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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
AAAAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVS
VPYAMNLLNGIKLYGRPIKIQFR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5iqq-a1-m1-cC 83 83 1.0000 1.0000 1.0000 7.70e-57 5iqq-a1-m1-cD_5iqq-a1-m1-cC
2 5iqq-a1-m1-cD 81 81 0.9759 1.0000 1.0000 1.79e-55 5iqq-a1-m1-cD_5iqq-a1-m1-cC
3 6r5k-a1-m1-cD 390 77 0.4096 0.0872 0.4416 1.33e-10 6r5k-a1-m1-cD_6r5k-a1-m1-cH
4 6r5k-a1-m1-cD 390 72 0.2892 0.0615 0.3333 4.94e-09 6r5k-a1-m1-cD_6r5k-a1-m1-cH
5 6r5k-a1-m1-cD 390 75 0.2771 0.0590 0.3067 7.74e-06 6r5k-a1-m1-cD_6r5k-a1-m1-cH
6 6r5k-a1-m1-cD 390 72 0.2771 0.0590 0.3194 9.49e-05 6r5k-a1-m1-cD_6r5k-a1-m1-cH
7 6r5k-a1-m1-cH 394 77 0.4096 0.0863 0.4416 1.48e-10 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
8 6r5k-a1-m1-cH 394 72 0.2892 0.0609 0.3333 5.46e-09 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
9 6r5k-a1-m1-cH 394 75 0.2771 0.0584 0.3067 8.97e-06 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
10 6r5k-a1-m1-cH 394 72 0.2771 0.0584 0.3194 1.08e-04 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
11 3md3-a2-m2-cA 165 75 0.3133 0.1576 0.3467 7.83e-10 3md3-a2-m1-cA_3md3-a2-m2-cA
12 3md3-a2-m2-cA 165 82 0.2892 0.1455 0.2927 8.07e-06 3md3-a2-m1-cA_3md3-a2-m2-cA
13 3md3-a2-m1-cA 165 75 0.3133 0.1576 0.3467 7.83e-10 3md3-a2-m1-cA_3md3-a2-m2-cA
14 3md3-a2-m1-cA 165 82 0.2892 0.1455 0.2927 8.07e-06 3md3-a2-m1-cA_3md3-a2-m2-cA
15 6r5k-a1-m1-cF 165 72 0.2892 0.1455 0.3333 1.88e-09 6r5k-a1-m1-cF_6r5k-a1-m1-cH
16 6r5k-a1-m1-cF 165 75 0.2771 0.1394 0.3067 3.54e-06 6r5k-a1-m1-cF_6r5k-a1-m1-cH
17 3b4d-a1-m2-cA 80 74 0.3373 0.3500 0.3784 1.13e-08 3b4d-a1-m1-cA_3b4d-a1-m2-cA
18 3b4d-a1-m1-cA 80 74 0.3373 0.3500 0.3784 1.13e-08 3b4d-a1-m1-cA_3b4d-a1-m2-cA
19 3md1-a4-m5-cB 79 75 0.2651 0.2785 0.2933 1.15e-06 3md1-a4-m4-cB_3md1-a4-m5-cB
20 3md1-a4-m4-cB 79 75 0.2651 0.2785 0.2933 1.15e-06 3md1-a4-m4-cB_3md1-a4-m5-cB
21 5ifn-a1-m1-cB 252 73 0.3133 0.1032 0.3562 3.73e-06 5ifn-a1-m1-cB_5ifn-a1-m1-cA
22 5ifn-a1-m1-cB 252 46 0.2289 0.0754 0.4130 0.11 5ifn-a1-m1-cB_5ifn-a1-m1-cA
23 5ifn-a1-m1-cA 257 73 0.3133 0.1012 0.3562 3.96e-06 5ifn-a1-m1-cB_5ifn-a1-m1-cA
24 5ifn-a1-m1-cA 257 46 0.2289 0.0739 0.4130 0.11 5ifn-a1-m1-cB_5ifn-a1-m1-cA
25 6gc5-a1-m1-cB 76 75 0.2651 0.2895 0.2933 9.47e-06 6gc5-a1-m1-cB_6gc5-a1-m1-cA
26 6gc5-a1-m1-cA 79 76 0.2651 0.2785 0.2895 1.30e-05 6gc5-a1-m1-cB_6gc5-a1-m1-cA
