8dej/1/1:J/1:I

Sequences
>8dej-a1-m1-cJ (length=117) [Search sequence]
VSLDPARTDRPYLLGRLFAVLEKAQEDAVPGANATIKDRYLASASANPGQVFHMLLKNAS
NHTAKLRKDPERKAIHYEIMMQEIIDNISDFPVTMSSDEQGLFMIGYYHQRKALFTK
>8dej-a1-m1-cI (length=535) [Search sequence]
LQALHGYYQRMSADPDAGMPPYGTSMENISFALVLDAKGTLRGIEDLREQEGKKLRPRKM
LVPIAEKKGNGIKPNFLWENTSYILGVDAKGKQERTDKCHAAFIAHIKAADQDLAAVLQF
LEHGSEEVIGSNIVFRIEGEPGFVHERPAARQAWANCLNRREQGLCGQCLITGERQKPIA
QLHPSIKGGRDGVRGAQAVASIVSFNNTAFESYGKEQSINAPVSQEAAFSYVTALNYLLN
PSNRQKVTIADATVVFWAERSSPAEDIFAGMFDPPESVRFHVLGLSPNAARLSVRFWEVD
TVGHMLDKVGRHYRELEIIPQFNNEQEFPSLSTLLRQTAVLNKTENISPVLAGGLFRAML
TGGPYPQSLLPAVLGRIRAEHARPEDKSRYRLEVVTYYRAALIKAYLIRNRKLEVPVSLD
PARTDRPYLLGRLFAVLEKAQEDAVPGANATIKDRYLASASANPGQVFHMLLKNASNHTA
KLRKDPERKSAIHYEIMMQEIIDNISDFPVTMSSDEQGLFMIGYYHQRKALFTKK
Structure information
PDB ID 8dej (database links: RCSB PDB PDBe PDBj PDBsum)
Title D. vulgaris type I-C Cascade bound to dsDNA target
Assembly ID 1
Resolution 2.86Å
Method of structure determination ELECTRON MICROSCOPY
Number of inter-chain contacts 50
Sequence identity between the two chains 1.0
PubMed citation 36805026
Chain information
Chain 1 Chain 2
Model ID 1 1
Chain ID J I
UniProt accession Q72WF8 Q72WF8
Species 882 (Desulfovibrio vulgaris str. Hildenborough) 882 (Desulfovibrio vulgaris str. Hildenborough)
Function annotation BioLiP:8dejJ BioLiP:8dejI
3D structure
Switch viewer: [NGL] [JSmol]
Dimer structure: Chain 1 in red; Chain 2 in blue.
Color: [By chain]   [By residue index]  
Spin: [Spin off]   [Spin on]   [Reset]
Render: [Low quality]   [High quality]  
Background: [Black]   [White]  
Download: 8dej-a1-m1-cJ_8dej-a1-m1-cI.pdb.gz
Full biological assembly
Color: [By chain]   [By residue index]  
Spin: [Spin off]   [Spin on]   [Reset]
Render: [Low quality]   [High quality]  
Background: [Black quality]   [White quality]  
Download: 8dej-assembly1.cif.gz
Similar dimers
Other dimers with similar sequences and structures 8dej/1/1:J/1:K 8dex/1/1:J/1:K 8dfo/1/1:J/1:K 8dfs/1/1:J/1:K
Other dimers with similar sequences but different poses
  • 8dex/1/1:J/1:I 8dfa/1/1:J/1:I 8dfa/1/1:J/1:K 8dfo/1/1:J/1:I 8dfs/1/1:J/1:I
    		•

    [Back to Home]