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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=57)
ADVCGEVAYIQSVVSDCHVPTEDVKTLLEIRKLFLEIQKLKVELQGLSKEFLEHILH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2yf2-a1-m1-cA 57 57 1.0000 1.0000 1.0000 1.18e-35 2yf2-a1-m1-cA_2yf2-a1-m1-cG
2 2yf2-a1-m1-cG 57 56 0.9825 0.9825 1.0000 1.04e-34 2yf2-a1-m1-cA_2yf2-a1-m1-cG
3 3q3j-a1-m4-cB 175 45 0.2632 0.0857 0.3333 0.34 3q3j-a1-m1-cB_3q3j-a1-m4-cB, 3q3j-a1-m2-cB_3q3j-a1-m4-cB, 3q3j-a1-m3-cB_3q3j-a1-m4-cB
4 3q3j-a1-m3-cB 175 45 0.2632 0.0857 0.3333 0.34 3q3j-a1-m3-cB_3q3j-a1-m4-cB
5 3q3j-a1-m2-cB 175 45 0.2632 0.0857 0.3333 0.34 3q3j-a1-m2-cB_3q3j-a1-m4-cB
6 3q3j-a1-m1-cB 175 45 0.2632 0.0857 0.3333 0.34 3q3j-a1-m1-cB_3q3j-a1-m4-cB
7 4rqo-a1-m1-cA 426 20 0.1930 0.0258 0.5500 6.2 4rqo-a1-m1-cA_4rqo-a1-m1-cB
8 2z3z-a1-m2-cA 651 37 0.2281 0.0200 0.3514 6.4 2z3z-a1-m1-cA_2z3z-a1-m2-cA
9 2z3z-a1-m1-cA 651 37 0.2281 0.0200 0.3514 6.4 2z3z-a1-m1-cA_2z3z-a1-m2-cA
10 4rqo-a1-m1-cB 429 20 0.1930 0.0256 0.5500 7.9 4rqo-a1-m1-cA_4rqo-a1-m1-cB
11 2iqq-a1-m1-cB 141 20 0.1930 0.0780 0.5500 9.7 2iqq-a1-m1-cA_2iqq-a1-m1-cB
12 2iqq-a1-m1-cA 141 20 0.1930 0.0780 0.5500 9.7 2iqq-a1-m1-cA_2iqq-a1-m1-cB
13 3zpg-a1-m2-cA 354 17 0.1930 0.0311 0.6471 9.9 3zpg-a1-m1-cA_3zpg-a1-m2-cA
14 3zpg-a1-m1-cA 354 17 0.1930 0.0311 0.6471 9.9 3zpg-a1-m1-cA_3zpg-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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