7dod/1/9:A/9:B |
| >7dod-a1-m9-cA (length=513) [Search sequence] |
PEQPNGPAQRLEMAVATGAIQSNVPEAIRNCFAVYRTFAWNDRMPAGTFLGSVSLHPNIN
PYTSHLSGMWAGWGGSFESRVSISGSGVFAGRVVASVIPPGVDPSSIRDPGVLPHAFVDA
RITEPVSFMIPDVRNTDYHRMDGNEPTCSLGLWVYQPLINPFSTSAVSTCWVSIETKPGG
DFDFCLLKPPGQRMENGVSPEGLLPRRLGYARGNRVGGLVVGLVLVADHHQVNRHFNANS
ITYGWSTAPVNPMAAEIVVKHDYTNNRNAWLSIGAKNKGPLFPGLPNHFPDSCASTLVGA
MDTGRHMPATGVCGPAIGFQDNGDVFENETPAVMFATFNPLTGNPIALYDSINPASLAVM
CTKSNSNFDSSGFANDKNVVVQMSWEMYTNSQQIQGRVTPMQGTNFVFTSSGANTLALWE
ERLLSYDGHQAILYSSQMERTSEYFQNDNVNIPPGSMAVFNVETNSASFQIGIREDGYMV
TGGTIGTHVVLDPETRFQYVGLLPLTAALAGPN |
| >7dod-a1-m9-cB (length=530) [Search sequence] |
DPPGATGPTTSHVVVSNPEQPNGPAQRLEMAVATGAIQSNVPEAIRNCFAVYRTFAWNDR
MPAGTFLGSVSLHPNINPYTSHLSGMWAGWGGSFESRVSISGSGVFAGRVVASVIPPGVD
PSSIRDPGVLPHAFVDARITEPVSFMIPDVRNTDYHRMDGNEPTCSLGLWVYQPLINPFS
TSAVSTCWVSIETKPGGDFDFCLLKPPGQRMENGVSPEGLLPRRLGYARGNRVGGLVVGL
VLVADHHQVNRHFNANSITYGWSTAPVNPMAAEIVVKHDYTNNRNAWLSIGAKNKGPLFP
GLPNHFPDSCASTLVGAMDTGRHMPATGVCGPAIGFQDNGDVFENETPAVMFATFNPLTG
NPIALYDSINPASLAVMCTKSNSNFDSSGFANDKNVVVQMSWEMYTNSQQIQGRVTPMQG
TNFVFTSSGANTLALWEERLLSYDGHQAILYSSQMERTSEYFQNDNVNIPPGSMAVFNVE
TNSASFQIGIREDGYMVTGGTIGTHVVLDPETRFQYVGLLPLTAALAGPN |
|
| PDB ID |
7dod (database links:
RCSB PDB
PDBe
PDBj
PDBsum) |
| Title |
Capsid structure of human sapovirus |
| Assembly ID |
1 |
| Resolution |
2.9Å |
| Method of structure determination |
ELECTRON MICROSCOPY |
| Number of inter-chain contacts |
120 |
| Sequence identity between the two chains |
1.0 |
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|
Chain 1 |
Chain 2 |
| Model ID |
9 |
9 |
| Chain ID |
A |
B |
| UniProt accession |
A0A2Z6DUV0 |
A0A2Z6DUV0 |
| Species |
2169442 (Sapovirus Hu/GI.6/Nichinan/FP05284/2005/JPN) |
2169442 (Sapovirus Hu/GI.6/Nichinan/FP05284/2005/JPN) |
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Switch viewer: [NGL] [JSmol]
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Dimer structure:
Chain 1 in red;
Chain 2 in blue.
