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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
AAVHLTLKKIQAPKFSIEHDFSPSDTILQIKQHLISEEKASHISEIKLLLKGKVLHDNLF
LSDLKVTPANSTITVMIKPN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4a20-a1-m2-cA 80 80 1.0000 1.0000 1.0000 3.90e-52 4a20-a1-m1-cA_4a20-a1-m2-cA
2 4a20-a1-m1-cA 80 80 1.0000 1.0000 1.0000 3.90e-52 4a20-a1-m1-cA_4a20-a1-m2-cA
3 2wyq-a1-m2-cA 77 77 0.2625 0.2727 0.2727 0.003 2wyq-a1-m1-cA_2wyq-a1-m2-cA
4 2wyq-a1-m1-cA 77 77 0.2625 0.2727 0.2727 0.003 2wyq-a1-m1-cA_2wyq-a1-m2-cA
5 5o6s-a2-m1-cD 75 63 0.2375 0.2533 0.3016 0.47 5o6s-a2-m1-cC_5o6s-a2-m1-cD
6 5o6t-a2-m1-cD 74 63 0.2375 0.2568 0.3016 0.49 5o6t-a2-m1-cD_5o6t-a2-m1-cC
7 5o6t-a2-m1-cC 75 63 0.2375 0.2533 0.3016 0.57 5o6t-a2-m1-cD_5o6t-a2-m1-cC
8 5o6s-a2-m1-cC 75 63 0.2375 0.2533 0.3016 0.57 5o6s-a2-m1-cC_5o6s-a2-m1-cD
9 2ach-a2-m2-cA 337 46 0.2000 0.0475 0.3478 0.63 2ach-a2-m2-cA_2ach-a2-m1-cA
10 2ach-a2-m1-cA 337 46 0.2000 0.0475 0.3478 0.63 2ach-a2-m2-cA_2ach-a2-m1-cA
11 1ndd-a5-m1-cB 76 51 0.1750 0.1842 0.2745 0.91 1ndd-a5-m1-cD_1ndd-a5-m1-cB
12 1ndd-a5-m1-cA 74 51 0.1750 0.1892 0.2745 0.97 1ndd-a5-m1-cD_1ndd-a5-m1-cA
13 1ndd-a5-m1-cD 73 51 0.1750 0.1918 0.2745 0.97 1ndd-a5-m1-cC_1ndd-a5-m1-cD, 1ndd-a5-m1-cD_1ndd-a5-m1-cA, 1ndd-a5-m1-cD_1ndd-a5-m1-cB
14 1ndd-a5-m1-cC 73 51 0.1750 0.1918 0.2745 0.97 1ndd-a5-m1-cC_1ndd-a5-m1-cD
15 3dzz-a1-m1-cB 374 38 0.1750 0.0374 0.3684 1.9 3dzz-a1-m1-cB_3dzz-a1-m1-cA
16 3dzz-a1-m1-cA 375 38 0.1750 0.0373 0.3684 1.9 3dzz-a1-m1-cB_3dzz-a1-m1-cA
17 8dhl-a1-m1-cA 827 59 0.1750 0.0169 0.2373 2.6 8dhl-a1-m1-cA_8dhl-a1-m1-cB
18 8dhl-a1-m1-cB 853 59 0.1750 0.0164 0.2373 2.6 8dhl-a1-m1-cA_8dhl-a1-m1-cB
19 5u1j-a4-m1-cA 289 37 0.1625 0.0450 0.3514 8.0 5u1j-a4-m1-cA_5u1j-a4-m1-cD

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Reference:
Jacob Schwartz et al.

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