8dgc/1/1:D/1:C

Sequences

>8dgc-a1-m1-cD (length=2004) [Search sequence]

QFHYLWAARRALRLLEPQSTLVALTIEGASDGEELIDIAEYYGSNELATATTVRYMQLKH STMHSDTPFPPSGLQKTIEGFATRYKALIQKIPVETLRTKLEFWFVTNRPVSSSFSEAIN DAANQHVTRHPHDLAKLEKFTGLQGAELSIFCQLLHIEGQQDDLWSQRNILLRESAGYLP DLDTEAPLKLKELVNRKALTESAANPSITRMDVLRALGVDETDLFPAPCRIERIENSVSR TQEATLVQRVVEAFGAPVIIHADAGVGKSIFSTHIEEHLPTGSVSILYDCFGLGQYRNAS SYRHHHRTALVQMANEMASRGLCHPLIPNAGTGISQYMRAFLHRLSQSISILRASEPLAV LCIIIDAADNAQMAAEEIGETRSFIKDLIREKLPDGVCLVALCRPYRRELLDPPPEALTL SLQTFNRDETAAHLHQKFPDASESDVDEFHRLSSCNPRVQALSLSQNLPLNDTLRLLGPN PKTVEDTIGEVLEKSIARLRDTAGISERAQIDTICSALAILRPLIPLSVLSAISGVAGSA IKSFALDLGRPLIVSGETIQFFDEPAETWFQRRFRPSAADLHQFITKLRPLTKDSSYAAS VLPALMLEGNQLSELIELAISSQALPETSAVERRDIELQRLQFALKAALRTGRYQDAAKL ALKAGGECAGDNRQRVLLRDNIDLAAKFVGSNGVQELVSRNAFPDTGWPGSRNAYYAAIL SEYPELSGEARSRLRLTMEWLTNWSQLPDDERSRQNVTDQDRAVMLIACLNIHGAEAAAR ELRRWRPRKLSFDAGKIVAMQLLAHARYDELDQLAIAAGNDISLVMGIVLEARKLHRPVA EQAIRRTWRLLKSQRVSIKDRNHANNQTIAAITGMVEMALIQSVCTESESIQLLDRYLPK VPPYALTSEYSKERVAYVRAYALQANLMGSQLALSDLASTEVKKELMAEKRHGESDDLRQ LKQYSGVLIPWYNLWAKVILGKTRKADLESELSDTQKESTAIKGHSYSEHSLSSNEIANV WFDILIEAGNVSKDDVENIIKWSQHKGNRVFTPTLHRFSSVCAEISGLGELSYHFAELAL SLWRDEHSDAQIKADGYIDLSRSLISLDEPEAKEYFNQAIEVTNKLGDENLSRWEAILDL AEYVAGKTQVPPEISYKLARCAELTREYVDRDKHFAWSDTVEILAELCPSSALAIISRWR DRTFGNHRSILAWTIEHLVKKNKINALDALPLITFENDWHKCDLLDSVLSSCTDDKDKIM AFEVVYHYTKFNVQNIQNLKKLDAISTSLGIEHTELKERISGLQHGHDQEWESIFKDCDL SSIDGISAAYEKFRNVPEFYSKETFIKKAISRVKTGKECSFITAIGAIFHWGLYDFKYIL ESIPDEWTSRLSIKTTLAGLIKEYCQRFCMRIRKSRVYEIFPFSLASRLSGISEKEIFGI TLEAIAESPEPANSDRLFSLPGLLVSKLESNEALDVLSYALDLFDEVLKDEDGDGPWNEK LSPPTHVEDSLAGYIWARLGSPEAEMRWQAAHAVLALCRMSRTCVIQGIFQHAINATTLP FCDRNLPFYTLHAQLWLMIAAARVALDDGKSLIPNIGYFYHYATTDQPHVLIRHFAARTL LALHDSDLISIPAQEENKLRNINQSTTLPVEDSYTFGIDFGPYWLKPLGRCFGVSQKQLE PEMLRIIRDVLGFKGSRNWDEDERNKRRYYQDRDNHHSHGSYPRVDDYHFYLSYHAMFMT AGQLLATKPLVGEDVFQDWLRRHDISRNDHRWLADRRDIPPKERSSWLNSSSDNRDEWLA SISENVFNETLCPSPGLLTLWGRWSDVCSDRKESIIVHSALVSPERSLSLLRALQTTKNV YDYKIPDAQLKGWIKDIAEYCGIDEFDPWAGNVRFPIPEPASFIIDAMKLTTDKDHRVWY SPSDVEPAMISSIWGHLSGKNDEEKSHGYRLCASIHFIKSALETFNMDLILEVDVDRYSR NSSTRLFLFRHDGTIHTLYGNYRN

>8dgc-a1-m1-cC (length=2028) [Search sequence]