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Full biological assembly
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| Other dimers with similar sequences and structures |
7dod/1/10:A/10:B 7dod/1/10:C/5:C 7dod/1/11:A/11:B 7dod/1/11:C/37:C 7dod/1/12:A/12:B 7dod/1/12:C/46:C 7dod/1/13:A/13:B 7dod/1/13:C/44:C 7dod/1/14:A/14:B 7dod/1/14:C/28:C 7dod/1/15:A/15:B 7dod/1/15:C/20:C 7dod/1/16:A/16:B 7dod/1/16:C/27:C 7dod/1/17:A/17:B 7dod/1/17:C/51:C 7dod/1/18:A/18:B 7dod/1/18:C/59:C 7dod/1/19:A/19:B 7dod/1/19:C/38:C 7dod/1/1:A/1:B 7dod/1/1:C/22:C 7dod/1/20:A/20:B 7dod/1/21:A/21:B 7dod/1/21:C/42:C 7dod/1/22:A/22:B 7dod/1/23:A/23:B 7dod/1/23:C/9:C 7dod/1/24:A/24:B 7dod/1/24:C/53:C 7dod/1/25:A/25:B 7dod/1/25:C/30:C 7dod/1/26:A/26:B 7dod/1/26:C/52:C 7dod/1/27:A/27:B 7dod/1/28:A/28:B 7dod/1/29:A/29:B 7dod/1/29:C/43:C 7dod/1/2:A/2:B 7dod/1/2:C/41:C 7dod/1/30:A/30:B 7dod/1/31:A/31:B 7dod/1/31:C/57:C 7dod/1/32:A/32:B 7dod/1/32:C/6:C 7dod/1/33:A/33:B 7dod/1/33:C/4:C 7dod/1/34:A/34:B 7dod/1/34:C/48:C 7dod/1/35:A/35:B 7dod/1/35:C/40:C 7dod/1/36:A/36:B 7dod/1/36:C/47:C 7dod/1/37:A/37:B 7dod/1/38:A/38:B 7dod/1/39:A/39:B 7dod/1/39:C/58:C 7dod/1/3:A/3:B 7dod/1/3:C/49:C 7dod/1/40:A/40:B 7dod/1/41:A/41:B 7dod/1/42:A/42:B 7dod/1/43:A/43:B 7dod/1/44:A/44:B 7dod/1/45:A/45:B 7dod/1/45:C/50:C 7dod/1/46:A/46:B 7dod/1/47:A/47:B 7dod/1/48:A/48:B 7dod/1/49:A/49:B 7dod/1/4:A/4:B 7dod/1/50:A/50:B 7dod/1/51:A/51:B 7dod/1/52:A/52:B 7dod/1/53:A/53:B 7dod/1/54:A/54:B 7dod/1/54:C/8:C 7dod/1/55:A/55:B 7dod/1/55:C/60:C 7dod/1/56:A/56:B 7dod/1/56:C/7:C 7dod/1/57:A/57:B 7dod/1/58:A/58:B 7dod/1/59:A/59:B 7dod/1/5:A/5:B 7dod/1/60:A/60:B 7dod/1/6:A/6:B 7dod/1/7:A/7:B 7dod/1/8:A/8:B |
| Other dimers with similar sequences but different poses |
