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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
ADTMTFTAKNGNVTFDHKKHQTIVPDCAVCHGKTPGKIEGFGKEMAHGKSCKGCHEEMKK
GPTKCGECHKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3bxu-a1-m1-cB 71 71 1.0000 1.0000 1.0000 1.17e-46 3bxu-a1-m1-cA_3bxu-a1-m1-cB
2 3bxu-a1-m1-cA 71 71 1.0000 1.0000 1.0000 1.17e-46 3bxu-a1-m1-cA_3bxu-a1-m1-cB
3 3h33-a2-m2-cA 72 69 0.5775 0.5694 0.5942 8.91e-25 3h33-a2-m2-cA_3h33-a2-m1-cA
4 3h33-a2-m1-cA 72 69 0.5775 0.5694 0.5942 8.91e-25 3h33-a2-m2-cA_3h33-a2-m1-cA
5 1czj-a1-m2-cA 110 93 0.4085 0.2636 0.3118 5.69e-04 1czj-a1-m1-cA_1czj-a1-m2-cA
6 1czj-a1-m1-cA 110 93 0.4085 0.2636 0.3118 5.69e-04 1czj-a1-m1-cA_1czj-a1-m2-cA
7 3ov0-a2-m4-cA 318 57 0.2676 0.0597 0.3333 0.52 3ov0-a2-m2-cA_3ov0-a2-m4-cA
8 3ov0-a2-m4-cA 318 65 0.2817 0.0629 0.3077 3.5 3ov0-a2-m2-cA_3ov0-a2-m4-cA
9 3ov0-a2-m4-cA 318 74 0.3099 0.0692 0.2973 9.9 3ov0-a2-m2-cA_3ov0-a2-m4-cA
10 3ov0-a2-m2-cA 318 57 0.2676 0.0597 0.3333 0.52 3ov0-a2-m2-cA_3ov0-a2-m4-cA
11 3ov0-a2-m2-cA 318 65 0.2817 0.0629 0.3077 3.5 3ov0-a2-m2-cA_3ov0-a2-m4-cA
12 3ov0-a2-m2-cA 318 74 0.3099 0.0692 0.2973 9.9 3ov0-a2-m2-cA_3ov0-a2-m4-cA
13 6l4g-a1-m1-cB 282 29 0.1690 0.0426 0.4138 1.8 6l4g-a1-m1-cA_6l4g-a1-m1-cB
14 6l4b-a3-m3-cD 282 29 0.1690 0.0426 0.4138 1.8 6l4b-a3-m1-cC_6l4b-a3-m3-cD
15 6l4b-a3-m1-cC 282 29 0.1690 0.0426 0.4138 1.8 6l4b-a3-m1-cC_6l4b-a3-m3-cD
16 6l4g-a1-m1-cA 278 29 0.1690 0.0432 0.4138 2.0 6l4g-a1-m1-cA_6l4g-a1-m1-cB
17 3ouq-a2-m2-cA 159 65 0.2817 0.1258 0.3077 2.7 3ouq-a2-m1-cA_3ouq-a2-m2-cA
18 3ouq-a2-m1-cA 159 65 0.2817 0.1258 0.3077 2.7 3ouq-a2-m1-cA_3ouq-a2-m2-cA
19 4np6-a2-m1-cC 211 38 0.1972 0.0664 0.3684 2.9 4np6-a2-m1-cD_4np6-a2-m1-cC
20 4np6-a2-m1-cD 206 38 0.1972 0.0680 0.3684 2.9 4np6-a2-m1-cD_4np6-a2-m1-cC
21 6zmm-a1-m1-cB 252 29 0.1549 0.0437 0.3793 3.3 6zmm-a1-m1-cA_6zmm-a1-m1-cB
22 6zmm-a1-m1-cA 251 29 0.1549 0.0438 0.3793 3.4 6zmm-a1-m1-cA_6zmm-a1-m1-cB
23 6y7f-a1-m1-cA 254 26 0.1831 0.0512 0.5000 3.8 6y7f-a1-m1-cA_6y7f-a1-m1-cB
24 6y7f-a1-m1-cB 256 26 0.1831 0.0508 0.5000 3.8 6y7f-a1-m1-cA_6y7f-a1-m1-cB
25 1duw-a2-m2-cA 289 51 0.2535 0.0623 0.3529 4.4 1duw-a2-m1-cA_1duw-a2-m2-cA
26 1duw-a2-m1-cA 289 51 0.2535 0.0623 0.3529 4.4 1duw-a2-m1-cA_1duw-a2-m2-cA
27 3nr9-a2-m3-cC 347 14 0.1268 0.0259 0.6429 5.4 3nr9-a2-m1-cB_3nr9-a2-m3-cC
28 3nr9-a2-m1-cB 347 14 0.1268 0.0259 0.6429 5.4 3nr9-a2-m1-cB_3nr9-a2-m3-cC
29 4ulv-a1-m1-cB 128 13 0.1408 0.0781 0.7692 6.3 4ulv-a1-m1-cA_4ulv-a1-m1-cB
30 4ulv-a1-m1-cA 128 13 0.1408 0.0781 0.7692 6.3 4ulv-a1-m1-cA_4ulv-a1-m1-cB
31 1zzh-a3-m1-cA 297 34 0.1408 0.0337 0.2941 6.4 1zzh-a3-m1-cA_1zzh-a3-m1-cD
32 1zzh-a3-m1-cD 298 34 0.1408 0.0336 0.2941 6.4 1zzh-a3-m1-cA_1zzh-a3-m1-cD, 1zzh-a3-m1-cD_1zzh-a3-m1-cC
33 1zzh-a3-m1-cC 307 34 0.1408 0.0326 0.2941 6.4 1zzh-a3-m1-cD_1zzh-a3-m1-cC
34 2ccy-a1-m1-cB 127 15 0.1408 0.0787 0.6667 7.5 2ccy-a1-m1-cA_2ccy-a1-m1-cB
35 2ccy-a1-m1-cA 127 15 0.1408 0.0787 0.6667 7.5 2ccy-a1-m1-cA_2ccy-a1-m1-cB
36 7l7x-a1-m1-cAAA 394 16 0.1127 0.0203 0.5000 9.8 7l7x-a1-m1-cAAA_7l7x-a1-m1-cBBB

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Reference:
Jacob Schwartz et al.

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