HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=98)
AAIVKLGGDDGSLAFVPNNITVGAGESIEFINNAGFPHNIVFDEDAVPAGVDADAISAED
YLNSKGQTVVRKLTTPGTYGVYCDPHSGAGMKMTITVQ

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	7pcy-a1-m4-cA	98	98	1.0000	1.0000	1.0000	1.82e-68	7pcy-a1-m3-cA_7pcy-a1-m4-cA
2	7pcy-a1-m3-cA	98	98	1.0000	1.0000	1.0000	1.82e-68	7pcy-a1-m3-cA_7pcy-a1-m4-cA
3	1pcs-a1-m2-cA	98	97	0.4490	0.4490	0.4536	4.89e-26	1pcs-a1-m1-cA_1pcs-a1-m2-cA
4	1pcs-a1-m1-cA	98	97	0.4490	0.4490	0.4536	4.89e-26	1pcs-a1-m1-cA_1pcs-a1-m2-cA
5	2q5b-a5-m3-cB	105	100	0.4184	0.3905	0.4100	9.28e-20	2q5b-a5-m2-cA_2q5b-a5-m3-cB
6	2q5b-a5-m2-cA	105	100	0.4184	0.3905	0.4100	9.28e-20	2q5b-a5-m1-cC_2q5b-a5-m2-cA, 2q5b-a5-m2-cA_2q5b-a5-m3-cB
7	2q5b-a5-m1-cC	105	100	0.4184	0.3905	0.4100	9.28e-20	2q5b-a5-m1-cC_2q5b-a5-m2-cA
8	1baw-a2-m1-cB	105	100	0.4184	0.3905	0.4100	9.28e-20	1baw-a2-m1-cA_1baw-a2-m1-cB
9	1baw-a2-m1-cA	105	100	0.4184	0.3905	0.4100	9.28e-20	1baw-a2-m1-cA_1baw-a2-m1-cB
10	1baw-a1-m2-cB	105	100	0.4184	0.3905	0.4100	9.28e-20	1baw-a1-m1-cA_1baw-a1-m2-cB
11	1baw-a1-m1-cA	105	100	0.4184	0.3905	0.4100	9.28e-20	1baw-a1-m1-cA_1baw-a1-m2-cB
12	2w8c-a3-m8-cB	106	100	0.4184	0.3868	0.4100	1.05e-19	2w8c-a3-m1-cA_2w8c-a3-m8-cB
13	2w8c-a3-m1-cA	106	100	0.4184	0.3868	0.4100	1.05e-19	2w8c-a3-m1-cA_2w8c-a3-m8-cB
14	3erx-a2-m1-cB	123	84	0.2551	0.2033	0.2976	2.00e-06	3erx-a2-m1-cA_3erx-a2-m1-cB
15	3erx-a2-m1-cA	123	84	0.2551	0.2033	0.2976	2.00e-06	3erx-a2-m1-cA_3erx-a2-m1-cB
16	3erx-a1-m2-cB	123	84	0.2551	0.2033	0.2976	2.00e-06	3erx-a1-m1-cA_3erx-a1-m2-cB
17	3erx-a1-m1-cA	123	84	0.2551	0.2033	0.2976	2.00e-06	3erx-a1-m1-cA_3erx-a1-m2-cB
18	3ie9-a3-m3-cA	105	78	0.2245	0.2095	0.2821	4.88e-04	3ie9-a3-m2-cA_3ie9-a3-m3-cA
19	3ie9-a3-m2-cA	105	78	0.2245	0.2095	0.2821	4.88e-04	3ie9-a3-m2-cA_3ie9-a3-m3-cA
20	3ie9-a2-m6-cA	105	78	0.2245	0.2095	0.2821	4.88e-04	3ie9-a2-m3-cA_3ie9-a2-m6-cA
21	3ie9-a2-m3-cA	105	78	0.2245	0.2095	0.2821	4.88e-04	3ie9-a2-m3-cA_3ie9-a2-m6-cA
22	3ezk-a1-m1-cE	553	34	0.1531	0.0271	0.4412	1.3	3ezk-a1-m1-cD_3ezk-a1-m1-cE
23	3ezk-a1-m1-cD	553	34	0.1531	0.0271	0.4412	1.3	3ezk-a1-m1-cD_3ezk-a1-m1-cE
24	7ai3-a2-m1-cD	107	37	0.1429	0.1308	0.3784	2.6	7ai3-a2-m1-cD_7ai3-a2-m1-cC
25	7ai3-a2-m1-cC	113	37	0.1429	0.1239	0.3784	2.7	7ai3-a2-m1-cD_7ai3-a2-m1-cC
26	4qbo-a1-m2-cA	92	23	0.1122	0.1196	0.4783	3.0	4qbo-a1-m1-cA_4qbo-a1-m2-cA
27	4qbo-a1-m1-cA	92	23	0.1122	0.1196	0.4783	3.0	4qbo-a1-m1-cA_4qbo-a1-m2-cA
28	2aan-a2-m2-cA	123	103	0.3061	0.2439	0.2913	7.8	2aan-a2-m1-cA_2aan-a2-m2-cA
29	2aan-a2-m1-cA	123	103	0.3061	0.2439	0.2913	7.8	2aan-a2-m1-cA_2aan-a2-m2-cA
30	5o3v-a1-m1-cB	716	57	0.2143	0.0293	0.3684	8.1	5o3v-a1-m1-cA_5o3v-a1-m1-cB
31	5o3v-a1-m1-cA	716	57	0.2143	0.0293	0.3684	8.1	5o3v-a1-m1-cA_5o3v-a1-m1-cB

[Back]

Reference:
Jacob Schwartz et al.