7dod/1/10:B/9:C 7dod/1/10:A/10:C 7dod/1/10:A/6:B 7dod/1/10:C/6:B 7dod/1/11:A/11:C 7dod/1/11:A/12:B 7dod/1/11:B/15:C 7dod/1/11:C/12:B 7dod/1/12:A/12:C 7dod/1/12:A/13:B 7dod/1/12:C/13:B 7dod/1/13:A/13:C 7dod/1/13:A/14:B 7dod/1/13:C/14:B 7dod/1/14:A/14:C 7dod/1/14:A/15:B 7dod/1/14:C/15:B 7dod/1/15:A/11:B 7dod/1/15:A/15:C 7dod/1/16:A/16:C 7dod/1/16:A/17:B 7dod/1/16:B/20:C 7dod/1/16:C/17:B 7dod/1/17:A/17:C 7dod/1/17:A/18:B 7dod/1/17:C/18:B 7dod/1/18:A/18:C 7dod/1/18:A/19:B 7dod/1/18:C/19:B 7dod/1/19:A/19:C 7dod/1/19:A/20:B 7dod/1/19:C/20:B 7dod/1/1:A/1:C 7dod/1/1:A/2:B 7dod/1/1:B/5:C 7dod/1/1:C/2:B 7dod/1/20:A/16:B 7dod/1/20:A/20:C 7dod/1/21:A/21:C 7dod/1/21:A/22:B 7dod/1/21:B/25:C 7dod/1/21:C/22:B 7dod/1/22:A/22:C 7dod/1/22:A/23:B 7dod/1/22:C/23:B 7dod/1/23:A/23:C 7dod/1/23:A/24:B 7dod/1/23:C/24:B 7dod/1/24:A/24:C 7dod/1/24:A/25:B 7dod/1/24:C/25:B 7dod/1/25:A/21:B 7dod/1/25:A/25:C 7dod/1/26:A/26:C 7dod/1/26:A/27:B 7dod/1/26:B/30:C 7dod/1/26:C/27:B 7dod/1/27:A/27:C 7dod/1/27:A/28:B 7dod/1/27:C/28:B 7dod/1/28:A/28:C 7dod/1/28:A/29:B 7dod/1/28:C/29:B 7dod/1/29:A/29:C 7dod/1/29:A/30:B 7dod/1/29:C/30:B 7dod/1/2:A/2:C 7dod/1/2:A/3:B 7dod/1/2:C/3:B 7dod/1/30:A/26:B 7dod/1/30:A/30:C 7dod/1/31:A/31:C 7dod/1/31:A/32:B 7dod/1/31:B/35:C 7dod/1/31:C/32:B 7dod/1/32:A/32:C 7dod/1/32:A/33:B 7dod/1/32:C/33:B 7dod/1/33:A/33:C 7dod/1/33:A/34:B 7dod/1/33:C/34:B 7dod/1/34:A/34:C 7dod/1/34:A/35:B 7dod/1/34:C/35:B 7dod/1/35:A/31:B 7dod/1/35:A/35:C 7dod/1/36:A/36:C 7dod/1/36:A/37:B 7dod/1/36:B/40:C 7dod/1/36:C/37:B 7dod/1/37:A/37:C 7dod/1/37:A/38:B 7dod/1/37:C/38:B 7dod/1/38:A/38:C 7dod/1/38:A/39:B 7dod/1/38:C/39:B 7dod/1/39:A/39:C 7dod/1/39:A/40:B 7dod/1/39:C/40:B 7dod/1/3:A/3:C 7dod/1/3:A/4:B 7dod/1/3:C/4:B 7dod/1/40:A/36:B 7dod/1/40:A/40:C 7dod/1/41:A/41:C 7dod/1/41:A/42:B 7dod/1/41:B/45:C 7dod/1/41:C/42:B 7dod/1/42:A/42:C 7dod/1/42:A/43:B 7dod/1/42:C/43:B 7dod/1/43:A/43:C 7dod/1/43:A/44:B 7dod/1/43:C/44:B 7dod/1/44:A/44:C 7dod/1/44:A/45:B 7dod/1/44:C/45:B 7dod/1/45:A/41:B 7dod/1/45:A/45:C 7dod/1/46:A/46:C 7dod/1/46:A/47:B 7dod/1/46:B/50:C 7dod/1/46:C/47:B 7dod/1/47:A/47:C 7dod/1/47:A/48:B 7dod/1/47:C/48:B 7dod/1/48:A/48:C 7dod/1/48:A/49:B 7dod/1/48:C/49:B 