6vyb/1/1:C/1:A |
| >6vyb-a1-m1-cC (length=960) [Search sequence] |
AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHNPVLPFNDGVYFASTEKSNI
IRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVNCTFEYVSFKNLREFVF
KNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLAYYVGYLQPRTF
LLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNL
CPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNV
YADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKNYNYLYRKPFE
RDISTPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNG
LTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTS
NEVAVLYQDVNCTEVNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQSIIAYTMS
LGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGS
FCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKSKRSFIE
DLLFNKVTNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFN
GIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLS
SNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAAT
KMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKA
HFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS |
| >6vyb-a1-m1-cA (length=966) [Search sequence] |
AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHPVLPFNDGVYFASTEKS
NIIRGWIFGTTLDSKSLLIVNNATNVVIKVCEFQFCNDPFLGVCTFEYVSFKNLREFVFK
NIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLAAYYVGYLQPRTF
LLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNL
CPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNV
YADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDNYNYLYRLFRKSN
LKPFERDISTFPLQSYGFQPTNVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVN
FNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITP
GTNTSNEVAVLYQDVNCTEVNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQSII
AYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLL
LQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKSK
RSFIEDLLFNKVTFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQ
MAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNT
LVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRAS
ANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAI
CHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPL
QPELDS |
|
| PDB ID |
6vyb (database links:
RCSB PDB
PDBe
PDBj
PDBsum) |
| Title |
SARS-CoV-2 spike ectodomain structure (open state) |
| Assembly ID |
1 |
| Resolution |
3.2Å |
| Method of structure determination |
ELECTRON MICROSCOPY |
| Number of inter-chain contacts |
317 |
| Sequence identity between the two chains |
0.993 |
|
|
Chain 1 |
Chain 2 |
| Model ID |
1 |
1 |
| Chain ID |
C |
A |
| UniProt accession |
P0DTC2 |
P0DTC2 |
| Species |
2697049 (Severe acute respiratory syndrome coronavirus 2) |
2697049 (Severe acute respiratory syndrome coronavirus 2) |
|
Switch viewer: [NGL] [JSmol]
|
Dimer structure:
Chain 1 in red;
Chain 2 in blue.
|
Full biological assembly
|
|
| Other dimers with similar sequences and structures |
6vyb/1/1:B/1:A 6x2a/1/1:B/1:A 6x2a/1/1:C/1:A 6x2b/1/1:B/1:A 6x2b/1/1:C/1:A 6xcm/1/1:A/1:B 6xcm/1/1:A/1:C 7k8z/1/1:A/1:C 7k8z/1/1:B/1:A 7kdh/1/1:B/1:A 7kdh/1/1:C/1:A 7kdj/1/1:B/1:A 7kdj/1/1:C/1:A 7kdl/1/1:B/1:A 7kdl/1/1:C/1:A 7ke9/1/1:B/1:A 7ke9/1/1:C/1:A 7kea/1/1:B/1:A 7kea/1/1:C/1:A 7keb/1/1:B/1:A 7keb/1/1:C/1:A 7kec/1/1:B/1:A 7kec/1/1:C/1:A 7kj2/1/1:A/1:B 7kj2/1/1:C/1:A 7kj5/1/1:A/1:B 7kj5/1/1:C/1:A 7p78/1/1:A/1:C 7p78/1/1:A/1:E 7p79/1/1:A/1:C 7p79/1/1:A/1:E 8gb0/1/1:B/1:A 8gb0/1/1:C/1:A |
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