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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
ADLKKKVRKLNSKAGQMKMDLHDLAEGLPTDYENLVETAEKTYEIFRELDQLKKKLNIWE
E

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3csx-a2-m1-cB 71 61 1.0000 0.8592 1.0000 2.78e-39 3csx-a2-m2-cA_3csx-a2-m1-cB
2 3csx-a1-m1-cB 71 61 1.0000 0.8592 1.0000 2.78e-39 3csx-a1-m1-cA_3csx-a1-m1-cB
3 3csx-a2-m2-cA 61 61 1.0000 1.0000 1.0000 3.08e-39 3csx-a2-m2-cA_3csx-a2-m1-cB
4 3csx-a1-m1-cA 61 61 1.0000 1.0000 1.0000 3.08e-39 3csx-a1-m1-cA_3csx-a1-m1-cB
5 2js5-a1-m1-cB 71 53 0.4918 0.4225 0.5660 6.98e-17 2js5-a1-m1-cA_2js5-a1-m1-cB
6 2js5-a1-m1-cA 71 53 0.4918 0.4225 0.5660 6.98e-17 2js5-a1-m1-cA_2js5-a1-m1-cB
7 5dko-a1-m2-cA 245 26 0.1475 0.0367 0.3462 7.4 5dko-a1-m1-cA_5dko-a1-m2-cA
8 5dko-a1-m1-cA 245 26 0.1475 0.0367 0.3462 7.4 5dko-a1-m1-cA_5dko-a1-m2-cA
9 6gqd-a1-m2-cA 344 36 0.1967 0.0349 0.3333 7.8 6gqd-a1-m1-cA_6gqd-a1-m2-cA
10 6gqd-a1-m1-cA 344 36 0.1967 0.0349 0.3333 7.8 6gqd-a1-m1-cA_6gqd-a1-m2-cA
11 5gnp-a1-m2-cA 245 32 0.1639 0.0408 0.3125 8.4 5gnp-a1-m1-cA_5gnp-a1-m2-cA
12 5gnp-a1-m1-cA 245 32 0.1639 0.0408 0.3125 8.4 5gnp-a1-m1-cA_5gnp-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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