7dod/1/49:A/49:C 7dod/1/49:A/50:B 7dod/1/49:C/50:B 7dod/1/4:A/4:C 7dod/1/4:A/5:B 7dod/1/4:C/5:B 7dod/1/50:A/46:B 7dod/1/50:A/50:C 7dod/1/51:A/51:C 7dod/1/51:A/52:B 7dod/1/51:B/55:C 7dod/1/51:C/52:B 7dod/1/52:A/52:C 7dod/1/52:A/53:B 7dod/1/52:C/53:B 7dod/1/53:A/53:C 7dod/1/53:A/54:B 7dod/1/53:C/54:B 7dod/1/54:A/54:C 7dod/1/54:A/55:B 7dod/1/54:C/55:B 7dod/1/55:A/51:B 7dod/1/55:A/55:C 7dod/1/56:A/56:C 7dod/1/56:A/57:B 7dod/1/56:B/60:C 7dod/1/56:C/57:B 7dod/1/57:A/57:C 7dod/1/57:A/58:B 7dod/1/57:C/58:B 7dod/1/58:A/58:C 7dod/1/58:A/59:B 7dod/1/58:C/59:B 7dod/1/59:A/59:C 7dod/1/59:A/60:B 7dod/1/59:C/60:B 7dod/1/5:A/1:B 7dod/1/5:A/5:C 7dod/1/60:A/56:B 7dod/1/60:A/60:C 7dod/1/6:A/6:C 7dod/1/6:A/7:B 7dod/1/6:C/7:B 7dod/1/7:A/7:C 7dod/1/7:A/8:B 7dod/1/7:C/8:B 7dod/1/8:A/8:C 7dod/1/8:A/9:B 7dod/1/8:C/9:B 7dod/1/9:A/10:B 7dod/1/9:A/9:C
7dod/1/9:B/9:C 7dod/1/10:A/6:A 7dod/1/10:A/9:A 7dod/1/10:B/10:C 7dod/1/10:B/23:C 7dod/1/11:A/12:A 7dod/1/11:A/15:A 7dod/1/11:B/11:C 7dod/1/11:B/20:C 7dod/1/11:C/38:B 7dod/1/12:A/13:A 7dod/1/12:B/12:C 7dod/1/12:B/37:C 7dod/1/12:C/47:B 7dod/1/13:A/14:A 7dod/1/13:B/13:C 7dod/1/13:B/46:C 7dod/1/13:C/45:B 7dod/1/14:A/15:A 7dod/1/14:B/14:C 7dod/1/14:B/44:C 7dod/1/14:C/29:B 7dod/1/15:B/15:C 7dod/1/15:B/28:C 7dod/1/15:C/16:B 7dod/1/16:A/17:A 7dod/1/16:A/20:A 7dod/1/16:B/16:C 7dod/1/16:C/28:B 7dod/1/17:A/18:A 7dod/1/17:B/17:C 7dod/1/17:B/27:C 7dod/1/17:C/52:B 7dod/1/18:A/19:A 7dod/1/18:B/18:C 7dod/1/18:B/51:C 7dod/1/18:C/60:B 7dod/1/19:A/20:A 7dod/1/19:B/19:C 7dod/1/19:B/59:C 7dod/1/19:C/39:B 7dod/1/1:A/2:A 7dod/1/1:A/5:A 7dod/1/1:B/10:C 7dod/1/1:B/1:C 7dod/1/1:C/23:B 7dod/1/20:B/20:C 7dod/1/20:B/38:C 7dod/1/21:A/22:A 7dod/1/21:A/25:A 7dod/1/21:B/21:C 7dod/1/21:B/30:C 7dod/1/21:C/43:B 7dod/1/22:A/23:A 7dod/1/22:B/22:C 7dod/1/22:B/42:C 7dod/1/23:A/24:A 7dod/1/23:B/23:C 7dod/1/24:A/25:A 7dod/1/24:B/24:C 7dod/1/24:B/9:C 7dod/1/24:C/54:B 7dod/1/25:B/25:C 7dod/1/25:B/53:C 7dod/1/25:C/26:B 7dod/1/26:A/27:A 