
P04584 |
| Species |
11720 (Human immunodeficiency virus type 2 (ISOLATE ROD)) |
11720 (Human immunodeficiency virus type 2 (ISOLATE ROD)) |
| Function annotation |
BioLiP:3f9kh |
BioLiP:3f9kg |
|
Switch viewer: [NGL] [JSmol]
|
Dimer structure:
Chain 1 in red;
Chain 2 in blue.
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Full biological assembly
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| Other dimers with similar sequences and structures |
3f9k/10/1:l/1:k 3f9k/11/1:p/1:o 3f9k/12/1:t/1:s 3f9k/13/1:F/1:E 3f9k/13/1:h/1:g 3f9k/13/1:V/1:U 3f9k/14/1:B/1:A 3f9k/14/1:J/1:I 3f9k/14/1:Z/1:Y 3f9k/15/1:l/1:k 3f9k/15/1:p/1:o 3f9k/15/1:t/1:s 3f9k/16/1:d/1:c 3f9k/16/1:N/1:M 3f9k/16/1:R/1:Q 3f9k/1/1:B/1:A 3f9k/2/1:F/1:E 3f9k/3/1:J/1:I 3f9k/4/1:N/1:M 3f9k/5/1:R/1:Q 3f9k/6/1:V/1:U 3f9k/7/1:Z/1:Y 3f9k/8/1:d/1:c |
| Other dimers with similar sequences but different poses |
3f9k/16/1:Q/1:c 3f9k/13/1:E/1:g 3f9k/13/1:E/1:U 3f9k/13/1:U/1:g 3f9k/14/1:A/1:I 3f9k/14/1:A/1:Y 3f9k/14/1:I/1:Y 3f9k/15/1:k/1:o 3f9k/15/1:k/1:s 3f9k/15/1:o/1:s 3f9k/16/1:M/1:c 3f9k/16/1:M/1:Q
3f9k/16/1:d/1:M 3f9k/13/1:F/1:U 3f9k/13/1:h/1:E 3f9k/13/1:V/1:g 3f9k/14/1:B/1:I 3f9k/14/1:J/1:Y 3f9k/14/1:Z/1:A 3f9k/15/1:l/1:o 3f9k/15/1:p/1:s 3f9k/15/1:t/1:k 3f9k/16/1:N/1:Q 3f9k/16/1:R/1:c |
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