4f5x/1/8:W/9:W |
| >4f5x-a1-m8-cW (length=975) [Search sequence] |
GKYNLILSEYLSFIYNSVQIPIYYSSNSELENRCIEFHSKCLENSKNGLSLRKLFVEYND
VIENATLLSILSYSYDKYNAVERKLVKYAKGKPLEADLTVNELDYENNKMTSELFPTAEE
YTDSLMDPAILTSLSSNLNAVMFWLEKHENDVAEKLKVYKRRLDLFTIVASTINKYGVPR
HNAKYRYEYDVMKDKPYYLVTWANSSIEMLMSVFSHDDYLIAKELIVLSYSNRSTLAKLV
SSPMSILVALVDIVPDQTFDELNQMLDNMRKAGLVDIPKMIQDWLVDRSIEKFPLMAKIY
SWSFHVGFRKQKMLDAALDQEMYEYTLIDEVVKMLEEPDDHLLRDSELAGLLSMSSASNG
ESRQLKFGRKTIFSTKKNMHVMDDMANERYTPGIIPPVNVDKPIPLGRRDVPGRRTRIIF
ILPYEYFIAQHAVVEKMLIYAKHTREYAEFYSQSNQLLSYGDVFVLYTDVSQWDSSQHNT
QPFRKGIIMGLKVLQTLNLYKQTQINLMDSYVQIPDGNVIKKIQYGAVASGEKQTKAANS
IANLALIKTVLHATKIIRVDGDDNYAVLIQDVSNDVRETYARMNAKVKALVSVGIEIAKR
YIAGGKIFFRAGINLLNNEKRGQSTQWDQAAILYSNYIVNRLRGFETDREFILTKIMQMT
SVAITGSLRLFPSERVLTTNSTFKVFDSEDFIIEYGTTVDEVYIQRAFMSLSSQKSGIAD
EIAASSTFKNYVTRLSEQLLFSKNNIVSRGIALTEKAKLNSYAPISLEKRRAQISALLTM
LQKPVTFKSSKITINDILRDIKPFFTVSDAHLPIQYQKFMPTLPDNVQYIIQCIGSRTYQ
IEDDGSKSAISRLISSVYKPSIEELYKVISLHENEIYLSLGIYSDKYRILESYVYNLLSI
NYGCYQLFDFNSPDLKLIRFILHLYAKLEVINYAIKNGSWISLFCNYPKSEMIKLWKKMW
NITSLRSPYTNANFF |
| >4f5x-a1-m9-cW (length=975) [Search sequence] |
GKYNLILSEYLSFIYNSVQIPIYYSSNSELENRCIEFHSKCLENSKNGLSLRKLFVEYND
VIENATLLSILSYSYDKYNAVERKLVKYAKGKPLEADLTVNELDYENNKMTSELFPTAEE
YTDSLMDPAILTSLSSNLNAVMFWLEKHENDVAEKLKVYKRRLDLFTIVASTINKYGVPR
HNAKYRYEYDVMKDKPYYLVTWANSSIEMLMSVFSHDDYLIAKELIVLSYSNRSTLAKLV
SSPMSILVALVDIVPDQTFDELNQMLDNMRKAGLVDIPKMIQDWLVDRSIEKFPLMAKIY
SWSFHVGFRKQKMLDAALDQEMYEYTLIDEVVKMLEEPDDHLLRDSELAGLLSMSSASNG
ESRQLKFGRKTIFSTKKNMHVMDDMANERYTPGIIPPVNVDKPIPLGRRDVPGRRTRIIF
ILPYEYFIAQHAVVEKMLIYAKHTREYAEFYSQSNQLLSYGDVFVLYTDVSQWDSSQHNT
QPFRKGIIMGLKVLQTLNLYKQTQINLMDSYVQIPDGNVIKKIQYGAVASGEKQTKAANS
IANLALIKTVLHATKIIRVDGDDNYAVLIQDVSNDVRETYARMNAKVKALVSVGIEIAKR
YIAGGKIFFRAGINLLNNEKRGQSTQWDQAAILYSNYIVNRLRGFETDREFILTKIMQMT
SVAITGSLRLFPSERVLTTNSTFKVFDSEDFIIEYGTTVDEVYIQRAFMSLSSQKSGIAD
EIAASSTFKNYVTRLSEQLLFSKNNIVSRGIALTEKAKLNSYAPISLEKRRAQISALLTM
LQKPVTFKSSKITINDILRDIKPFFTVSDAHLPIQYQKFMPTLPDNVQYIIQCIGSRTYQ
IEDDGSKSAISRLISSVYKPSIEELYKVISLHENEIYLSLGIYSDKYRILESYVYNLLSI
NYGCYQLFDFNSPDLKLIRFILHLYAKLEVINYAIKNGSWISLFCNYPKSEMIKLWKKMW
NITSLRSPYTNANFF |
|
| PDB ID |
4f5x (database links:
RCSB PDB
PDBe
PDBj
PDBsum) |
| Title |
Location of the dsRNA-dependent polymerase, VP1, in rotavirus particles |
| Assembly ID |
1 |
| Resolution |
5Å |
| Method of structure determination |
X-RAY DIFFRACTION |
| Number of inter-chain contacts |
3287 |
| Sequence identity between the two chains |
1.0 |
|
|
Chain 1 |
Chain 2 |
| Model ID |
8 |
9 |
| Chain ID |
W |
W |
| UniProt accession |
O37061 |
O37061 |
| Species |
36434 (Simian 11 rotavirus (serotype 3 / strain SA11-Patton)) |
36434 (Simian 11 rotavirus (serotype 3 / strain SA11-Patton)) |
|
Switch viewer: [NGL] [JSmol]
|
Dimer structure:
Chain 1 in red;
Chain 2 in blue.
