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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT
SLALDESLFRGRQIKVIPKR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3b4d-a1-m2-cA 80 80 1.0000 1.0000 1.0000 7.04e-56 3b4d-a1-m1-cA_3b4d-a1-m2-cA
2 3b4d-a1-m1-cA 80 80 1.0000 1.0000 1.0000 7.04e-56 3b4d-a1-m1-cA_3b4d-a1-m2-cA
3 2jwn-a1-m1-cB 124 79 0.7000 0.4516 0.7089 1.75e-42 2jwn-a1-m1-cA_2jwn-a1-m1-cB
4 2jwn-a1-m1-cA 124 79 0.7000 0.4516 0.7089 1.75e-42 2jwn-a1-m1-cA_2jwn-a1-m1-cB
5 5iqq-a1-m1-cD 81 74 0.3500 0.3457 0.3784 1.09e-08 5iqq-a1-m1-cD_5iqq-a1-m1-cC
6 5iqq-a1-m1-cC 83 74 0.3500 0.3373 0.3784 1.09e-08 5iqq-a1-m1-cD_5iqq-a1-m1-cC
7 3val-a1-m1-cI 172 83 0.2875 0.1337 0.2771 5.92e-06 3val-a1-m1-cI_3val-a1-m1-cA
8 2g4b-a1-m2-cA 172 83 0.2875 0.1337 0.2771 5.92e-06 2g4b-a1-m1-cA_2g4b-a1-m2-cA
9 2g4b-a1-m1-cA 172 83 0.2875 0.1337 0.2771 5.92e-06 2g4b-a1-m1-cA_2g4b-a1-m2-cA
10 3val-a1-m1-cA 174 83 0.2875 0.1322 0.2771 6.46e-06 3val-a1-m1-cI_3val-a1-m1-cA
11 3vai-a1-m1-cB 174 83 0.2875 0.1322 0.2771 6.46e-06 3vai-a1-m1-cA_3vai-a1-m1-cB
12 3vai-a1-m1-cA 174 83 0.2875 0.1322 0.2771 6.46e-06 3vai-a1-m1-cA_3vai-a1-m1-cB
13 6dcl-a1-m1-cA 182 56 0.2125 0.0934 0.3036 4.95e-05 6dcl-a1-m1-cB_6dcl-a1-m1-cA
14 6dcl-a1-m1-cA 182 77 0.2250 0.0989 0.2338 1.47e-04 6dcl-a1-m1-cB_6dcl-a1-m1-cA
15 5t9p-a6-m1-cD 91 77 0.2625 0.2308 0.2727 5.76e-05 5t9p-a6-m1-cD_5t9p-a6-m1-cC
16 5t9p-a6-m1-cC 106 77 0.2625 0.1981 0.2727 8.24e-05 5t9p-a6-m1-cD_5t9p-a6-m1-cC
17 6dcl-a1-m1-cB 171 77 0.2250 0.1053 0.2338 1.39e-04 6dcl-a1-m1-cB_6dcl-a1-m1-cA
18 6dcl-a1-m1-cB 171 56 0.2000 0.0936 0.2857 0.013 6dcl-a1-m1-cB_6dcl-a1-m1-cA
19 5kw6-a1-m1-cB 198 72 0.2375 0.0960 0.2639 2.00e-04 5kw6-a1-m1-cB_5kw6-a1-m1-cA
20 5kw6-a1-m1-cB 198 58 0.1750 0.0707 0.2414 0.021 5kw6-a1-m1-cB_5kw6-a1-m1-cA
21 5kw6-a1-m1-cA 201 72 0.2375 0.0945 0.2639 2.06e-04 5kw6-a1-m1-cB_5kw6-a1-m1-cA
22 5kw6-a1-m1-cA 201 58 0.1750 0.0697 0.2414 0.022 5kw6-a1-m1-cB_5kw6-a1-m1-cA
23 6r5k-a1-m1-cF 165 74 0.2500 0.1212 0.2703 3.31e-04 6r5k-a1-m1-cF_6r5k-a1-m1-cH
24 7wm3-a2-m1-cD 179 77 0.2375 0.1061 0.2468 3.46e-04 7wm3-a2-m1-cB_7wm3-a2-m1-cD
25 7wm3-a2-m1-cD 179 55 0.1750 0.0782 0.2545 7.06e-04 7wm3-a2-m1-cB_7wm3-a2-m1-cD
26 7wm3-a2-m1-cB 179 77 0.2375 0.1061 0.2468 3.46e-04 7wm3-a2-m1-cB_7wm3-a2-m1-cD
27 7wm3-a2-m1-cB 179 55 0.1750 0.0782 0.2545 7.06e-04 7wm3-a2-m1-cB_7wm3-a2-m1-cD
28 6r5k-a1-m1-cD 390 74 0.2500 0.0513 0.2703 5.40e-04 6r5k-a1-m1-cD_6r5k-a1-m1-cH
