8dek/1/1:A/1:B |
| >8dek-a1-m1-cA (length=440) [Search sequence] |
GAEFTRLPVSWTVNPRDAANARAAWKTLSAYHRGKPKSSRKLHVVYVTFKDRPALEGYRE
RYDHILKNIQAYYADQMQANGFPPLTFQLDLDERGKLVIHDAYVDKPMSEMSVQSSGPVS
REAARKVLASKGIDIEKEHVLVVCQLPDGVGPYYGGGFSHQGTGWTCDQEGLDPASFLDT
EMMQGGRFKVTRGKNATIYIGGTAHELGHSFGLPHTGDGWNYPDAGASLMGHGNSTYGDE
LRHEGKGAYLAPTDALKLASVPLFNGVETELPADASFGRMLGKYVPGSFERLEAIPVKDG
LRLKGRVHLTRPAYGIVAHLDPPGGSDYDSNAVGASLDEKGEFDLTICRPGYKGGFIEMR
VAVLNCDSTRSMITLPVWMDARGTKAPSLAQIVYFGDVQNLWIRGRTEEARKALAEVERR
HGSRSEVKEWLPVWKRALGR |
| >8dek-a1-m1-cB (length=441) [Search sequence] |
RGAEFTRLPVSWTVNPRDAANARAAWKTLSAYHRGKPKSSRKLHVVYVTFKDRPALEGYR
ERYDHILKNIQAYYADQMQANGFPPLTFQLDLDERGKLVIHDAYVDKPMSEMSVQSSGPV
SREAARKVLASKGIDIEKEHVLVVCQLPDGVGPYYGGGFSHQGTGWTCDQEGLDPASFLD
TEMMQGGRFKVTRGKNATIYIGGTAHELGHSFGLPHTGDGWNYPDAGASLMGHGNSTYGD
ELRHEGKGAYLAPTDALKLASVPLFNGVETELPADASFGRMLGKYVPGSFERLEAIPVKD
GLRLKGRVHLTRPAYGIVAHLDPPGGSDYDSNAVGASLDEKGEFDLTICRPGYKGGFIEM
RVAVLNCDSTRSMITLPVWMDARGTKAPSLAQIVYFGDVQNLWIRGRTEEARKALAEVER
RHGSRSEVKEWLPVWKRALGR |
|
| PDB ID |
8dek (database links:
RCSB PDB
PDBe
PDBj
PDBsum) |
| Title |
The structure of the glycopeptidase catalytic domain including the linker of Amuc_1438 |
| Assembly ID |
1 |
| Resolution |
2.5Å |
| Method of structure determination |
X-RAY DIFFRACTION |
| Number of inter-chain contacts |
76 |
| Sequence identity between the two chains |
1.0 |
| PubMed citation |
36049519 |
|
|
Chain 1 |
Chain 2 |
| Model ID |
1 |
1 |
| Chain ID |
A |
B |
| UniProt accession |
B2UKY7 |
B2UKY7 |
| Species |
239935 (Akkermansia muciniphila) |
239935 (Akkermansia muciniphila) |
| Function annotation |
BioLiP:8dekA |
BioLiP:8dekB |
|
Switch viewer: [NGL] [JSmol]
|
Dimer structure:
Chain 1 in red;
Chain 2 in blue.
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Full biological assembly
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