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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=25)
AEEQKKEIAYLKKKEILEKKKQEIA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1tgg-a1-m1-cB 25 25 1.0000 1.0000 1.0000 2.21e-08 1tgg-a1-m1-cA_1tgg-a1-m1-cB
2 1tgg-a1-m1-cA 25 25 1.0000 1.0000 1.0000 2.21e-08 1tgg-a1-m1-cA_1tgg-a1-m1-cB
3 1rh4-a1-m4-cA 30 29 0.8400 0.7000 0.7241 0.12 1rh4-a1-m2-cA_1rh4-a1-m4-cA
4 1rh4-a1-m2-cA 30 29 0.8400 0.7000 0.7241 0.12 1rh4-a1-m2-cA_1rh4-a1-m4-cA
5 2o6n-a1-m4-cA 31 28 0.8000 0.6452 0.7143 0.45 2o6n-a1-m2-cA_2o6n-a1-m4-cA
6 2o6n-a1-m2-cA 31 28 0.8000 0.6452 0.7143 0.45 2o6n-a1-m2-cA_2o6n-a1-m4-cA
7 4cpc-a2-m1-cB 144 20 0.4400 0.0764 0.5500 10.0 4cpc-a2-m1-cD_4cpc-a2-m1-cB

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Reference:
Jacob Schwartz et al.

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