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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
ADGKAIFQQKGCGSCHQANVDTVGPSLKKIAQAYAGKEDQLIKFLKGEAPAIVDPAKEAI
MKPQLTMLKGLSDAELKALADFILSH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2zxy-a1-m2-cA 86 86 1.0000 1.0000 1.0000 3.58e-58 2zxy-a1-m1-cA_2zxy-a1-m2-cA
2 2zxy-a1-m1-cA 86 86 1.0000 1.0000 1.0000 3.58e-58 2zxy-a1-m1-cA_2zxy-a1-m2-cA
3 3x15-a2-m1-cJ 87 86 1.0000 0.9885 1.0000 3.69e-58 3x15-a2-m1-cD_3x15-a2-m1-cJ
4 3x15-a2-m1-cD 87 86 1.0000 0.9885 1.0000 3.69e-58 3x15-a2-m1-cD_3x15-a2-m1-cJ
5 3x15-a1-m1-cG 87 86 1.0000 0.9885 1.0000 3.69e-58 3x15-a1-m1-cA_3x15-a1-m1-cG
6 3x15-a1-m1-cA 87 86 1.0000 0.9885 1.0000 3.69e-58 3x15-a1-m1-cA_3x15-a1-m1-cG
7 5z25-a1-m3-cA 96 50 0.5581 0.5000 0.9600 1.54e-29 5z25-a1-m2-cA_5z25-a1-m3-cA
8 5z25-a1-m3-cA 96 32 0.3721 0.3333 1.0000 4.35e-15 5z25-a1-m2-cA_5z25-a1-m3-cA
9 5z25-a1-m2-cA 96 50 0.5581 0.5000 0.9600 1.54e-29 5z25-a1-m2-cA_5z25-a1-m3-cA
10 5z25-a1-m2-cA 96 32 0.3721 0.3333 1.0000 4.35e-15 5z25-a1-m2-cA_5z25-a1-m3-cA
11 1ynr-a1-m1-cD 79 81 0.3256 0.3544 0.3457 4.40e-07 1ynr-a1-m1-cD_1ynr-a1-m1-cA, 1ynr-a1-m1-cD_1ynr-a1-m1-cC
12 4zid-a1-m2-cA 80 81 0.3256 0.3500 0.3457 4.64e-07 4zid-a1-m1-cA_4zid-a1-m2-cA
13 4zid-a1-m1-cA 80 81 0.3256 0.3500 0.3457 4.64e-07 4zid-a1-m1-cA_4zid-a1-m2-cA
14 1ynr-a1-m1-cC 80 81 0.3256 0.3500 0.3457 4.64e-07 1ynr-a1-m1-cA_1ynr-a1-m1-cC, 1ynr-a1-m1-cD_1ynr-a1-m1-cC
15 1ynr-a1-m1-cA 80 81 0.3256 0.3500 0.3457 4.64e-07 1ynr-a1-m1-cA_1ynr-a1-m1-cC, 1ynr-a1-m1-cD_1ynr-a1-m1-cA
16 3x39-a2-m3-cB 82 88 0.3140 0.3293 0.3068 5.45e-07 3x39-a2-m1-cB_3x39-a2-m3-cB
17 3x39-a2-m1-cB 82 88 0.3140 0.3293 0.3068 5.45e-07 3x39-a2-m1-cB_3x39-a2-m3-cB
18 5aus-a1-m1-cA 79 81 0.3256 0.3544 0.3457 1.89e-05 5aus-a1-m1-cA_5aus-a1-m1-cC
19 5aus-a1-m1-cC 83 84 0.3256 0.3373 0.3333 5.27e-05 5aus-a1-m1-cA_5aus-a1-m1-cC
20 5aur-a2-m1-cG 83 84 0.3256 0.3373 0.3333 5.27e-05 5aur-a2-m1-cE_5aur-a2-m1-cG
21 5aur-a2-m1-cE 83 84 0.3256 0.3373 0.3333 5.27e-05 5aur-a2-m1-cE_5aur-a2-m1-cG
22 1i8o-a2-m2-cA 113 34 0.1628 0.1239 0.4118 0.030 1i8o-a2-m1-cA_1i8o-a2-m2-cA
23 1i8o-a2-m1-cA 113 34 0.1628 0.1239 0.4118 0.030 1i8o-a2-m1-cA_1i8o-a2-m2-cA
24 7wsq-a1-m1-cF 418 97 0.3140 0.0646 0.2784 0.55 7wsq-a1-m1-cC_7wsq-a1-m1-cF
25 7wsq-a1-m1-cC 418 97 0.3140 0.0646 0.2784 0.55 7wsq-a1-m1-cC_7wsq-a1-m1-cF
26 2dge-a2-m2-cD 100 88 0.2442 0.2100 0.2386 1.0 2dge-a2-m2-cD_2dge-a2-m2-cB
27 2dge-a1-m1-cD 100 88 0.2442 0.2100 0.2386 1.0 2dge-a1-m1-cD_2dge-a1-m1-cA
28 2dge-a2-m2-cB 102 88 0.2442 0.2059 0.2386 1.0 2dge-a2-m1-cA_2dge-a2-m2-cB, 2dge-a2-m2-cD_2dge-a2-m2-cB
29 2dge-a2-m1-cA 102 88 0.2442 0.2059 0.2386 1.0 2dge-a2-m1-cA_2dge-a2-m2-cB
30 2dge-a1-m1-cA 102 88 0.2442 0.2059 0.2386 1.0 2dge-a1-m1-cD_2dge-a1-m1-cA
31 1duw-a2-m2-cA 289 23 0.1047 0.0311 0.3913 5.2 1duw-a2-m1-cA_1duw-a2-m2-cA
32 1duw-a2-m1-cA 289 23 0.1047 0.0311 0.3913 5.2 1duw-a2-m1-cA_1duw-a2-m2-cA
33 5zsp-a1-m1-cB 381 27 0.1279 0.0289 0.4074 6.9 5zsp-a1-m1-cB_5zsp-a1-m1-cA
34 5zsp-a1-m1-cA 387 27 0.1279 0.0284 0.4074 6.9 5zsp-a1-m1-cB_5zsp-a1-m1-cA
35 3afe-a1-m1-cD 379 29 0.1279 0.0290 0.3793 8.9 3afe-a1-m1-cD_3afe-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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