6vv5/1/1:B/1:C

Sequences
>6vv5-a1-m1-cB (length=1097) [Search sequence]
NFRRFFSKFNVQAPAVVVLGGYLPIVHGIFVSGFEIGISQPSGYQLYLHKATTARLRICQ
FPSNCLFNKAIPAHVVGITWDNDRVTVFSDKIYYFYFKNDWSRVATAMQYVYEPTYYMLN
VTSAGEDGISYQPCTANCIGYAANVFATEPNGHIPEGFSFNNWFLLSNDSTLVHGKVVSN
QPLLVNCLLAIPKIYQFFSFNQTIDGVCNGAAVQRAPEALRFNINDISVILASIVLHTAL
GTNFSFVCSNSSNPHLATPYYCFLKVDTYNSTVYKFLAVLPPTVREIVITKYGDVYVNGF
GYLHLGLLDAVTINFTGFWTIASTNFVDALIEVQGTAIQRILYCDDPVSQLKCSQVAFDL
DDGFYTISSREQPISFVTLPSFNDHSFVNITVSASFGANLIASDTTINGFSSFCVDTRQF
TISLFYNVTNVSKSQDSNCPFTLQSVNDYLSFSKFCVSTSLLASACTIDLFGYPESGVKF
TSLYFQFTKGELITGTPKPFEGVTDVSFMTLDVCTKYTIYGFKGEGIITLTNSSFLAGVY
YTSDSGQLLAFKNVTSGAVYSVTPCSFSEQAAYVDDDIVGVISSLSSSTFNSTRELPGFF
YHSNDGSNCTEPVLVYSNIGVCKSGSIGYVPSQSGQVKIAPTVTGNISIPTNFSMSIRTE
YLQLYNTPVSVDCATYVCNGNSRCKQLLTQYTAACKTIESALQLSARLESVEVNSMLTIS
DEALQLATISSFNGDGYNFTNVLGVSVVQKRSFIEDLLFNKVVDEDYKRCSNGRSVADLV
CAQYYSGVMVLPGVVDAEKLHMYSASLIGGMVLGGFTSAAALPFSYAVQARLNYLALQTD
VLQRNQQLLAESFNSAIGNITSAFESVKEAISQTSKGLNTVAHALTKVQEVVNSQGAALT
QLTVQLQHNFQAISSSIDDIYSRLDILSADAQVDRLITGRLSALNAFVAQTLTKYTEVQA
SRKLAQQKVNECVKSQSQRYGFCGGDGEHIFSLVQAAPQGLLFLHTVLVPSDFVDVIAIA
GLCVNDEIALTLREPGLVLFTHEEYFVSSRRMFEPRKPTVSDFVQIESCVVTYVNLTRDQ
LPDVIPDYIDVNKTLDE
>6vv5-a1-m1-cC (length=1097) [Search sequence]
NFRRFFSKFNVQAPAVVVLGGYLPIVHGIFVSGFEIGISQPSGYQLYLHKATTARLRICQ
FPSNCLFNKAIPAHVVGITWDNDRVTVFSDKIYYFYFKNDWSRVATAMQYVYEPTYYMLN
VTSAGEDGISYQPCTANCIGYAANVFATEPNGHIPEGFSFNNWFLLSNDSTLVHGKVVSN
QPLLVNCLLAIPKIYQFFSFNQTIDGVCNGAAVQRAPEALRFNINDISVILASIVLHTAL
GTNFSFVCSNSSNPHLATPYYCFLKVDTYNSTVYKFLAVLPPTVREIVITKYGDVYVNGF
GYLHLGLLDAVTINFTGFWTIASTNFVDALIEVQGTAIQRILYCDDPVSQLKCSQVAFDL
DDGFYTISSREQPISFVTLPSFNDHSFVNITVSASFGANLIASDTTINGFSSFCVDTRQF
TISLFYNVTNVSKSQDSNCPFTLQSVNDYLSFSKFCVSTSLLASACTIDLFGYPESGVKF
TSLYFQFTKGELITGTPKPFEGVTDVSFMTLDVCTKYTIYGFKGEGIITLTNSSFLAGVY
YTSDSGQLLAFKNVTSGAVYSVTPCSFSEQAAYVDDDIVGVISSLSSSTFNSTRELPGFF
YHSNDGSNCTEPVLVYSNIGVCKSGSIGYVPSQSGQVKIAPTVTGNISIPTNFSMSIRTE
YLQLYNTPVSVDCATYVCNGNSRCKQLLTQYTAACKTIESALQLSARLESVEVNSMLTIS
DEALQLATISSFNGDGYNFTNVLGVSVVQKRSFIEDLLFNKVVDEDYKRCSNGRSVADLV
CAQYYSGVMVLPGVVDAEKLHMYSASLIGGMVLGGFTSAAALPFSYAVQARLNYLALQTD
VLQRNQQLLAESFNSAIGNITSAFESVKEAISQTSKGLNTVAHALTKVQEVVNSQGAALT
QLTVQLQHNFQAISSSIDDIYSRLDILSADAQVDRLITGRLSALNAFVAQTLTKYTEVQA
SRKLAQQKVNECVKSQSQRYGFCGGDGEHIFSLVQAAPQGLLFLHTVLVPSDFVDVIAIA
GLCVNDEIALTLREPGLVLFTHEEYFVSSRRMFEPRKPTVSDFVQIESCVVTYVNLTRDQ
LPDVIPDYIDVNKTLDE
Structure information
PDB ID 6vv5 (database links: RCSB PDB PDBe PDBj PDBsum)
Title Cryo-EM structure of porcine epidemic diarrhea virus (PEDV) spike protein
Assembly ID 1
Resolution 3.5Å
Method of structure determination ELECTRON MICROSCOPY
Number of inter-chain contacts 390
Sequence identity between the two chains 1.0
PubMed citation 33378641
Chain information
Chain 1 Chain 2
Model ID 1 1
Chain ID B C
UniProt accession S5RJN4 S5RJN4
Species 28295 (Porcine epidemic diarrhea virus) 28295 (Porcine epidemic diarrhea virus)
Function annotation BioLiP:6vv5B BioLiP:6vv5C
3D structure
Switch viewer: [NGL] [JSmol]
Dimer structure: Chain 1 in red; Chain 2 in blue.
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Download: 6vv5-a1-m1-cB_6vv5-a1-m1-cC.pdb.gz
Full biological assembly
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Download: 6vv5-assembly1.cif.gz
Similar dimers
Other dimers with similar sequences and structures 6vv5/1/1:A/1:B 6vv5/1/1:A/1:C

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