Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=30)
ACYCRIPACIAGERRYGTCAYQGRAWAFCC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4lbf-a2-m1-cH 30 30 1.0000 1.0000 1.0000 1.28e-15 4lbf-a2-m1-cE_4lbf-a2-m1-cH, 4lbf-a2-m1-cF_4lbf-a2-m1-cH
2 4lbf-a2-m1-cG 30 30 1.0000 1.0000 1.0000 1.28e-15 4lbf-a2-m1-cE_4lbf-a2-m1-cG
3 4lbf-a2-m1-cF 30 30 1.0000 1.0000 1.0000 1.28e-15 4lbf-a2-m1-cE_4lbf-a2-m1-cF, 4lbf-a2-m1-cF_4lbf-a2-m1-cH
4 4lbf-a1-m1-cC 30 30 1.0000 1.0000 1.0000 1.28e-15 4lbf-a1-m1-cB_4lbf-a1-m1-cC
5 4lbf-a1-m1-cB 30 30 1.0000 1.0000 1.0000 1.28e-15 4lbf-a1-m1-cA_4lbf-a1-m1-cB, 4lbf-a1-m1-cB_4lbf-a1-m1-cC
6 4lbf-a1-m1-cA 30 30 1.0000 1.0000 1.0000 1.28e-15 4lbf-a1-m1-cA_4lbf-a1-m1-cB
7 3gny-a2-m1-cB 30 30 0.9333 0.9333 0.9333 1.71e-14 3gny-a2-m1-cA_3gny-a2-m1-cB
8 3gny-a2-m1-cA 30 30 0.9333 0.9333 0.9333 1.71e-14 3gny-a2-m1-cA_3gny-a2-m1-cB
9 3lvx-a3-m9-cB 30 30 0.9000 0.9000 0.9000 1.49e-13 3lvx-a3-m14-cA_3lvx-a3-m9-cB, 3lvx-a3-m9-cA_3lvx-a3-m9-cB
10 3lvx-a3-m9-cA 30 30 0.9000 0.9000 0.9000 1.49e-13 3lvx-a3-m20-cA_3lvx-a3-m9-cA, 3lvx-a3-m9-cA_3lvx-a3-m9-cB
11 3lvx-a3-m20-cA 30 30 0.9000 0.9000 0.9000 1.49e-13 3lvx-a3-m20-cA_3lvx-a3-m9-cA
12 3lvx-a3-m14-cA 30 30 0.9000 0.9000 0.9000 1.49e-13 3lvx-a3-m14-cA_3lvx-a3-m9-cB
13 3h6c-a1-m4-cA 30 30 0.9000 0.9000 0.9000 1.66e-13 3h6c-a1-m2-cB_3h6c-a1-m4-cA
14 3h6c-a1-m2-cB 30 30 0.9000 0.9000 0.9000 1.66e-13 3h6c-a1-m2-cB_3h6c-a1-m4-cA
15 4lb7-a1-m1-cE 30 30 0.9333 0.9333 0.9333 1.94e-13 4lb7-a1-m1-cA_4lb7-a1-m1-cE
16 4lb7-a1-m1-cA 30 30 0.9333 0.9333 0.9333 1.94e-13 4lb7-a1-m1-cA_4lb7-a1-m1-cE
17 4lb1-a1-m1-cE 30 30 0.8667 0.8667 0.8667 3.41e-12 4lb1-a1-m1-cD_4lb1-a1-m1-cE
18 4lb1-a1-m1-cD 30 30 0.8667 0.8667 0.8667 3.41e-12 4lb1-a1-m1-cD_4lb1-a1-m1-cE
19 1zmk-a2-m4-cB 28 29 0.8667 0.9286 0.8966 2.23e-11 1zmk-a2-m3-cB_1zmk-a2-m4-cB
20 1zmk-a2-m4-cA 28 29 0.8667 0.9286 0.8966 2.23e-11 1zmk-a2-m3-cA_1zmk-a2-m4-cA
21 1zmk-a2-m3-cB 28 29 0.8667 0.9286 0.8966 2.23e-11 1zmk-a2-m3-cB_1zmk-a2-m4-cB
22 1zmk-a2-m3-cA 28 29 0.8667 0.9286 0.8966 2.23e-11 1zmk-a2-m3-cA_1zmk-a2-m4-cA
23 1zmi-a4-m4-cC 28 29 0.8667 0.9286 0.8966 2.23e-11 1zmi-a4-m1-cB_1zmi-a4-m4-cC
24 1zmi-a4-m1-cB 28 29 0.8667 0.9286 0.8966 2.23e-11 1zmi-a4-m1-cB_1zmi-a4-m4-cC
25 1zmh-a4-m3-cC 28 29 0.8667 0.9286 0.8966 2.23e-11 1zmh-a4-m1-cC_1zmh-a4-m3-cC
26 1zmh-a4-m1-cC 28 29 0.8667 0.9286 0.8966 2.23e-11 1zmh-a4-m1-cC_1zmh-a4-m3-cC
27 4lbf-a2-m1-cE 25 30 0.8333 1.0000 0.8333 1.66e-09 4lbf-a2-m1-cE_4lbf-a2-m1-cF, 4lbf-a2-m1-cE_4lbf-a2-m1-cG, 4lbf-a2-m1-cE_4lbf-a2-m1-cH