27 6gd1-a1-m1-cA 190 82 0.2771 0.1211 0.2805 3.77e-05 6gd1-a1-m1-cB_6gd1-a1-m1-cA
28 6gd1-a1-m1-cB 187 76 0.2651 0.1176 0.2895 5.39e-05 6gd1-a1-m1-cB_6gd1-a1-m1-cA
29 5ifm-a1-m1-cA 254 73 0.2892 0.0945 0.3288 1.98e-04 5ifm-a1-m1-cA_5ifm-a1-m1-cB
30 5ifm-a1-m1-cA 254 77 0.2410 0.0787 0.2597 1.5 5ifm-a1-m1-cA_5ifm-a1-m1-cB
31 5ifm-a1-m1-cB 259 73 0.2892 0.0927 0.3288 2.31e-04 5ifm-a1-m1-cA_5ifm-a1-m1-cB
32 5ifm-a1-m1-cB 259 77 0.2410 0.0772 0.2597 1.7 5ifm-a1-m1-cA_5ifm-a1-m1-cB
33 3val-a1-m1-cI 172 85 0.3133 0.1512 0.3059 2.66e-04 3val-a1-m1-cI_3val-a1-m1-cA
34 3val-a1-m1-cI 172 73 0.2410 0.1163 0.2740 0.12 3val-a1-m1-cI_3val-a1-m1-cA
35 2g4b-a1-m2-cA 172 85 0.3133 0.1512 0.3059 2.66e-04 2g4b-a1-m1-cA_2g4b-a1-m2-cA
36 2g4b-a1-m2-cA 172 73 0.2410 0.1163 0.2740 0.12 2g4b-a1-m1-cA_2g4b-a1-m2-cA
37 2g4b-a1-m1-cA 172 85 0.3133 0.1512 0.3059 2.66e-04 2g4b-a1-m1-cA_2g4b-a1-m2-cA
38 2g4b-a1-m1-cA 172 73 0.2410 0.1163 0.2740 0.12 2g4b-a1-m1-cA_2g4b-a1-m2-cA
39 3val-a1-m1-cA 174 85 0.3133 0.1494 0.3059 2.72e-04 3val-a1-m1-cI_3val-a1-m1-cA
40 3val-a1-m1-cA 174 73 0.2410 0.1149 0.2740 0.14 3val-a1-m1-cI_3val-a1-m1-cA
41 3vai-a1-m1-cB 174 85 0.3133 0.1494 0.3059 2.72e-04 3vai-a1-m1-cA_3vai-a1-m1-cB
42 3vai-a1-m1-cB 174 73 0.2410 0.1149 0.2740 0.14 3vai-a1-m1-cA_3vai-a1-m1-cB
43 3vai-a1-m1-cA 174 85 0.3133 0.1494 0.3059 2.72e-04 3vai-a1-m1-cA_3vai-a1-m1-cB
44 3vai-a1-m1-cA 174 73 0.2410 0.1149 0.2740 0.14 3vai-a1-m1-cA_3vai-a1-m1-cB
45 3ulh-a1-m2-cA 82 76 0.2892 0.2927 0.3158 3.65e-04 3ulh-a1-m1-cA_3ulh-a1-m2-cA
46 3ulh-a1-m1-cA 82 76 0.2892 0.2927 0.3158 3.65e-04 3ulh-a1-m1-cA_3ulh-a1-m2-cA
47 5ca5-a1-m1-cB 248 73 0.2651 0.0887 0.3014 7.35e-04 5ca5-a1-m1-cA_5ca5-a1-m1-cB
48 5ca5-a1-m1-cA 248 73 0.2651 0.0887 0.3014 7.35e-04 5ca5-a1-m1-cA_5ca5-a1-m1-cB
49 3nnc-a2-m4-cA 175 67 0.2530 0.1200 0.3134 8.62e-04 3nnc-a2-m2-cA_3nnc-a2-m4-cA, 3nnc-a2-m3-cA_3nnc-a2-m4-cA
50 3nnc-a2-m4-cA 175 49 0.2048 0.0971 0.3469 0.001 3nnc-a2-m2-cA_3nnc-a2-m4-cA, 3nnc-a2-m3-cA_3nnc-a2-m4-cA
51 3nnc-a2-m3-cA 175 67 0.2530 0.1200 0.3134 8.62e-04 3nnc-a2-m3-cA_3nnc-a2-m4-cA
52 3nnc-a2-m3-cA 175 49 0.2048 0.0971 0.3469 0.001 3nnc-a2-m3-cA_3nnc-a2-m4-cA
53 3nnc-a2-m2-cA 175 67 0.2530 0.1200 0.3134 8.62e-04 3nnc-a2-m2-cA_3nnc-a2-m4-cA
54 3nnc-a2-m2-cA 175 49 0.2048 0.0971 0.3469 0.001 3nnc-a2-m2-cA_3nnc-a2-m4-cA
55 5kw6-a1-m1-cA 201 72 0.2410 0.0995 0.2778 0.002 5kw6-a1-m1-cB_5kw6-a1-m1-cA
56 5kw6-a1-m1-cB 198 72 0.2410 0.1010 0.2778 0.002 5kw6-a1-m1-cB_5kw6-a1-m1-cA