|
Full biological assembly
|
|
| Other dimers with similar sequences and structures |
4au6/1/1:A/1:B 4au6/1/1:A/1:E 4au6/1/1:B/1:C 4au6/1/1:C/1:D 4au6/1/1:D/1:E 4f5x/1/10:W/6:W 4f5x/1/10:W/9:W 4f5x/1/11:W/12:W 4f5x/1/11:W/15:W 4f5x/1/12:W/13:W 4f5x/1/13:W/14:W 4f5x/1/14:W/15:W 4f5x/1/16:W/17:W 4f5x/1/16:W/20:W 4f5x/1/17:W/18:W 4f5x/1/18:W/19:W 4f5x/1/19:W/20:W 4f5x/1/1:W/2:W 4f5x/1/1:W/5:W 4f5x/1/21:W/22:W 4f5x/1/21:W/25:W 4f5x/1/22:W/23:W 4f5x/1/23:W/24:W 4f5x/1/24:W/25:W 4f5x/1/26:W/27:W 4f5x/1/26:W/30:W 4f5x/1/27:W/28:W 4f5x/1/28:W/29:W 4f5x/1/29:W/30:W 4f5x/1/2:W/3:W 4f5x/1/31:W/32:W 4f5x/1/31:W/35:W 4f5x/1/32:W/33:W 4f5x/1/33:W/34:W 4f5x/1/34:W/35:W 4f5x/1/36:W/37:W 4f5x/1/36:W/40:W 4f5x/1/37:W/38:W 4f5x/1/38:W/39:W 4f5x/1/39:W/40:W 4f5x/1/3:W/4:W 4f5x/1/41:W/42:W 4f5x/1/41:W/45:W 4f5x/1/42:W/43:W 4f5x/1/43:W/44:W 4f5x/1/44:W/45:W 4f5x/1/46:W/47:W 4f5x/1/46:W/50:W 4f5x/1/47:W/48:W 4f5x/1/48:W/49:W 4f5x/1/49:W/50:W 4f5x/1/4:W/5:W 4f5x/1/51:W/52:W 4f5x/1/51:W/55:W 4f5x/1/52:W/53:W 4f5x/1/53:W/54:W 4f5x/1/54:W/55:W 4f5x/1/56:W/57:W 4f5x/1/56:W/60:W 4f5x/1/57:W/58:W 4f5x/1/58:W/59:W 4f5x/1/59:W/60:W 4f5x/1/6:W/7:W 4f5x/1/7:W/8:W |
| Other dimers with similar sequences but different poses |
4f5x/1/7:W/9:W 4au6/1/1:A/1:C 4au6/1/1:A/1:D 4au6/1/1:B/1:D 4au6/1/1:B/1:E 4au6/1/1:C/1:E 4f5x/1/10:W/7:W 4f5x/1/10:W/8:W 4f5x/1/11:W/13:W 4f5x/1/11:W/14:W 4f5x/1/12:W/14:W 4f5x/1/12:W/15:W 4f5x/1/13:W/15:W 4f5x/1/16:W/18:W 4f5x/1/16:W/19:W 4f5x/1/17:W/19:W 4f5x/1/17:W/20:W 4f5x/1/18:W/20:W 4f5x/1/1:W/3:W 4f5x/1/1:W/4:W 4f5x/1/21:W/23:W 4f5x/1/21:W/24:W 4f5x/1/22:W/24:W 4f5x/1/22:W/25:W 4f5x/1/23:W/25:W 4f5x/1/26:W/28:W 4f5x/1/26:W/29:W 4f5x/1/27:W/29:W 4f5x/1/27:W/30:W 4f5x/1/28:W/30:W 4f5x/1/2:W/4:W 4f5x/1/2:W/5:W 4f5x/1/31:W/33:W 4f5x/1/31:W/34:W 4f5x/1/32:W/34:W 4f5x/1/32:W/35:W 4f5x/1/33:W/35:W 4f5x/1/36:W/38:W 4f5x/1/36:W/39:W 4f5x/1/37:W/39:W 4f5x/1/37:W/40:W 4f5x/1/38:W/40:W 4f5x/1/3:W/5:W 4f5x/1/41:W/43:W 4f5x/1/41:W/44:W 4f5x/1/42:W/44:W 4f5x/1/42:W/45:W 4f5x/1/43:W/45:W 4f5x/1/46:W/48:W 4f5x/1/46:W/49:W 4f5x/1/47:W/49:W 4f5x/1/47:W/50:W 4f5x/1/48:W/50:W 4f5x/1/51:W/53:W 4f5x/1/51:W/54:W 4f5x/1/52:W/54:W 4f5x/1/52:W/55:W 4f5x/1/53:W/55:W 4f5x/1/56:W/58:W 4f5x/1/56:W/59:W 4f5x/1/57:W/59:W 4f5x/1/57:W/60:W 4f5x/1/58:W/60:W 4f5x/1/6:W/8:W 4f5x/1/6:W/9:W |
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