7dod/1/26:A/30:A 7dod/1/26:B/26:C 7dod/1/26:C/53:B 7dod/1/27:A/28:A 7dod/1/27:B/27:C 7dod/1/27:B/52:C 7dod/1/28:A/29:A 7dod/1/28:B/28:C 7dod/1/29:A/30:A 7dod/1/29:B/29:C 7dod/1/29:C/44:B 7dod/1/2:A/3:A 7dod/1/2:B/22:C 7dod/1/2:B/2:C 7dod/1/2:C/42:B 7dod/1/30:B/30:C 7dod/1/30:B/43:C 7dod/1/31:A/32:A 7dod/1/31:A/35:A 7dod/1/31:B/31:C 7dod/1/31:B/40:C 7dod/1/31:C/58:B 7dod/1/32:A/33:A 7dod/1/32:B/32:C 7dod/1/32:B/57:C 7dod/1/32:C/7:B 7dod/1/33:A/34:A 7dod/1/33:B/33:C 7dod/1/33:B/6:C 7dod/1/33:C/5:B 7dod/1/34:A/35:A 7dod/1/34:B/34:C 7dod/1/34:B/4:C 7dod/1/34:C/49:B 7dod/1/35:B/35:C 7dod/1/35:B/48:C 7dod/1/35:C/36:B 7dod/1/36:A/37:A 7dod/1/36:A/40:A 7dod/1/36:B/36:C 7dod/1/36:C/48:B 7dod/1/37:A/38:A 7dod/1/37:B/37:C 7dod/1/37:B/47:C 7dod/1/38:A/39:A 7dod/1/38:B/38:C 7dod/1/39:A/40:A 7dod/1/39:B/39:C 7dod/1/39:C/59:B 7dod/1/3:A/4:A 7dod/1/3:B/3:C 7dod/1/3:B/41:C 7dod/1/3:C/50:B 7dod/1/40:B/40:C 7dod/1/40:B/58:C 7dod/1/41:A/42:A 7dod/1/41:A/45:A 7dod/1/41:B/41:C 7dod/1/41:B/50:C 7dod/1/42:A/43:A 7dod/1/42:B/42:C 7dod/1/43:A/44:A 7dod/1/43:B/43:C 7dod/1/44:A/45:A 7dod/1/44:B/44:C 7dod/1/45:B/45:C 7dod/1/45:C/46:B 7dod/1/46:A/47:A 7dod/1/46:A/50:A 7dod/1/46:B/46:C 7dod/1/47:A/48:A 7dod/1/47:B/47:C 7dod/1/48:A/49:A 7dod/1/48:B/48:C 7dod/1/49:A/50:A 7dod/1/49:B/49:C 7dod/1/4:A/5:A 7dod/1/4:B/49:C 7dod/1/4:B/4:C 7dod/1/50:B/50:C 7dod/1/51:A/52:A 7dod/1/51:A/55:A 7dod/1/51:B/51:C 7dod/1/51:B/60:C 7dod/1/52:A/53:A 7dod/1/52:B/52:C 7dod/1/53:A/54:A 7dod/1/53:B/53:C 7dod/1/54:A/55:A 7dod/1/54:B/54:C 7dod/1/54:C/9:B 7dod/1/55:B/55:C 7dod/1/55:B/8:C 7dod/1/55:C/56:B 7dod/1/56:A/57:A 7dod/1/56:A/60:A 7dod/1/56:B/56:C 7dod/1/56:C/8:B 7dod/1/57:A/58:A 7dod/1/57:B/57:C 7dod/1/57:B/7:C 7dod/1/58:A/59:A 7dod/1/58:B/58:C 7dod/1/59:A/60:A 7dod/1/59:B/59:C 7dod/1/5:B/5:C 7dod/1/5:C/6:B 7dod/1/60:B/60:C 7dod/1/6:A/7:A 7dod/1/6:B/6:C 7dod/1/7:A/8:A 7dod/1/7:B/7:C 7dod/1/8:A/9:A 7dod/1/8:B/8:C |
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