5lkg/1/1:B/1:A |
| >5lkg-a1-m1-cB (length=307) [Search sequence] |
SKPFSLPILTLSELTNSRFPVPIDSLFTAQNNVLQVQCQNGRCTLDGELQGTTQLLPTGI
CAFRGRVTAQINQRDRWHMQLQNLNGTTYDPTDDVPAPLGTPDFKGVVFGMVSQRNVGND
APGSTRAQQAWVSTYSPQFVPKLGSVNLRISDNDDFQFQPTKFTPVGVNDDDDGHPFRQW
ELPNYSGELTLNMNLAPPVAPNFPGEQLLFFRSFVPCSGGYNQGIIDCLIPQEWIQHFYQ
ESAPSQSDVALIRYVNPDTGRTLFEAKLHRSGYITVAHSGDYPLVVPANGHFRFDSWVNQ
FYSLAPM |
| >5lkg-a1-m1-cA (length=308) [Search sequence] |
GSKPFSLPILTLSELTNSRFPVPIDSLFTAQNNVLQVQCQNGRCTLDGELQGTTQLLPTG
ICAFRGRVTAQINQRDRWHMQLQNLNGTTYDPTDDVPAPLGTPDFKGVVFGMVSQRNVGN
DAPGSTRAQQAWVSTYSPQFVPKLGSVNLRISDNDDFQFQPTKFTPVGVNDDDDGHPFRQ
WELPNYSGELTLNMNLAPPVAPNFPGEQLLFFRSFVPCSGGYNQGIIDCLIPQEWIQHFY
QESAPSQSDVALIRYVNPDTGRTLFEAKLHRSGYITVAHSGDYPLVVPANGHFRFDSWVN
QFYSLAPM |
|
| PDB ID |
5lkg (database links:
RCSB PDB
PDBe
PDBj
PDBsum) |
| Title |
Protruding domain of GII.17 norovirus Kawasaki308 in complex with 2-fucosyllactose (2'FL) |
| Assembly ID |
1 |
| Resolution |
1.51Å |
| Method of structure determination |
X-RAY DIFFRACTION |
| Number of inter-chain contacts |
128 |
| Sequence identity between the two chains |
1.0 |
| PubMed citation |
28505592 |
|
|
Chain 1 |
Chain 2 |
| Model ID |
1 |
1 |
| Chain ID |
B |
A |
| UniProt accession |
A0A0E4B1P1 |
A0A0E4B1P1 |
| Species |
1634342 (Norovirus Hu/GII/JP/2015/GII.P17_GII.17/Kawasaki308) |
1634342 (Norovirus Hu/GII/JP/2015/GII.P17_GII.17/Kawasaki308) |
| Function annotation |
BioLiP:5lkgB |
BioLiP:5lkgA |
|
Switch viewer: [NGL] [JSmol]
|
Dimer structure:
Chain 1 in red;
Chain 2 in blue.
|
Full biological assembly
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| Other dimers with similar sequences and structures |
5f4m/1/1:B/1:A 5f4o/1/1:A/1:B 5lkc/1/1:A/1:B 5lkk/1/1:A/1:B 5zus/1/1:A/1:B 5zv5/1/1:B/1:A 5zv7/1/1:A/1:B 8en3/1/1:A/1:B |
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