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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=21)
AADPLGQALRAIGDEFETRFR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4cim-a2-m1-cP 21 21 1.0000 1.0000 1.0000 4.87e-09 4cim-a2-m1-cP_4cim-a2-m1-cA
2 4cim-a2-m1-cA 146 21 1.0000 0.1438 1.0000 2.34e-08 4cim-a2-m1-cP_4cim-a2-m1-cA
3 2y6w-a1-m1-cA 146 21 0.8571 0.1233 0.8571 3.82e-06 2y6w-a1-m1-cA_2y6w-a1-m1-cB
4 2y6w-a1-m1-cB 147 21 0.8571 0.1224 0.8571 3.90e-06 2y6w-a1-m1-cA_2y6w-a1-m1-cB
5 6w1i-a1-m1-cA 190 18 0.5238 0.0579 0.6111 4.1 6w1i-a1-m1-cC_6w1i-a1-m1-cA
6 6w1i-a1-m1-cB 191 18 0.5238 0.0576 0.6111 4.1 6w1i-a1-m1-cC_6w1i-a1-m1-cB
7 6w1i-a1-m1-cD 191 18 0.5238 0.0576 0.6111 4.4 6w1i-a1-m1-cC_6w1i-a1-m1-cD
8 6w1i-a1-m1-cC 189 18 0.5238 0.0582 0.6111 4.4 6w1i-a1-m1-cC_6w1i-a1-m1-cA, 6w1i-a1-m1-cC_6w1i-a1-m1-cB, 6w1i-a1-m1-cC_6w1i-a1-m1-cD
9 4amb-a1-m1-cA 370 13 0.4286 0.0243 0.6923 8.5 4amb-a1-m1-cA_4amb-a1-m1-cB
10 4amb-a1-m1-cB 373 13 0.4286 0.0241 0.6923 8.7 4amb-a1-m1-cA_4amb-a1-m1-cB
11 4amg-a1-m1-cB 369 13 0.4286 0.0244 0.6923 8.7 4amg-a1-m1-cA_4amg-a1-m1-cB
12 4amg-a1-m1-cA 361 13 0.4286 0.0249 0.6923 8.8 4amg-a1-m1-cA_4amg-a1-m1-cB
13 6x8o-a1-m1-cD 26 16 0.3810 0.3077 0.5000 8.8 6x8o-a1-m1-cA_6x8o-a1-m1-cD, 6x8o-a1-m1-cB_6x8o-a1-m1-cD
14 6x8o-a1-m1-cC 26 16 0.3810 0.3077 0.5000 8.8 6x8o-a1-m1-cA_6x8o-a1-m1-cC
15 6x8o-a1-m1-cB 26 16 0.3810 0.3077 0.5000 8.8 6x8o-a1-m1-cB_6x8o-a1-m1-cD
16 6x8o-a1-m1-cA 26 16 0.3810 0.3077 0.5000 8.8 6x8o-a1-m1-cA_6x8o-a1-m1-cC, 6x8o-a1-m1-cA_6x8o-a1-m1-cD
17 4ex5-a1-m1-cA 486 17 0.4286 0.0185 0.5294 9.6 4ex5-a1-m1-cA_4ex5-a1-m1-cB
18 3eeq-a1-m1-cA 311 15 0.3333 0.0225 0.4667 9.7 3eeq-a1-m1-cB_3eeq-a1-m1-cA
19 3eeq-a1-m1-cB 304 15 0.3333 0.0230 0.4667 9.7 3eeq-a1-m1-cB_3eeq-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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