SDSLLVRTSRDGDQFHYLWAARRALRLLEPQSTLVALTIEGASTTEMGSQPVVEDGEELI DIAEYYGSNELATATTVRYMQLKHSTMHSDTPFPPSGLQKTIEGFATRYKALIQKIPVET LRTKLEFWFVTNRPVSSSFSEAINDAANQHVTRHPHDLAKLEKFTGLQGAELSIFCQLLH IEGQQDDLWSQRNILLRESAGYLPDLDTEAPLKLKELVNRKALTESAANPSITRMDVLRA LGVDETDLFPAPCRIERIENSVSRTQEATLVQRVVEAFGAPVIIHADAGVGKSIFSTHIE EHLPTGSVSILYDCFGLGQYRNASSYRHHHRTALVQMANEMASRGLCHPLIPNAGTGISQ YMRAFLHRLSQSISILRASEPLAVLCIIIDAADNAQMAAEEIGETRSFIKDLIREKLPDG VCLVALCRPYRRELLDPPPEALTLSLQTFNRDETAAHLHQKFPDASESDVDEFHRLSSCN PRVQALSLSQNLPLNDTLRLLGPNPKTVEDTIGEVLEKSIARLRDTAGISERAQIDTICS ALAILRPLIPLSVLSAISGVAGSAIKSFALDLGRPLIVSGETIQFFDEPAETWFQRRFRP SAADLHQFITKLRPLTKDSSYAASVLPALMLEGNQLSELIELAISSQALPETSAVERRDI ELQRLQFALKAALRTGRYQDAAKLALKAGGECAGDNRQRVLLRDNIDLAAKFVGSNGVQE LVSRNAFPDTGWPGSRNAYYAAILSEYPELSGEARSRLRLTMEWLTNWSQLPDDERSRQN VTDQDRAVMLIACLNIHGAEAAARELRRWRPRKLSFDAGKIVAMQLLAHARYDELDQLAI AAGNDISLVMGIVLEARKLHRPVAEQAIRRTWRLLKSQRVSIKDRNHANNQTIAAITGMV EMALIQSVCTESESIQLLDRYLPKVPPYALTSEYSKERVAYVRAYALQANLMGSQLALSD LASTEVKKELMAEKRHGESDDLRQLKQYSGVLIPWYNLWAKVILGKTRKADLESELSDTQ KESTAIKGHSYSEHSLSSNEIANVWFDILIEAGNVSKDDVENIIKWSQHKGNRVFTPTLH RFSSVCAEISGLGELSYHFAELALSLWRDEHSDAQIKADGYIDLSRSLISLDEPEAKEYF NQAIEVTNKLGDENLSRWEAILDLAEYVAGKTQVPPEISYKLARCAELTREYVDRDKHFA WSDTVEILAELCPSSALAIISRWRDRTFGNHRSILAWTIEHLVKKNKINALDALPLITFE NDWHKCDLLDSVLSSCTDDKDKIMAFEVVYHYTKFNVQNIQNLKKLDAISTSLGIEHTEL KERISGLQHGHDQEWESIFKDCDLSSIDGISAAYEKFRNVPEFYSKETFIKKAISRVKTG KECSFITAIGAIFHWGLYDFKYILESIPDEWTSRLSIKTTLAGLIKEYCQRFCMRIRKSR VYEIFPFSLASRLSGISEKEIFGITLEAIAESPEPANSDRLFSLPGLLVSKLESNEALDV LSYALDLFDEVLKDEDGDGPWNEKLSPPTHVEDSLAGYIWARLGSPEAEMRWQAAHAVLA LCRMSRTCVIQGIFQHAINATTLPFCDRNLPFYTLHAQLWLMIAAARVALDDGKSLIPNI GYFYHYATTDQPHVLIRHFAARTLLALHDSDLISIPAQEENKLRNINQSTTLPVEDSYTF GIDFGPYWLKPLGRCFGVSQKQLEPEMLRIIRDVLGFKGSRNWDEDERNKRRYYQDRDNH HSHGSYPRVDDYHFYLSYHAMFMTAGQLLATKPLVGEDVFQDWLRRHDISRNDHRWLADR RDIPPKERSSWLNSSSDNRDEWLASISENVFNETLCPSPGLLTLWGRWSDVCSDRKESII VHSALVSPERSLSLLRALQTTKNVYDYKIPDAQLKGWIKDIAEYCGIDEFDPWAGNVRFP IPEPASFIIDAMKLTTDKDHRVWYSPSDVEPAMISSIWGHLSGKNDEEKSHGYRLCASIH FIKSALETFNMDLILEVDVDRYSRNSSTRLFLFRHDGTIHTLYGNYRN

Structure information

PDB ID	8dgc (database links: RCSB PDB PDBe PDBj PDBsum)
Title	Avs3 bound to phage PhiV-1 terminase
Assembly ID	1
Resolution	3.4Å
Method of structure determination	ELECTRON MICROSCOPY
Number of inter-chain contacts	61
Sequence identity between the two chains	1.0
PubMed citation	35951700

Chain information

	Chain 1	Chain 2
Model ID	1	1
Chain ID	D	C
UniProt accession
Species	28901 (Salmonella enterica)	28901 (Salmonella enterica)
Function annotation	BioLiP:8dgcD	BioLiP:8dgcC

3D structure

Dimer structure: Chain 1 in red; Chain 2 in blue. Color: [By chain]   [By residue index]   Spin: [Spin off]   [Spin on]   [Reset] Render: [Low quality]   [High quality]   Background: [Black]   [White]   Download: 8dgc-a1-m1-cD_8dgc-a1-m1-cC.pdb.gz

Full biological assembly Color: [By chain]   [By residue index]   Spin: [Spin off]   [Spin on]   [Reset] Render: [Low quality]   [High quality]   Background: [Black quality]   [White quality]   Download: 8dgc-assembly1.cif.gz

Similar dimers

Other dimers with similar sequences and structures

8dgc/1/1:B/1:A 8dgc/1/1:B/1:C 8dgc/1/1:D/1:A