57 6ff7-a1-m1-cz 101 72 0.2048 0.1683 0.2361 0.003 6ff7-a1-m1-cN_6ff7-a1-m1-cz
58 6ff7-a1-m1-cN 101 72 0.2048 0.1683 0.2361 0.003 6ff7-a1-m1-cN_6ff7-a1-m1-cz
59 7wm3-a2-m1-cD 179 59 0.2410 0.1117 0.3390 0.005 7wm3-a2-m1-cB_7wm3-a2-m1-cD
60 7wm3-a2-m1-cB 179 59 0.2410 0.1117 0.3390 0.005 7wm3-a2-m1-cB_7wm3-a2-m1-cD
61 6dcl-a1-m1-cA 182 77 0.2892 0.1319 0.3117 0.005 6dcl-a1-m1-cB_6dcl-a1-m1-cA
62 6dcl-a1-m1-cA 182 55 0.2289 0.1044 0.3455 0.010 6dcl-a1-m1-cB_6dcl-a1-m1-cA
63 6dcl-a1-m1-cB 171 77 0.2892 0.1404 0.3117 0.006 6dcl-a1-m1-cB_6dcl-a1-m1-cA
64 6dcl-a1-m1-cB 171 52 0.2289 0.1111 0.3654 0.073 6dcl-a1-m1-cB_6dcl-a1-m1-cA
65 7sp0-a1-m1-cA 253 73 0.2651 0.0870 0.3014 0.017 7sp0-a1-m1-cB_7sp0-a1-m1-cA
66 7sp0-a1-m1-cA 253 46 0.2048 0.0672 0.3696 0.54 7sp0-a1-m1-cB_7sp0-a1-m1-cA
67 7sp0-a1-m1-cB 244 73 0.2651 0.0902 0.3014 0.017 7sp0-a1-m1-cB_7sp0-a1-m1-cA
68 7sp0-a1-m1-cB 244 50 0.2169 0.0738 0.3600 0.58 7sp0-a1-m1-cB_7sp0-a1-m1-cA
69 3d2w-a2-m2-cA 72 50 0.2410 0.2778 0.4000 0.033 3d2w-a2-m1-cA_3d2w-a2-m2-cA
70 3d2w-a2-m1-cA 72 50 0.2410 0.2778 0.4000 0.033 3d2w-a2-m1-cA_3d2w-a2-m2-cA
71 3bs9-a3-m1-cB 79 74 0.2530 0.2658 0.2838 0.096 3bs9-a3-m1-cA_3bs9-a3-m1-cB
72 3bs9-a3-m1-cA 79 74 0.2530 0.2658 0.2838 0.096 3bs9-a3-m1-cA_3bs9-a3-m1-cB
73 4wik-a1-m1-cA 228 46 0.2048 0.0746 0.3696 0.89 4wik-a1-m1-cB_4wik-a1-m1-cA
74 4wik-a1-m1-cB 225 46 0.2048 0.0756 0.3696 0.94 4wik-a1-m1-cB_4wik-a1-m1-cA
75 2ghp-a2-m1-cF 235 41 0.1084 0.0383 0.2195 2.3 2ghp-a2-m1-cH_2ghp-a2-m1-cF
76 2ghp-a2-m1-cH 228 29 0.1084 0.0395 0.3103 3.5 2ghp-a2-m1-cE_2ghp-a2-m1-cH, 2ghp-a2-m1-cG_2ghp-a2-m1-cH, 2ghp-a2-m1-cH_2ghp-a2-m1-cF
77 2ghp-a2-m1-cG 228 29 0.1084 0.0395 0.3103 3.5 2ghp-a2-m1-cG_2ghp-a2-m1-cH
78 2ghp-a2-m1-cE 228 29 0.1084 0.0395 0.3103 3.5 2ghp-a2-m1-cE_2ghp-a2-m1-cH
79 7og8-a1-m6-cA 68 32 0.1566 0.1912 0.4062 3.9 7og8-a1-m2-cA_7og8-a1-m6-cA
80 7og8-a1-m2-cA 68 32 0.1566 0.1912 0.4062 3.9 7og8-a1-m2-cA_7og8-a1-m6-cA
81 5k6x-a1-m1-cA 374 42 0.1446 0.0321 0.2857 5.1 5k6x-a1-m1-cB_5k6x-a1-m1-cA
82 5k6x-a1-m1-cB 367 42 0.1446 0.0327 0.2857 5.3 5k6x-a1-m1-cB_5k6x-a1-m1-cA
83 1hk9-a1-m1-cA 64 28 0.1446 0.1875 0.4286 8.2 1hk9-a1-m1-cB_1hk9-a1-m1-cA
84 1hk9-a1-m1-cB 63 28 0.1446 0.1905 0.4286 8.4 1hk9-a1-m1-cB_1hk9-a1-m1-cA
85 6nf6-a1-m1-cB 411 41 0.1807 0.0365 0.3659 8.8 6nf6-a1-m1-cA_6nf6-a1-m1-cB
86 6nf6-a1-m1-cA 411 41 0.1807 0.0365 0.3659 8.8 6nf6-a1-m1-cA_6nf6-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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