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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=54)
AAASYDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQGSI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1deb-a5-m3-cA 54 54 1.0000 1.0000 1.0000 1.44e-32 1deb-a5-m1-cA_1deb-a5-m3-cA
2 1deb-a5-m1-cA 54 54 1.0000 1.0000 1.0000 1.44e-32 1deb-a5-m1-cA_1deb-a5-m3-cA
3 1deb-a4-m1-cA 54 54 1.0000 1.0000 1.0000 1.44e-32 1deb-a4-m1-cB_1deb-a4-m1-cA
4 1deb-a3-m1-cA 54 54 1.0000 1.0000 1.0000 1.44e-32 1deb-a3-m2-cB_1deb-a3-m1-cA
5 1deb-a4-m1-cB 53 53 0.9815 1.0000 1.0000 6.04e-32 1deb-a4-m1-cB_1deb-a4-m1-cA
6 1deb-a3-m2-cB 53 53 0.9815 1.0000 1.0000 6.04e-32 1deb-a3-m1-cB_1deb-a3-m2-cB, 1deb-a3-m2-cB_1deb-a3-m1-cA
7 1deb-a3-m1-cB 53 53 0.9815 1.0000 1.0000 6.04e-32 1deb-a3-m1-cB_1deb-a3-m2-cB
8 2h3r-a4-m3-cA 87 27 0.2222 0.1379 0.4444 0.29 2h3r-a4-m1-cA_2h3r-a4-m3-cA
9 2h3r-a4-m1-cA 87 27 0.2222 0.1379 0.4444 0.29 2h3r-a4-m1-cA_2h3r-a4-m3-cA
10 6pfp-a2-m1-cD 156 51 0.2778 0.0962 0.2941 0.31 6pfp-a2-m1-cC_6pfp-a2-m1-cD
11 6pfp-a2-m1-cC 156 51 0.2778 0.0962 0.2941 0.31 6pfp-a2-m1-cC_6pfp-a2-m1-cD
12 2wvr-a1-m2-cA 70 39 0.2778 0.2143 0.3846 3.6 2wvr-a1-m2-cA_2wvr-a1-m2-cB
13 1sjj-a1-m1-cB 863 27 0.2222 0.0139 0.4444 3.8 1sjj-a1-m1-cA_1sjj-a1-m1-cB
14 1sjj-a1-m1-cA 863 27 0.2222 0.0139 0.4444 3.8 1sjj-a1-m1-cA_1sjj-a1-m1-cB
15 2wvr-a1-m2-cB 74 39 0.2778 0.2027 0.3846 3.8 2wvr-a1-m2-cA_2wvr-a1-m2-cB
16 6lw8-a1-m2-cA 320 21 0.1667 0.0281 0.4286 6.3 6lw8-a1-m1-cA_6lw8-a1-m2-cA
17 6lw8-a1-m1-cA 320 21 0.1667 0.0281 0.4286 6.3 6lw8-a1-m1-cA_6lw8-a1-m2-cA
18 4kp3-a1-m1-cD 82 16 0.1852 0.1220 0.6250 7.8 4kp3-a1-m1-cC_4kp3-a1-m1-cD
19 4kp3-a1-m1-cC 81 16 0.1852 0.1235 0.6250 7.8 4kp3-a1-m1-cC_4kp3-a1-m1-cD
20 7kog-a1-m1-cB 1077 26 0.1852 0.0093 0.3846 8.6 7kog-a1-m1-cA_7kog-a1-m1-cB
21 7kog-a1-m1-cA 1077 26 0.1852 0.0093 0.3846 8.6 7kog-a1-m1-cA_7kog-a1-m1-cB
22 2zxx-a2-m1-cD 64 39 0.2593 0.2188 0.3590 9.3 2zxx-a2-m1-cD_2zxx-a2-m1-cE
23 2zxx-a2-m1-cE 77 39 0.2593 0.1818 0.3590 9.4 2zxx-a2-m1-cD_2zxx-a2-m1-cE

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Reference:
Jacob Schwartz et al.

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