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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
AAPLVAETDANAKSLGYVADTTKADKTKYPKHTKDQSCSTCALYQGKTAPQGACPLFAGK
EVVAKGWCSAWAKKA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1hlq-a1-m1-cA 75 75 1.0000 1.0000 1.0000 1.71e-49 1hlq-a1-m1-cB_1hlq-a1-m1-cA, 1hlq-a1-m1-cC_1hlq-a1-m1-cA
2 1hlq-a1-m1-cC 74 74 0.9867 1.0000 1.0000 5.20e-49 1hlq-a1-m1-cB_1hlq-a1-m1-cC, 1hlq-a1-m1-cC_1hlq-a1-m1-cA
3 1hlq-a1-m1-cB 74 74 0.9867 1.0000 1.0000 5.20e-49 1hlq-a1-m1-cB_1hlq-a1-m1-cA, 1hlq-a1-m1-cB_1hlq-a1-m1-cC
4 1cku-a1-m1-cB 85 78 0.3600 0.3176 0.3462 2.46e-07 1cku-a1-m1-cA_1cku-a1-m1-cB
5 1cku-a1-m1-cA 85 78 0.3600 0.3176 0.3462 2.46e-07 1cku-a1-m1-cA_1cku-a1-m1-cB
6 1js2-a1-m1-cD 89 78 0.3467 0.2921 0.3333 4.67e-06 1js2-a1-m1-cA_1js2-a1-m1-cD
7 1js2-a1-m1-cC 89 78 0.3467 0.2921 0.3333 4.67e-06 1js2-a1-m1-cA_1js2-a1-m1-cC
8 1js2-a1-m1-cB 89 78 0.3467 0.2921 0.3333 4.67e-06 1js2-a1-m1-cA_1js2-a1-m1-cB
9 1js2-a1-m1-cA 89 78 0.3467 0.2921 0.3333 4.67e-06 1js2-a1-m1-cA_1js2-a1-m1-cB, 1js2-a1-m1-cA_1js2-a1-m1-cC, 1js2-a1-m1-cA_1js2-a1-m1-cD
10 3hip-a2-m1-cC 82 76 0.2800 0.2561 0.2763 2.73e-04 3hip-a2-m1-cB_3hip-a2-m1-cC
11 3hip-a1-m2-cA 82 76 0.2800 0.2561 0.2763 2.73e-04 3hip-a1-m1-cA_3hip-a1-m2-cA
12 3hip-a1-m1-cA 82 76 0.2800 0.2561 0.2763 2.73e-04 3hip-a1-m1-cA_3hip-a1-m2-cA
13 3hip-a2-m1-cB 80 75 0.2667 0.2500 0.2667 6.69e-04 3hip-a2-m1-cB_3hip-a2-m1-cC
14 4xza-a1-m1-cA 366 20 0.1467 0.0301 0.5500 3.7 4xza-a1-m1-cB_4xza-a1-m1-cA
15 4xza-a1-m1-cB 365 20 0.1467 0.0301 0.5500 3.7 4xza-a1-m1-cB_4xza-a1-m1-cA
16 6k9z-a1-m1-cA 309 18 0.1067 0.0259 0.4444 6.7 6k9z-a1-m1-cB_6k9z-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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