Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=87)
ADGKAIFQQKGCGSCHQANVDTVGPSLKKIAQAYAGKEDQLIKFLKGEAPAIVDPAKEAI
MKPQLTMLKGLSDAELKALADFILSHK

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 3x15-a2-m1-cJ 87 87 1.0000 1.0000 1.0000 9.04e-59 3x15-a2-m1-cD_3x15-a2-m1-cJ
2 3x15-a2-m1-cD 87 87 1.0000 1.0000 1.0000 9.04e-59 3x15-a2-m1-cD_3x15-a2-m1-cJ
3 3x15-a1-m1-cG 87 87 1.0000 1.0000 1.0000 9.04e-59 3x15-a1-m1-cA_3x15-a1-m1-cG
4 3x15-a1-m1-cA 87 87 1.0000 1.0000 1.0000 9.04e-59 3x15-a1-m1-cA_3x15-a1-m1-cG
5 2zxy-a1-m2-cA 86 86 0.9885 1.0000 1.0000 3.74e-58 2zxy-a1-m1-cA_2zxy-a1-m2-cA
6 2zxy-a1-m1-cA 86 86 0.9885 1.0000 1.0000 3.74e-58 2zxy-a1-m1-cA_2zxy-a1-m2-cA
7 5z25-a1-m3-cA 96 50 0.5517 0.5000 0.9600 1.45e-29 5z25-a1-m2-cA_5z25-a1-m3-cA
8 5z25-a1-m3-cA 96 32 0.3678 0.3333 1.0000 4.37e-15 5z25-a1-m2-cA_5z25-a1-m3-cA
9 5z25-a1-m2-cA 96 50 0.5517 0.5000 0.9600 1.45e-29 5z25-a1-m2-cA_5z25-a1-m3-cA
10 5z25-a1-m2-cA 96 32 0.3678 0.3333 1.0000 4.37e-15 5z25-a1-m2-cA_5z25-a1-m3-cA
11 3x39-a2-m3-cB 82 89 0.3218 0.3415 0.3146 1.49e-07 3x39-a2-m1-cB_3x39-a2-m3-cB
12 3x39-a2-m1-cB 82 89 0.3218 0.3415 0.3146 1.49e-07 3x39-a2-m1-cB_3x39-a2-m3-cB
13 4zid-a1-m2-cA 80 83 0.3333 0.3625 0.3494 3.94e-07 4zid-a1-m1-cA_4zid-a1-m2-cA
14 4zid-a1-m1-cA 80 83 0.3333 0.3625 0.3494 3.94e-07 4zid-a1-m1-cA_4zid-a1-m2-cA
15 1ynr-a1-m1-cC 80 83 0.3333 0.3625 0.3494 3.94e-07 1ynr-a1-m1-cA_1ynr-a1-m1-cC, 1ynr-a1-m1-cD_1ynr-a1-m1-cC
16 1ynr-a1-m1-cA 80 83 0.3333 0.3625 0.3494 3.94e-07 1ynr-a1-m1-cA_1ynr-a1-m1-cC, 1ynr-a1-m1-cD_1ynr-a1-m1-cA
17 1ynr-a1-m1-cD 79 81 0.3218 0.3544 0.3457 4.69e-07 1ynr-a1-m1-cD_1ynr-a1-m1-cA, 1ynr-a1-m1-cD_1ynr-a1-m1-cC
18 5aus-a1-m1-cA 79 83 0.3333 0.3671 0.3494 1.51e-05 5aus-a1-m1-cA_5aus-a1-m1-cC
19 5aus-a1-m1-cC 83 86 0.3333 0.3494 0.3372 4.38e-05 5aus-a1-m1-cA_5aus-a1-m1-cC
20 5aur-a2-m1-cG 83 86 0.3333 0.3494 0.3372 4.38e-05 5aur-a2-m1-cE_5aur-a2-m1-cG
21 5aur-a2-m1-cE 83 86 0.3333 0.3494 0.3372 4.38e-05 5aur-a2-m1-cE_5aur-a2-m1-cG
22 1i8o-a2-m2-cA 113 34 0.1609 0.1239 0.4118 0.032 1i8o-a2-m1-cA_1i8o-a2-m2-cA
23 1i8o-a2-m1-cA 113 34 0.1609 0.1239 0.4118 0.032 1i8o-a2-m1-cA_1i8o-a2-m2-cA
24 7wsq-a1-m1-cF 418 97 0.3103 0.0646 0.2784 0.48 7wsq-a1-m1-cC_7wsq-a1-m1-cF
25 7wsq-a1-m1-cC 418 97 0.3103 0.0646 0.2784 0.48 7wsq-a1-m1-cC_7wsq-a1-m1-cF
26 2dge-a2-m2-cD 100 88 0.2414 0.2100 0.2386 1.1 2dge-a2-m2-cD_2dge-a2-m2-cB
27 2dge-a1-m1-cD 100 88 0.2414 0.2100 0.2386 1.1 2dge-a1-m1-cD_2dge-a1-m1-cA
28 2dge-a2-m2-cB 102 88 0.2414 0.2059 0.2386 1.1 2dge-a2-m1-cA_2dge-a2-m2-cB, 2dge-a2-m2-cD_2dge-a2-m2-cB
29 2dge-a2-m1-cA 102 88 0.2414 0.2059 0.2386 1.1 2dge-a2-m1-cA_2dge-a2-m2-cB
30 2dge-a1-m1-cA 102 88 0.2414 0.2059 0.2386 1.1 2dge-a1-m1-cD_2dge-a1-m1-cA
31 1duw-a2-m2-cA 289 23 0.1034 0.0311 0.3913 5.8 1duw-a2-m1-cA_1duw-a2-m2-cA
32 1duw-a2-m1-cA 289 23 0.1034 0.0311 0.3913 5.8 1duw-a2-m1-cA_1duw-a2-m2-cA
33 5zsp-a1-m1-cB 381 27 0.1264 0.0289 0.4074 7.0 5zsp-a1-m1-cB_5zsp-a1-m1-cA
34 5zsp-a1-m1-cA 387 27 0.1264 0.0284 0.4074 7.1 5zsp-a1-m1-cB_5zsp-a1-m1-cA
35 4rqo-a1-m1-cA 426 55 0.1724 0.0352 0.2727 8.0 4rqo-a1-m1-cA_4rqo-a1-m1-cB
36 4rqo-a1-m1-cB 429 55 0.1724 0.0350 0.2727 8.0 4rqo-a1-m1-cA_4rqo-a1-m1-cB
37 3afe-a1-m1-cD 379 29 0.1264 0.0290 0.3793 8.4 3afe-a1-m1-cD_3afe-a1-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600