5hto/1/1:B/1:D

Sequences
>5hto-a1-m1-cB (length=303) [Search sequence]
KPKIVLVGSGMIGGVMATLIVQKNLGDVVMFDVVKNMPQGKALDTSHSNVMAYSNCKVTG
SNSYDDLKGADVVIVTAGFTKRDDLLPLNNKIMIEIGGHIKNLCPNAFIIVVTNPVDVMV
QLLFEHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNALIVGAHGNKMVLLKRYI
TVGGIPLQEFINNKKITDEEVEGIFDRTVNTALEIVNLLASPYVAPAAAIIEMAESYLKD
IKKVLVCSTLLEGQYGHSNIFGGTPLVIGGTGVEQVIELQLNAEEKTKFDEAVAETKRMK
ALI
>5hto-a1-m1-cD (length=304) [Search sequence]
KPKIVLVGSGMIGGVMATLIVQKNLGDVVMFDVVKNMPQGKALDTSHSNVMAYSNCKVTG
SNSYDDLKGADVVIVTAGFTKAPDDLLPLNNKIMIEIGGHIKNLCPNAFIIVVTNPVDVM
VQLLFEHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNALIVGAHGNKMVLLKRY
ITVGGIPLQEFINNKKITDEEVEGIFDRTVNTALEIVNLLASPYVAPAAAIIEMAESYLK
DIKKVLVCSTLLEGQYGHSNIFGGTPLVIGGTGVEQVIELQLNAEEKTKFDEAVAETKRM
KALI
Structure information
PDB ID 5hto (database links: RCSB PDB PDBe PDBj PDBsum)
Title Crystal structure of Plasmodium Vivax LDH in complex with a DNA aptamer called pL1 (tetrameric LDH in an asymmetric unit)
Assembly ID 1
Resolution 1.9Å
Method of structure determination X-RAY DIFFRACTION
Number of inter-chain contacts 78
Sequence identity between the two chains 0.997
PubMed citation 27725738
Chain information
Chain 1 Chain 2
Model ID 1 1
Chain ID B D
UniProt accession Q4PRK9 Q4PRK9
Species 5855 (Plasmodium vivax) 5855 (Plasmodium vivax)
Function annotation BioLiP:5htoB BioLiP:5htoD
3D structure
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Dimer structure: Chain 1 in red; Chain 2 in blue.
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Download: 5hto-a1-m1-cB_5hto-a1-m1-cD.pdb.gz
Full biological assembly
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Download: 5hto-assembly1.cif.gz
Similar dimers
Other dimers with similar sequences and structures 1oc4/1/1:A/1:B 1oc4/1/2:B/2:A 1t24/1/2:A/3:A 1t24/1/4:A/1:A 1t25/1/2:A/3:A 1t25/1/4:A/1:A 1t26/1/2:A/3:A 1t26/1/4:A/1:A 1t2c/1/2:A/3:A 1t2c/1/4:A/1:A 1t2d/1/1:A/4:A 1t2d/1/2:A/3:A 2a92/1/1:B/1:A 2a92/1/1:D/1:C 2a94/1/2:A/3:A 2a94/1/4:A/1:A 2aa3/1/1:B/1:A 2aa3/1/1:D/1:C 3zh2/1/1:A/1:C 4b7u/1/1:D/1:A 5hru/1/1:A/2:B 5hru/1/2:A/1:B 5hs4/1/1:A/3:A 5hs4/1/2:A/4:A 5hto/1/1:A/1:E 6txr/1/1:B/1:D 6txr/1/1:C/1:A
Other dimers with similar sequences but different poses
  • 5hs4/1/1:A/4:A 1oc4/1/1:A/2:A 1oc4/1/2:B/1:B 1t24/1/1:A/3:A 1t24/1/4:A/2:A 1t25/1/1:A/3:A 1t25/1/4:A/2:A 1t26/1/1:A/3:A 1t26/1/4:A/2:A 1t2c/1/1:A/3:A 1t2c/1/4:A/2:A 1t2d/1/1:A/3:A 1t2d/1/2:A/4:A 2a92/1/1:A/1:C 2a92/1/1:D/1:B 2a94/1/1:A/3:A 2a94/1/4:A/2:A 2aa3/1/1:A/1:C 2aa3/1/1:D/1:B 3zh2/1/1:B/1:A 3zh2/1/1:D/1:C 4b7u/1/1:B/1:A 5hru/1/1:A/1:B 5hru/1/2:A/2:B 5hs4/1/2:A/3:A 5hto/1/1:A/1:B 5hto/1/1:D/1:E 6txr/1/1:B/1:A 6txr/1/1:C/1:D
  • 5hto/1/1:B/1:E 1oc4/1/1:B/2:A 1oc4/1/2:B/1:A 1t24/1/1:A/2:A 1t24/1/4:A/3:A 1t25/1/1:A/2:A 1t25/1/4:A/3:A 1t26/1/1:A/2:A 1t26/1/4:A/3:A 1t2c/1/1:A/2:A 1t2c/1/4:A/3:A 1t2d/1/1:A/2:A 1t2d/1/3:A/4:A 2a92/1/1:B/1:C 2a92/1/1:D/1:A 2a94/1/1:A/2:A 2a94/1/4:A/3:A 2aa3/1/1:B/1:C 2aa3/1/1:D/1:A 3zh2/1/1:D/1:A 4b7u/1/1:C/1:A 5hru/1/1:A/2:A 5hru/1/1:B/2:B 5hs4/1/1:A/2:A 5hs4/1/3:A/4:A 5hto/1/1:A/1:D 6txr/1/1:A/1:D 6txr/1/1:B/1:C
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