29 6r5k-a1-m1-cH 394 74 0.2500 0.0508 0.2703 5.46e-04 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
30 3md3-a2-m2-cA 165 72 0.2375 0.1152 0.2639 0.002 3md3-a2-m1-cA_3md3-a2-m2-cA
31 3md3-a2-m2-cA 165 76 0.1625 0.0788 0.1711 0.45 3md3-a2-m1-cA_3md3-a2-m2-cA
32 3md3-a2-m1-cA 165 72 0.2375 0.1152 0.2639 0.002 3md3-a2-m1-cA_3md3-a2-m2-cA
33 3md3-a2-m1-cA 165 76 0.1625 0.0788 0.1711 0.45 3md3-a2-m1-cA_3md3-a2-m2-cA
34 6dbp-a1-m1-cA 84 53 0.1375 0.1310 0.2075 0.003 6dbp-a1-m1-cB_6dbp-a1-m1-cA
35 6dbp-a1-m1-cB 82 53 0.1375 0.1341 0.2075 0.003 6dbp-a1-m1-cB_6dbp-a1-m1-cA
36 5ifm-a1-m1-cB 259 58 0.2500 0.0772 0.3448 0.020 5ifm-a1-m1-cA_5ifm-a1-m1-cB
37 5ifm-a1-m1-cB 259 72 0.2625 0.0811 0.2917 0.12 5ifm-a1-m1-cA_5ifm-a1-m1-cB
38 5ifm-a1-m1-cA 254 58 0.2500 0.0787 0.3448 0.024 5ifm-a1-m1-cA_5ifm-a1-m1-cB
39 5ifm-a1-m1-cA 254 72 0.2625 0.0827 0.2917 0.15 5ifm-a1-m1-cA_5ifm-a1-m1-cB
40 3d2w-a2-m2-cA 72 72 0.2625 0.2917 0.2917 0.17 3d2w-a2-m1-cA_3d2w-a2-m2-cA
41 3d2w-a2-m1-cA 72 72 0.2625 0.2917 0.2917 0.17 3d2w-a2-m1-cA_3d2w-a2-m2-cA
42 3md1-a4-m5-cB 79 73 0.1500 0.1519 0.1644 0.43 3md1-a4-m4-cB_3md1-a4-m5-cB
43 3md1-a4-m4-cB 79 73 0.1500 0.1519 0.1644 0.43 3md1-a4-m4-cB_3md1-a4-m5-cB
44 6n3f-a1-m1-cC 94 58 0.2250 0.1915 0.3103 0.50 6n3f-a1-m1-cC_6n3f-a1-m1-cA
45 6n3f-a1-m1-cA 95 58 0.2250 0.1895 0.3103 0.52 6n3f-a1-m1-cC_6n3f-a1-m1-cA
46 3nnc-a2-m4-cA 175 80 0.2500 0.1143 0.2500 0.72 3nnc-a2-m2-cA_3nnc-a2-m4-cA, 3nnc-a2-m3-cA_3nnc-a2-m4-cA
47 3nnc-a2-m3-cA 175 80 0.2500 0.1143 0.2500 0.72 3nnc-a2-m3-cA_3nnc-a2-m4-cA
48 3nnc-a2-m2-cA 175 80 0.2500 0.1143 0.2500 0.72 3nnc-a2-m2-cA_3nnc-a2-m4-cA
49 4ce0-a1-m2-cA 213 68 0.2375 0.0892 0.2794 0.89 4ce0-a1-m1-cA_4ce0-a1-m2-cA
50 4ce0-a1-m1-cA 213 68 0.2375 0.0892 0.2794 0.89 4ce0-a1-m1-cA_4ce0-a1-m2-cA
51 6ff7-a1-m1-cz 101 51 0.1750 0.1386 0.2745 1.4 6ff7-a1-m1-cN_6ff7-a1-m1-cz
52 6ff7-a1-m1-cN 101 51 0.1750 0.1386 0.2745 1.4 6ff7-a1-m1-cN_6ff7-a1-m1-cz
53 6w7x-a1-m2-cA 364 33 0.1375 0.0302 0.3333 6.0 6w7x-a1-m1-cA_6w7x-a1-m2-cA
54 6w7x-a1-m1-cA 364 33 0.1375 0.0302 0.3333 6.0 6w7x-a1-m1-cA_6w7x-a1-m2-cA
55 3bs9-a3-m1-cB 79 50 0.1375 0.1392 0.2200 6.2 3bs9-a3-m1-cA_3bs9-a3-m1-cB
56 3bs9-a3-m1-cA 79 50 0.1375 0.1392 0.2200 6.2 3bs9-a3-m1-cA_3bs9-a3-m1-cB
57 6gc5-a1-m1-cA 79 58 0.1750 0.1772 0.2414 7.3 6gc5-a1-m1-cB_6gc5-a1-m1-cA
58 6gd1-a1-m1-cB 187 58 0.1750 0.0749 0.2414 7.7 6gd1-a1-m1-cB_6gd1-a1-m1-cA
59 6gd1-a1-m1-cA 190 58 0.1750 0.0737 0.2414 8.4 6gd1-a1-m1-cB_6gd1-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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