3njq/3/5:B/8:A

Sequences
>3njq-a3-m5-cB (length=187) [Search sequence]
GLYVGGFVDVVSPKLEQELYLDPDQVTDYLPVTEPLPITIEHLPETEVGWTLGLFQVSHG
IFCTGAITSPAFLELASRLADTSHVARAPVKNLPKEPLLEILHTWLPGLSLSSIHPREPS
GPVFQHVSLCALGRRRGTVAVYGHDAEWVVSRFSSVSKSERAHILQHVSSRLEDLSTPNF
VSPLETL
>3njq-a3-m8-cA (length=189) [Search sequence]
GLYVGGFVDVVSPKLEQELYLDPDQVTDYLPVTEPLPITIEHLPETEVGWTLGLFQVSHG
IFCTGAITSPAFLELASRLADTSHVARAPVKNLPKEPLLEILHTWLPGLSLSSIHPRELS
QTPSGPVFQHVSLCALGRRRGTVAVYGHDAEWVVSRFSSVSKSERAHILQHVSSCRLEDL
STPNFVSPL
Structure information
PDB ID 3njq (database links: RCSB PDB PDBe PDBj PDBsum)
Title Crystal structure of Kaposi's sarcoma-associated herpesvirus protease in complex with dimer disruptor
Assembly ID 3
Resolution 2Å
Method of structure determination X-RAY DIFFRACTION
Number of inter-chain contacts 54
Sequence identity between the two chains 0.984
PubMed citation 21723875
Chain information
Chain 1 Chain 2
Model ID 5 8
Chain ID B A
UniProt accession P88911 P88911
Species 435895 (Human herpesvirus 8 type M) 435895 (Human herpesvirus 8 type M)
Function annotation BioLiP:3njqB BioLiP:3njqA
3D structure
Switch viewer: [NGL] [JSmol]
Dimer structure: Chain 1 in red; Chain 2 in blue.
Download: 3njq-a3-m5-cB_3njq-a3-m8-cA.pdb.gz
Full biological assembly
Download: 3njq-assembly3.cif.gz
Similar dimers
Other dimers with similar sequences and structures 3njq/3/1:B/7:A 3njq/3/3:B/6:A 3njq/3/4:B/2:A 4p2t/3/3:B/1:A 4p2t/3/4:B/2:A 4p3h/3/3:B/1:A 4p3h/3/4:B/2:A
Other dimers with similar sequences but different poses
  • 3njq/3/3:B/8:A 3njq/1/1:B/2:A 3njq/3/1:B/2:A 3njq/3/4:B/7:A 3njq/3/5:B/6:A 4p2t/3/3:B/2:A 4p2t/3/4:B/1:A 4p3h/3/3:B/2:A 4p3h/3/4:B/1:A
  • 3njq/2/5:B/5:A 3njq/2/1:B/1:A 3njq/2/3:B/3:A 3njq/2/4:B/4:A
  • 3njq/3/3:B/5:B 3njq/2/1:B/4:B 3njq/2/3:B/5:B 3njq/3/1:B/4:B 4p2t/3/3:B/4:B 4p3h/3/3:B/4:B
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