28 2pm5-a6-m4-cB 27 29 0.8000 0.8889 0.8276 5.15e-08 2pm5-a6-m1-cB_2pm5-a6-m4-cB
29 2pm5-a6-m1-cB 27 29 0.8000 0.8889 0.8276 5.15e-08 2pm5-a6-m1-cB_2pm5-a6-m4-cB
30 3qte-a6-m2-cD 32 30 0.4667 0.4375 0.4667 0.019 3qte-a6-m1-cC_3qte-a6-m2-cD
31 3qte-a6-m1-cC 32 30 0.4667 0.4375 0.4667 0.019 3qte-a6-m1-cC_3qte-a6-m2-cD
32 5cui-a3-m1-cF 32 30 0.4333 0.4062 0.4333 0.033 5cui-a3-m1-cD_5cui-a3-m1-cF, 5cui-a3-m1-cE_5cui-a3-m1-cF
33 5cui-a3-m1-cE 32 30 0.4333 0.4062 0.4333 0.033 5cui-a3-m1-cE_5cui-a3-m1-cF
34 5cui-a3-m1-cD 32 30 0.4333 0.4062 0.4333 0.033 5cui-a3-m1-cD_5cui-a3-m1-cF
35 5cui-a3-m1-cC 32 30 0.4333 0.4062 0.4333 0.033 5cui-a3-m1-cB_5cui-a3-m1-cC
36 5cui-a3-m1-cB 32 30 0.4333 0.4062 0.4333 0.033 5cui-a3-m1-cB_5cui-a3-m1-cC
37 2mit-a1-m1-cB 32 30 0.4000 0.3750 0.4000 0.18 2mit-a1-m1-cA_2mit-a1-m1-cB
38 2mit-a1-m1-cA 32 30 0.4000 0.3750 0.4000 0.18 2mit-a1-m1-cA_2mit-a1-m1-cB
39 1zmp-a7-m2-cC 32 30 0.4000 0.3750 0.4000 0.18 1zmp-a7-m2-cA_1zmp-a7-m2-cC
40 1zmp-a7-m2-cA 32 30 0.4000 0.3750 0.4000 0.18 1zmp-a7-m2-cA_1zmp-a7-m2-cC, 1zmp-a7-m6-cD_1zmp-a7-m2-cA
41 1zmp-a7-m1-cC 32 30 0.4000 0.3750 0.4000 0.18 1zmp-a7-m6-cD_1zmp-a7-m1-cC
42 1zmp-a6-m6-cB 32 30 0.4000 0.3750 0.4000 0.18 1zmp-a6-m1-cC_1zmp-a6-m6-cB
43 1zmp-a6-m1-cC 32 30 0.4000 0.3750 0.4000 0.18 1zmp-a6-m1-cC_1zmp-a6-m6-cB
44 1zmp-a5-m4-cB 32 30 0.4000 0.3750 0.4000 0.18 1zmp-a5-m1-cA_1zmp-a5-m4-cB
45 1zmp-a5-m1-cA 32 30 0.4000 0.3750 0.4000 0.18 1zmp-a5-m1-cA_1zmp-a5-m4-cB
46 6dmq-a4-m1-cH 31 30 0.4000 0.3871 0.4000 0.18 6dmq-a4-m1-cG_6dmq-a4-m1-cH
47 6dmq-a4-m1-cG 31 30 0.4000 0.3871 0.4000 0.18 6dmq-a4-m1-cG_6dmq-a4-m1-cH
48 4rbw-a2-m1-cC 32 30 0.4000 0.3750 0.4000 0.71 4rbw-a2-m1-cB_4rbw-a2-m1-cC
49 4rbw-a2-m1-cB 32 30 0.4000 0.3750 0.4000 0.71 4rbw-a2-m1-cB_4rbw-a2-m1-cC
50 7yoa-a1-m1-cB 33 30 0.4000 0.3636 0.4000 0.94 7yoa-a1-m1-cA_7yoa-a1-m1-cB
51 7yoa-a1-m1-cA 33 30 0.4000 0.3636 0.4000 0.94 7yoa-a1-m1-cA_7yoa-a1-m1-cB
52 2zx6-a1-m3-cA 442 17 0.2333 0.0158 0.4118 6.8 2zx6-a1-m2-cA_2zx6-a1-m3-cA
53 2zx6-a1-m2-cA 442 17 0.2333 0.0158 0.4118 6.8 2zx6-a1-m2-cA_2zx6-a1-m3-cA
54 2zxd-a1-m3-cB 441 17 0.2333 0.0159 0.4118 6.8 2zxd-a1-m3-cA_2zxd-a1-m3-cB
55 2zxd-a1-m3-cA 441 17 0.2333 0.0159 0.4118 6.8 2zxd-a1-m3-cA_2zxd-a1-m3-cB
56 4e86-a14-m2-cL 30 29 0.3667 0.3667 0.3793 7.1 4e86-a14-m1-cL_4e86-a14-m2-cL
57 4e86-a14-m1-cL 30 29 0.3667 0.3667 0.3793 7.1 4e86-a14-m1-cL_4e86-a14-m2-cL
58 7uwr-a1-m1-cB 837 23 0.2667 0.0096 0.3478 8.6 7uwr-a1-m1-cA_7uwr-a1-m1-cB
59 7uwr-a1-m1-cA 837 23 0.2667 0.0096 0.3478 8.6 7uwr-a1-m1-cA_7uwr-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600