7thk/1/1:A/1:B

Sequences

>7thk-a1-m1-cA (length=860) [Search sequence]

PAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVIRFDNPVLPFNDGVYFAS IEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDHMESEFRVYSSA NNCTFEYVSQPFLFKNLREFVFKNIDGYFKIYSKHTPIIVREPEDLPQGFSALEPLVDLP IGINITRFQTLLALHAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLK SFTVEKGIYQTSNFRVQPTESIVRFSTNLVKNKCVNFNFNGLKGTGVLTESNKKFLPFQQ FGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAI HADQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQTQSQSIIAY TMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQ YGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPDPSKSKRS FIEDLLFNKVTLYGDCLGDIAARDLICAQKFKGLTVLPPLLTDEMIAQYTSALLAGTITS GWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSALGK LQDVVNHNAQALNTLVKQLSSKFGAISSVLNDIFSRLDPPEAEVQIDRLITGRLQSLQTY VTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTY VPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCD VVIGIVNNTVYDPLQPELDS

>7thk-a1-m1-cB (length=1043) [Search sequence]

PAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVIRFDNPVLPFNDGVYFAS IEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDHMESEFRVYSSA NNCTFEYVSQPFLFKNLREFVFKNIDGYFKIYSKHTPIIVREPEDLPQGFSALEPLVDLP IGINITRFQTLLALHAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLK SFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFDEVFNATRFASVYAWNRKRISNCVAD YSVLYNLFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLP DDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGF NCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGL KGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSN QVAVLYQGVNCTEVPVAQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGAGI CASYQTQSQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMY ICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFN FSQILPDPSKSKRSFIEDLLFNKVTDLICAQKFKGLTVLPPLLTDEMIAQYTSALLAGTI TSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTA LGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDIFSRLDPPEAEVQIDRLITGRLQSL QTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLH VTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSG NCDVVIGIVNNTVYDPLQPELDS

Structure information

PDB ID	7thk (database links: RCSB PDB PDBe PDBj PDBsum)
Title	Cryo-EM structure of prefusion SARS-CoV-2 spike omicron B.1.1.529 variant
Assembly ID	1
Resolution	3.11Å
Method of structure determination	ELECTRON MICROSCOPY
Number of inter-chain contacts	383
Sequence identity between the two chains	0.981

Chain information

	Chain 1	Chain 2
Model ID	1	1
Chain ID	A	B
UniProt accession	P0DTC2	P0DTC2
Species	2697049 (Severe acute respiratory syndrome coronavirus 2)	2697049 (Severe acute respiratory syndrome coronavirus 2)

3D structure

Dimer structure: Chain 1 in red; Chain 2 in blue. Color: [By chain]   [By residue index]   Spin: [Spin off]   [Spin on]   [Reset] Render: [Low quality]   [High quality]   Background: [Black]   [White]   Download: 7thk-a1-m1-cA_7thk-a1-m1-cB.pdb.gz

Full biological assembly Color: [By chain]   [By residue index]   Spin: [Spin off]   [Spin on]   [Reset] Render: [Low quality]   [High quality]   Background: [Black quality]   [White quality]   Download: 7thk-assembly1.cif.gz